RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SENP3-EIF4A1A0A087X0R7 540 aa22.68■■□□□ 1.22
UBC-208ENST00000540700 EXOC5O00471 708 aa22.68■■□□□ 1.22
UBC-208ENST00000540700 CARD10Q9BWT7 1032 aa22.67■■□□□ 1.22
UBC-208ENST00000540700 MTFR1LQ9H019 292 aa22.67■■□□□ 1.22
UBC-208ENST00000540700 BCL9O00512 1426 aa22.66■■□□□ 1.22
UBC-208ENST00000540700 HOXC9P31274 260 aa22.66■■□□□ 1.22
UBC-208ENST00000540700 ABCC6O95255 1503 aa22.66■■□□□ 1.22
UBC-208ENST00000540700 MAP2P11137 1827 aaKnown RBP22.66■■□□□ 1.22
UBC-208ENST00000540700 IP6K1Q92551 441 aa22.65■■□□□ 1.22
UBC-208ENST00000540700 RGPD5Q99666 1765 aa22.65■■□□□ 1.22
UBC-208ENST00000540700 PPP2R1AP30153 589 aa22.64■■□□□ 1.21
UBC-208ENST00000540700 ACSBG1Q96GR2 724 aa22.64■■□□□ 1.21
UBC-208ENST00000540700 PRKRIP1Q9H875 184 aaPredicted RBP22.64■■□□□ 1.21
UBC-208ENST00000540700 RTL1A6NKG5 1358 aa22.63■■□□□ 1.21
UBC-208ENST00000540700 HSP90AB2PQ58FF8 381 aa22.63■■□□□ 1.21
UBC-208ENST00000540700 AMPHP49418 695 aa22.62■■□□□ 1.21
UBC-208ENST00000540700 ARXQ96QS3 562 aa22.62■■□□□ 1.21
UBC-208ENST00000540700 SGIP1Q9BQI5 828 aa22.62■■□□□ 1.21
UBC-208ENST00000540700 FLT4P35916 1363 aa22.62■■□□□ 1.21
UBC-208ENST00000540700 PPM1GO15355 546 aaPredicted RBP22.61■■□□□ 1.21
UBC-208ENST00000540700 MTHFSP49914 203 aa22.61■■□□□ 1.21
UBC-208ENST00000540700 C1QTNF8P60827 252 aa22.6■■□□□ 1.21
UBC-208ENST00000540700 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
UBC-208ENST00000540700 WNK3Q9BYP7 1800 aa22.59■■□□□ 1.21
UBC-208ENST00000540700 RALBP1Q15311 655 aa22.59■■□□□ 1.21
UBC-208ENST00000540700 COL3A1P02461 1466 aaPredicted RBP22.59■■□□□ 1.21
UBC-208ENST00000540700 ERBB3P21860 1342 aa22.58■■□□□ 1.21
UBC-208ENST00000540700 INSRP06213 1382 aa22.58■■□□□ 1.21
UBC-208ENST00000540700 GPR162Q16538 588 aa22.57■■□□□ 1.2
UBC-208ENST00000540700 KLHL34Q8N239 644 aa22.57■■□□□ 1.2
UBC-208ENST00000540700 ANKRD24Q8TF21 1146 aa22.57■■□□□ 1.2
UBC-208ENST00000540700 TNS2Q63HR2 1409 aa22.57■■□□□ 1.2
UBC-208ENST00000540700 LTV1Q96GA3 475 aaPredicted RBP22.56■■□□□ 1.2
UBC-208ENST00000540700 ZNF827Q17R98 1081 aa22.55■■□□□ 1.2
UBC-208ENST00000540700 NLRP2Q9NX02 1062 aa22.55■■□□□ 1.2
UBC-208ENST00000540700 EIF4A2Q14240 407 aaKnown RBP22.54■■□□□ 1.2
UBC-208ENST00000540700 MYBBP1AQ9BQG0 1328 aaKnown RBP22.54■■□□□ 1.2
UBC-208ENST00000540700 PELP1Q8IZL8 1130 aaKnown RBP22.53■■□□□ 1.2
UBC-208ENST00000540700 RGPD2P0DJD1 1756 aa22.52■■□□□ 1.2
UBC-208ENST00000540700 GOLGB1Q14789 3259 aaKnown RBP22.51■■□□□ 1.19
UBC-208ENST00000540700 ANP32CO43423 234 aa22.51■■□□□ 1.19
UBC-208ENST00000540700 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
UBC-208ENST00000540700 IL2RBP14784 551 aa22.5■■□□□ 1.19
UBC-208ENST00000540700 IL13P35225 146 aa22.5■■□□□ 1.19
UBC-208ENST00000540700 CCDC184Q52MB2 194 aa22.5■■□□□ 1.19
UBC-208ENST00000540700 NBPF6Q5VWK0 638 aa22.5■■□□□ 1.19
UBC-208ENST00000540700 NBPF4Q96M43 638 aa22.5■■□□□ 1.19
UBC-208ENST00000540700 LRRC4BQ9NT99 713 aa22.5■■□□□ 1.19
UBC-208ENST00000540700 MAP3K5Q99683 1374 aa22.5■■□□□ 1.19
UBC-208ENST00000540700 FAM208AQ9UK61 1670 aaKnown RBP22.49■■□□□ 1.19
UBC-208ENST00000540700 NHSQ6T4R5 1651 aa22.49■■□□□ 1.19
UBC-208ENST00000540700 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
UBC-208ENST00000540700 USHBP1Q8N6Y0 703 aa22.48■■□□□ 1.19
UBC-208ENST00000540700 CHD4Q14839 1912 aa22.48■■□□□ 1.19
UBC-208ENST00000540700 EYA1Q99502 592 aa22.47■■□□□ 1.19
UBC-208ENST00000540700 CEP350Q5VT06 3117 aa22.47■■□□□ 1.19
UBC-208ENST00000540700 NCAPD2Q15021 1401 aa22.47■■□□□ 1.19
UBC-208ENST00000540700 POLD1P28340 1107 aa22.46■■□□□ 1.19
UBC-208ENST00000540700 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
UBC-208ENST00000540700 DIAPH1O60610 1272 aaKnown RBP22.44■■□□□ 1.18
UBC-208ENST00000540700 IGSF1Q8N6C5 1336 aa22.44■■□□□ 1.18
UBC-208ENST00000540700 AKT1S1Q96B36 256 aa22.44■■□□□ 1.18
UBC-208ENST00000540700 KCNQ4P56696 695 aa22.43■■□□□ 1.18
UBC-208ENST00000540700 DDX54Q8TDD1 881 aaKnown RBP22.43■■□□□ 1.18
UBC-208ENST00000540700 KAT6BQ8WYB5 2073 aa22.43■■□□□ 1.18
UBC-208ENST00000540700 AEBP1Q8IUX7 1158 aa22.42■■□□□ 1.18
UBC-208ENST00000540700 NLGN2Q8NFZ4 835 aa22.42■■□□□ 1.18
UBC-208ENST00000540700 BTAF1O14981 1849 aa22.41■■□□□ 1.18
UBC-208ENST00000540700 PNPLA7Q6ZV29 1317 aa22.41■■□□□ 1.18
UBC-208ENST00000540700 SLC16A10Q8TF71 515 aa22.41■■□□□ 1.18
UBC-208ENST00000540700 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
UBC-208ENST00000540700 SLC27A3Q5K4L6 730 aa22.4■■□□□ 1.18
UBC-208ENST00000540700 SYTL4Q96C24 671 aaPredicted RBP22.4■■□□□ 1.18
UBC-208ENST00000540700 CFAP53Q96M91 514 aa22.4■■□□□ 1.18
UBC-208ENST00000540700 MEGF6O75095 1541 aa22.4■■□□□ 1.18
UBC-208ENST00000540700 IFFO2Q5TF58 517 aa22.39■■□□□ 1.17
UBC-208ENST00000540700 MIER1Q8N108 512 aa22.38■■□□□ 1.17
UBC-208ENST00000540700 KDRP35968 1356 aa22.37■■□□□ 1.17
UBC-208ENST00000540700 U2SURPO15042 1029 aaKnown RBP22.36■■□□□ 1.17
UBC-208ENST00000540700 MSH5O43196 834 aa22.36■■□□□ 1.17
UBC-208ENST00000540700 HMOX1P09601 288 aa22.36■■□□□ 1.17
UBC-208ENST00000540700 SULT6B1Q6IMI4 303 aa22.36■■□□□ 1.17
UBC-208ENST00000540700 PRIM1P49642 420 aaKnown RBP22.35■■□□□ 1.17
UBC-208ENST00000540700 YBX3P16989 372 aaKnown RBP eCLIP22.34■■□□□ 1.174e-14■□□□□ 10.5
UBC-208ENST00000540700 GRIN3BO60391 1043 aa22.31■■□□□ 1.16
UBC-208ENST00000540700 RSPH6AQ9H0K4 717 aa22.31■■□□□ 1.16
UBC-208ENST00000540700 MRS2Q9HD23 443 aa22.31■■□□□ 1.16
UBC-208ENST00000540700 U2AF1L5P0DN76 240 aaPredicted RBP22.3■■□□□ 1.16
UBC-208ENST00000540700 U2AF1Q01081 240 aaKnown RBP eCLIP22.3■■□□□ 1.16
UBC-208ENST00000540700 MSL1Q68DK7 614 aa22.3■■□□□ 1.16
UBC-208ENST00000540700 CCNL1Q9UK58 526 aaPredicted RBP22.3■■□□□ 1.16
UBC-208ENST00000540700 NUDCQ9Y266 331 aa22.3■■□□□ 1.16
UBC-208ENST00000540700 SHANK3Q9BYB0 1731 aa22.3■■□□□ 1.16
UBC-208ENST00000540700 PNISRQ8TF01 805 aaKnown RBP22.28■■□□□ 1.16
UBC-208ENST00000540700 PKD1L3Q7Z443 1732 aa22.27■■□□□ 1.16
UBC-208ENST00000540700 COL23A1Q86Y22 540 aaPredicted RBP22.27■■□□□ 1.16
UBC-208ENST00000540700 RAPGEF4Q8WZA2 1011 aa22.27■■□□□ 1.16
UBC-208ENST00000540700 ADAMTS8Q9UP79 889 aa22.27■■□□□ 1.16
UBC-208ENST00000540700 TATP17735 454 aaPredicted RBP22.26■■□□□ 1.15
UBC-208ENST00000540700 ATP10DQ9P241 1426 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms