RNA–Protein interactions for RNA: ENST00000540256.1

PPFIBP1-211, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 424 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-211ENST00000540256 ZSCAN30Q86W11 494 aa8.82□□□□□ -1
PPFIBP1-211ENST00000540256 AFAP1Q8N556 730 aa8.82□□□□□ -1
PPFIBP1-211ENST00000540256 ANP32BQ92688 251 aaKnown RBP8.82□□□□□ -1
PPFIBP1-211ENST00000540256 KIF2CQ99661 725 aa8.82□□□□□ -1
PPFIBP1-211ENST00000540256 SLC12A5Q9H2X9 1139 aa8.82□□□□□ -1
PPFIBP1-211ENST00000540256 CWC22Q9HCG8 908 aaKnown RBP8.82□□□□□ -1
PPFIBP1-211ENST00000540256 CDC42BPGQ6DT37 1551 aa8.82□□□□□ -1
PPFIBP1-211ENST00000540256 QRICH2Q9H0J4 1663 aa8.81□□□□□ -1
PPFIBP1-211ENST00000540256 K7ELQ4 463 aaPredicted RBP8.81□□□□□ -1
PPFIBP1-211ENST00000540256 FCHSD2O94868 740 aa8.81□□□□□ -1
PPFIBP1-211ENST00000540256 HSP90AB1P08238 724 aaKnown RBP8.81□□□□□ -1
PPFIBP1-211ENST00000540256 U2AF1L5P0DN76 240 aaPredicted RBP8.81□□□□□ -1
PPFIBP1-211ENST00000540256 U2AF1Q01081 240 aaKnown RBP eCLIP8.81□□□□□ -1
PPFIBP1-211ENST00000540256 EXOSC9Q06265 439 aaKnown RBP8.81□□□□□ -1
PPFIBP1-211ENST00000540256 MTERF4Q7Z6M4 381 aaKnown RBP8.81□□□□□ -1
PPFIBP1-211ENST00000540256 PPLO60437 1756 aa8.81□□□□□ -1
PPFIBP1-211ENST00000540256 CAMSAP1Q5T5Y3 1602 aa8.8□□□□□ -1
PPFIBP1-211ENST00000540256 KIF3BO15066 747 aa8.8□□□□□ -1
PPFIBP1-211ENST00000540256 RABEP1Q15276 862 aa8.8□□□□□ -1
PPFIBP1-211ENST00000540256 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.8□□□□□ -1
PPFIBP1-211ENST00000540256 MFRPQ9BY79 579 aa8.8□□□□□ -1
PPFIBP1-211ENST00000540256 NOB1Q9ULX3 412 aaKnown RBP8.8□□□□□ -1
PPFIBP1-211ENST00000540256 TNNQ9UQP3 1299 aa8.8□□□□□ -1
PPFIBP1-211ENST00000540256 RRP7AQ9Y3A4 280 aaKnown RBP8.8□□□□□ -1
PPFIBP1-211ENST00000540256 ZBTB7BO15156 539 aaPredicted RBP8.79□□□□□ -1
PPFIBP1-211ENST00000540256 ZNF500O60304 480 aaPredicted RBP8.79□□□□□ -1
PPFIBP1-211ENST00000540256 RAPGEF3O95398 923 aa8.79□□□□□ -1
PPFIBP1-211ENST00000540256 NLRP6P59044 892 aa8.79□□□□□ -1
PPFIBP1-211ENST00000540256 NEUROD2Q15784 382 aa8.79□□□□□ -1
PPFIBP1-211ENST00000540256 ITPRIPQ8IWB1 547 aa8.79□□□□□ -1
PPFIBP1-211ENST00000540256 TMEM57Q8N5G2 664 aa8.79□□□□□ -1
PPFIBP1-211ENST00000540256 OTUD5Q96G74 571 aa8.79□□□□□ -1
PPFIBP1-211ENST00000540256 MS4A4AQ96JQ5 239 aa8.79□□□□□ -1
PPFIBP1-211ENST00000540256 PDLIM2Q96JY6 352 aa8.79□□□□□ -1
PPFIBP1-211ENST00000540256 GZF1Q9H116 711 aaPredicted RBP8.79□□□□□ -1
PPFIBP1-211ENST00000540256 PTCH1Q13635 1447 aa8.79□□□□□ -1
PPFIBP1-211ENST00000540256 ATAD2Q6PL18 1390 aa8.78□□□□□ -1
PPFIBP1-211ENST00000540256 CDC45O75419 566 aa8.78□□□□□ -1
PPFIBP1-211ENST00000540256 CYP2E1P05181 493 aaPredicted RBP8.78□□□□□ -1
PPFIBP1-211ENST00000540256 CSPP1Q1MSJ5 1256 aa8.78□□□□□ -1
PPFIBP1-211ENST00000540256 GAS2L3Q86XJ1 694 aa8.78□□□□□ -1
PPFIBP1-211ENST00000540256 FBXO22Q8NEZ5 403 aa8.78□□□□□ -1
PPFIBP1-211ENST00000540256 TERF2IPQ9NYB0 399 aa8.78□□□□□ -1
PPFIBP1-211ENST00000540256 ABCC3O15438 1527 aa8.78□□□□□ -1
PPFIBP1-211ENST00000540256 ANKRD26Q9UPS8 1709 aa8.77□□□□□ -1
PPFIBP1-211ENST00000540256 TULP4Q9NRJ4 1543 aa8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 BAG4O95429 457 aaKnown RBP8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 NASPP49321 788 aaPredicted RBP8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 HAP1P54257 671 aaPredicted RBP8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 MAMSTRQ6ZN01 415 aa8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 L3MBTL3Q96JM7 780 aaPredicted RBP8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 PKNOX2Q96KN3 472 aa8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 NOL7Q9UMY1 257 aaKnown RBP8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 CLTCQ00610 1675 aaKnown RBP8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 ERBB4Q15303 1308 aa8.77□□□□□ -1.01
PPFIBP1-211ENST00000540256 PIK3C2BO00750 1634 aa8.76□□□□□ -1.01
PPFIBP1-211ENST00000540256 NKX1-1Q15270 411 aaPredicted RBP8.76□□□□□ -1.01
PPFIBP1-211ENST00000540256 TBC1D9Q6ZT07 1266 aa8.76□□□□□ -1.01
PPFIBP1-211ENST00000540256 MRPL50Q8N5N7 158 aaKnown RBP8.76□□□□□ -1.01
PPFIBP1-211ENST00000540256 BCL2L13Q9BXK5 485 aa8.76□□□□□ -1.01
PPFIBP1-211ENST00000540256 SCUBE2Q9NQ36 999 aa8.76□□□□□ -1.01
PPFIBP1-211ENST00000540256 ABCC4O15439 1325 aa8.76□□□□□ -1.01
PPFIBP1-211ENST00000540256 UGGT1Q9NYU2 1555 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 DIAPH1O60610 1272 aaKnown RBP8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 ZNF853P0CG23 659 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 RIPK4P57078 832 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 GNAI1P63096 354 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 IL17RAQ96F46 866 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 API5Q9BZZ5 524 aaKnown RBP8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 ZMYND15Q9H091 742 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 DCTPP1Q9H773 170 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 IFT57Q9NWB7 429 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 TRAK1Q9UPV9 953 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 PREX1Q8TCU6 1659 aa8.75□□□□□ -1.01
PPFIBP1-211ENST00000540256 ARHGEF28Q8N1W1 1705 aaKnown RBP8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 SIGLEC1Q9BZZ2 1709 aa8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 NPATQ14207 1427 aa8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 EPB41L2O43491 1005 aaKnown RBP8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 VAMP4O75379 141 aa8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 MSNP26038 577 aaKnown RBP8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 MCM2P49736 904 aa8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 SPRYD3Q8NCJ5 442 aa8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 TSR2Q969E8 191 aaKnown RBP8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 LNPKQ9C0E8 428 aa8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 DDX49Q9Y6V7 483 aaKnown RBP8.74□□□□□ -1.01
PPFIBP1-211ENST00000540256 FAM135BQ49AJ0 1406 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 DYNC1I1O14576 645 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 FYB1O15117 783 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 MBD3O95983 291 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 LMOD3Q0VAK6 560 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 NFE2L2Q16236 605 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 ANKRD45Q5TZF3 282 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 KIAA1211Q6ZU35 1233 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 RPAP2Q8IXW5 612 aaPredicted RBP8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 USP26Q9BXU7 913 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 LMBRD1Q9NUN5 540 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 SLC52A1Q9NWF4 448 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 BOLA1Q9Y3E2 137 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 A0A1W2PP64 1363 aa8.73□□□□□ -1.01
PPFIBP1-211ENST00000540256 CPSF1Q10570 1443 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms