RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 SPON1Q9HCB6 807 aa12.45□□□□□ -0.42
LMO3-222ENST00000540445 PKD1L3Q7Z443 1732 aa12.45□□□□□ -0.42
LMO3-222ENST00000540445 NSD3Q9BZ95 1437 aa12.45□□□□□ -0.42
LMO3-222ENST00000540445 INSRP06213 1382 aa12.44□□□□□ -0.42
LMO3-222ENST00000540445 KIF24Q5T7B8 1368 aa12.44□□□□□ -0.42
LMO3-222ENST00000540445 ITGB4P16144 1822 aa12.44□□□□□ -0.42
LMO3-222ENST00000540445 SLC15A2Q16348 729 aa12.44□□□□□ -0.42
LMO3-222ENST00000540445 CGNL1Q0VF96 1302 aa12.43□□□□□ -0.42
LMO3-222ENST00000540445 HSP90AB2PQ58FF8 381 aa12.43□□□□□ -0.42
LMO3-222ENST00000540445 NBPF6Q5VWK0 638 aa12.43□□□□□ -0.42
LMO3-222ENST00000540445 NBPF4Q96M43 638 aa12.43□□□□□ -0.42
LMO3-222ENST00000540445 SMG6Q86US8 1419 aaKnown RBP12.43□□□□□ -0.42
LMO3-222ENST00000540445 NSD2O96028 1365 aa12.43□□□□□ -0.42
LMO3-222ENST00000540445 FLT4P35916 1363 aa12.43□□□□□ -0.42
LMO3-222ENST00000540445 TOGARAM1Q9Y4F4 1720 aa12.42□□□□□ -0.42
LMO3-222ENST00000540445 USHBP1Q8N6Y0 703 aa12.42□□□□□ -0.42
LMO3-222ENST00000540445 ZCRB1Q8TBF4 217 aaKnown RBP12.42□□□□□ -0.42
LMO3-222ENST00000540445 STK32BQ9NY57 414 aa12.42□□□□□ -0.42
LMO3-222ENST00000540445 NCAPD2Q15021 1401 aa12.42□□□□□ -0.42
LMO3-222ENST00000540445 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
LMO3-222ENST00000540445 RAPGEF4Q8WZA2 1011 aa12.41□□□□□ -0.42
LMO3-222ENST00000540445 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
LMO3-222ENST00000540445 LRRC4BQ9NT99 713 aa12.41□□□□□ -0.42
LMO3-222ENST00000540445 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
LMO3-222ENST00000540445 PTGER2P43116 358 aa12.4□□□□□ -0.42
LMO3-222ENST00000540445 TNNT2P45379 298 aaPredicted RBP12.4□□□□□ -0.42
LMO3-222ENST00000540445 PANK3Q9H999 370 aa12.4□□□□□ -0.42
LMO3-222ENST00000540445 EMILIN1Q9Y6C2 1016 aa12.4□□□□□ -0.42
LMO3-222ENST00000540445 ZBTB7AO95365 584 aa12.39□□□□□ -0.43
LMO3-222ENST00000540445 ZNF827Q17R98 1081 aa12.39□□□□□ -0.43
LMO3-222ENST00000540445 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
LMO3-222ENST00000540445 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
LMO3-222ENST00000540445 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
LMO3-222ENST00000540445 PPP1R1BQ9UD71 204 aaPredicted RBP12.38□□□□□ -0.43
LMO3-222ENST00000540445 C5P01031 1676 aa12.38□□□□□ -0.43
LMO3-222ENST00000540445 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
LMO3-222ENST00000540445 MTFR1LQ9H019 292 aa12.36□□□□□ -0.43
LMO3-222ENST00000540445 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
LMO3-222ENST00000540445 CHD4Q14839 1912 aa12.36□□□□□ -0.43
LMO3-222ENST00000540445 WASHC2AQ641Q2 1341 aa12.36□□□□□ -0.43
LMO3-222ENST00000540445 POLKQ9UBT6 870 aa12.35□□□□□ -0.43
LMO3-222ENST00000540445 KNSTRNQ9Y448 316 aa12.35□□□□□ -0.43
LMO3-222ENST00000540445 CYP27B1O15528 508 aa12.34□□□□□ -0.43
LMO3-222ENST00000540445 MORC1Q86VD1 984 aa12.34□□□□□ -0.43
LMO3-222ENST00000540445 PCDH11XQ9BZA7 1347 aa12.34□□□□□ -0.43
LMO3-222ENST00000540445 PCDH11YQ9BZA8 1340 aa12.34□□□□□ -0.43
LMO3-222ENST00000540445 KCNQ4P56696 695 aa12.33□□□□□ -0.44
LMO3-222ENST00000540445 UBR3Q6ZT12 1888 aa12.33□□□□□ -0.44
LMO3-222ENST00000540445 PNPLA7Q6ZV29 1317 aa12.33□□□□□ -0.44
LMO3-222ENST00000540445 MPRIPQ6WCQ1 1025 aa12.32□□□□□ -0.44
LMO3-222ENST00000540445 SLC16A10Q8TF71 515 aa12.32□□□□□ -0.44
LMO3-222ENST00000540445 EYA1Q99502 592 aa12.32□□□□□ -0.44
LMO3-222ENST00000540445 SPG7Q9UQ90 795 aa12.32□□□□□ -0.44
LMO3-222ENST00000540445 MAP3K5Q99683 1374 aa12.31□□□□□ -0.44
LMO3-222ENST00000540445 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
LMO3-222ENST00000540445 FHDC1Q9C0D6 1143 aaPredicted RBP12.31□□□□□ -0.44
LMO3-222ENST00000540445 C4BP0C0L5 1744 aa12.31□□□□□ -0.44
LMO3-222ENST00000540445 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
LMO3-222ENST00000540445 DCAF8L1A6NGE4 600 aa12.3□□□□□ -0.44
LMO3-222ENST00000540445 EIF4A2Q14240 407 aaKnown RBP12.3□□□□□ -0.44
LMO3-222ENST00000540445 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
LMO3-222ENST00000540445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.44
LMO3-222ENST00000540445 CCNL1Q9UK58 526 aaPredicted RBP12.3□□□□□ -0.44
LMO3-222ENST00000540445 KIF7Q2M1P5 1343 aa12.3□□□□□ -0.44
LMO3-222ENST00000540445 VIRMAQ69YN4 1812 aaKnown RBP12.3□□□□□ -0.44
LMO3-222ENST00000540445 ARXQ96QS3 562 aa12.29□□□□□ -0.44
LMO3-222ENST00000540445 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
LMO3-222ENST00000540445 UTRNP46939 3433 aa12.28□□□□□ -0.44
LMO3-222ENST00000540445 CNGB1Q14028 1251 aaPredicted RBP12.28□□□□□ -0.44
LMO3-222ENST00000540445 IGSF1Q8N6C5 1336 aa12.28□□□□□ -0.44
LMO3-222ENST00000540445 ZNF831Q5JPB2 1677 aa12.28□□□□□ -0.44
LMO3-222ENST00000540445 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
LMO3-222ENST00000540445 MSH5O43196 834 aa12.27□□□□□ -0.45
LMO3-222ENST00000540445 IFNL2Q8IZJ0 200 aa12.27□□□□□ -0.45
LMO3-222ENST00000540445 PHKG2P15735 406 aa12.26□□□□□ -0.45
LMO3-222ENST00000540445 YY1P25490 414 aa12.26□□□□□ -0.45
LMO3-222ENST00000540445 HMGB2P26583 209 aaKnown RBP12.26□□□□□ -0.45
LMO3-222ENST00000540445 COL23A1Q86Y22 540 aaPredicted RBP12.26□□□□□ -0.45
LMO3-222ENST00000540445 PIGBQ92521 554 aa12.26□□□□□ -0.45
LMO3-222ENST00000540445 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
LMO3-222ENST00000540445 SCN11AQ9UI33 1791 aa12.25□□□□□ -0.45
LMO3-222ENST00000540445 PLEKHO1Q53GL0 409 aaPredicted RBP12.25□□□□□ -0.45
LMO3-222ENST00000540445 CC2D1BQ5T0F9 858 aaKnown RBP12.25□□□□□ -0.45
LMO3-222ENST00000540445 SMARCC1Q92922 1105 aaPredicted RBP12.25□□□□□ -0.45
LMO3-222ENST00000540445 GOLGB1Q14789 3259 aaKnown RBP12.24□□□□□ -0.45
LMO3-222ENST00000540445 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
LMO3-222ENST00000540445 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
LMO3-222ENST00000540445 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
LMO3-222ENST00000540445 PER1O15534 1290 aaPredicted RBP12.23□□□□□ -0.45
LMO3-222ENST00000540445 POLD1P28340 1107 aa12.23□□□□□ -0.45
LMO3-222ENST00000540445 MTHFSP49914 203 aa12.23□□□□□ -0.45
LMO3-222ENST00000540445 SULT6B1Q6IMI4 303 aa12.23□□□□□ -0.45
LMO3-222ENST00000540445 HSP90AB1P08238 724 aaKnown RBP12.22□□□□□ -0.45
LMO3-222ENST00000540445 AMOTQ4VCS5 1084 aa12.22□□□□□ -0.45
LMO3-222ENST00000540445 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
LMO3-222ENST00000540445 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
LMO3-222ENST00000540445 KDM6AO15550 1401 aaPredicted RBP12.21□□□□□ -0.45
LMO3-222ENST00000540445 KDRP35968 1356 aa12.21□□□□□ -0.45
LMO3-222ENST00000540445 LOC102724428A0A0B4J2F2 783 aa12.21□□□□□ -0.45
LMO3-222ENST00000540445 SIK1P57059 783 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms