RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 BRWD3Q6RI45 1802 aa24.55■■□□□ 1.52
NEK2-205ENST00000540251 FAM98CQ17RN3 349 aaKnown RBP24.55■■□□□ 1.52
NEK2-205ENST00000540251 RAPGEF4Q8WZA2 1011 aa24.55■■□□□ 1.52
NEK2-205ENST00000540251 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
NEK2-205ENST00000540251 PNNQ9H307 717 aaKnown RBP24.54■■□□□ 1.52
NEK2-205ENST00000540251 PLEKHF1Q96S99 279 aa24.53■■□□□ 1.52
NEK2-205ENST00000540251 TNS2Q63HR2 1409 aa24.52■■□□□ 1.52
NEK2-205ENST00000540251 HMOX1P09601 288 aa24.52■■□□□ 1.52
NEK2-205ENST00000540251 WDR43Q15061 677 aaKnown RBP eCLIP24.52■■□□□ 1.52
NEK2-205ENST00000540251 ADAMTS8Q9UP79 889 aa24.52■■□□□ 1.52
NEK2-205ENST00000540251 AMOTQ4VCS5 1084 aa24.51■■□□□ 1.51
NEK2-205ENST00000540251 SEPT12Q8IYM1 358 aa24.5■■□□□ 1.51
NEK2-205ENST00000540251 RGS12O14924 1447 aa24.49■■□□□ 1.51
NEK2-205ENST00000540251 EXOC5O00471 708 aa24.49■■□□□ 1.51
NEK2-205ENST00000540251 PRKAR2BP31323 418 aa24.48■■□□□ 1.51
NEK2-205ENST00000540251 DDB1Q16531 1140 aa24.48■■□□□ 1.51
NEK2-205ENST00000540251 ZCRB1Q8TBF4 217 aaKnown RBP24.48■■□□□ 1.51
NEK2-205ENST00000540251 PLEKHO1Q53GL0 409 aaPredicted RBP24.47■■□□□ 1.51
NEK2-205ENST00000540251 SPG7Q9UQ90 795 aa24.47■■□□□ 1.51
NEK2-205ENST00000540251 BCL9O00512 1426 aa24.46■■□□□ 1.51
NEK2-205ENST00000540251 DLG5Q8TDM6 1919 aa24.44■■□□□ 1.5
NEK2-205ENST00000540251 PHACTR3Q96KR7 559 aa24.44■■□□□ 1.5
NEK2-205ENST00000540251 PCDH11XQ9BZA7 1347 aa24.44■■□□□ 1.5
NEK2-205ENST00000540251 PCDH11YQ9BZA8 1340 aa24.44■■□□□ 1.5
NEK2-205ENST00000540251 RUNDC1Q96C34 613 aa24.43■■□□□ 1.5
NEK2-205ENST00000540251 VIRMAQ69YN4 1812 aaKnown RBP24.43■■□□□ 1.5
NEK2-205ENST00000540251 ADAMTS7Q9UKP4 1686 aa24.43■■□□□ 1.5
NEK2-205ENST00000540251 NKX1-1Q15270 411 aaPredicted RBP24.42■■□□□ 1.5
NEK2-205ENST00000540251 GAS2L2Q8NHY3 880 aa24.41■■□□□ 1.5
NEK2-205ENST00000540251 CYP27B1O15528 508 aa24.4■■□□□ 1.5
NEK2-205ENST00000540251 MTHFSDQ2M296 383 aaKnown RBP24.4■■□□□ 1.5
NEK2-205ENST00000540251 NCBP3Q53F19 620 aaKnown RBP24.4■■□□□ 1.5
NEK2-205ENST00000540251 MARCH10Q8NA82 808 aaPredicted RBP24.4■■□□□ 1.5
NEK2-205ENST00000540251 SBF2Q86WG5 1849 aa24.4■■□□□ 1.5
NEK2-205ENST00000540251 PDE3BQ13370 1112 aa24.39■■□□□ 1.5
NEK2-205ENST00000540251 KRT27Q7Z3Y8 459 aa24.39■■□□□ 1.5
NEK2-205ENST00000540251 IFNL2Q8IZJ0 200 aa24.39■■□□□ 1.5
NEK2-205ENST00000540251 SCN11AQ9UI33 1791 aa24.39■■□□□ 1.5
NEK2-205ENST00000540251 NEFMP07197 916 aa24.38■■□□□ 1.49
NEK2-205ENST00000540251 PHKG2P15735 406 aa24.38■■□□□ 1.49
NEK2-205ENST00000540251 AKAP4Q5JQC9 854 aa24.37■■□□□ 1.49
NEK2-205ENST00000540251 FAM9BQ8IZU0 186 aa24.36■■□□□ 1.49
NEK2-205ENST00000540251 MAPK8IP3Q9UPT6 1336 aa24.36■■□□□ 1.49
NEK2-205ENST00000540251 A0A0G2JS52 829 aa24.35■■□□□ 1.49
NEK2-205ENST00000540251 HTATSF1O43719 755 aaKnown RBP24.35■■□□□ 1.49
NEK2-205ENST00000540251 MYT1Q01538 1121 aa24.35■■□□□ 1.49
NEK2-205ENST00000540251 NFE2L2Q16236 605 aa24.35■■□□□ 1.49
NEK2-205ENST00000540251 ZNF530Q6P9A1 599 aaPredicted RBP24.35■■□□□ 1.49
NEK2-205ENST00000540251 HSP90AB1P08238 724 aaKnown RBP24.35■■□□□ 1.49
NEK2-205ENST00000540251 TMPOP42166 694 aaKnown RBP24.34■■□□□ 1.49
NEK2-205ENST00000540251 DDX54Q8TDD1 881 aaKnown RBP24.34■■□□□ 1.49
NEK2-205ENST00000540251 ITGB4P16144 1822 aa24.33■■□□□ 1.49
NEK2-205ENST00000540251 C1orf141Q5JVX7 400 aa24.33■■□□□ 1.48
NEK2-205ENST00000540251 CCDC146Q8IYE0 955 aa24.33■■□□□ 1.48
NEK2-205ENST00000540251 NGEFQ8N5V2 710 aa24.33■■□□□ 1.48
NEK2-205ENST00000540251 TOGARAM1Q9Y4F4 1720 aa24.32■■□□□ 1.48
NEK2-205ENST00000540251 MAP3K5Q99683 1374 aa24.32■■□□□ 1.48
NEK2-205ENST00000540251 KAT6BQ8WYB5 2073 aa24.32■■□□□ 1.48
NEK2-205ENST00000540251 FAM196AQ6ZSG2 479 aa24.32■■□□□ 1.48
NEK2-205ENST00000540251 DCAF5Q96JK2 942 aa24.32■■□□□ 1.48
NEK2-205ENST00000540251 GNAT3A8MTJ3 354 aa24.31■■□□□ 1.48
NEK2-205ENST00000540251 CEMIPQ8WUJ3 1361 aa24.3■■□□□ 1.48
NEK2-205ENST00000540251 KDM6AO15550 1401 aaPredicted RBP24.3■■□□□ 1.48
NEK2-205ENST00000540251 NHSQ6T4R5 1651 aa24.3■■□□□ 1.48
NEK2-205ENST00000540251 DOT1LQ8TEK3 1739 aa24.3■■□□□ 1.48
NEK2-205ENST00000540251 SIPA1L3O60292 1781 aaPredicted RBP24.3■■□□□ 1.48
NEK2-205ENST00000540251 APAF1O14727 1248 aa24.29■■□□□ 1.48
NEK2-205ENST00000540251 MRC1P22897 1456 aa24.28■■□□□ 1.48
NEK2-205ENST00000540251 ERVV-2B6SEH9 535 aa24.28■■□□□ 1.48
NEK2-205ENST00000540251 CCDC27Q2M243 656 aa24.28■■□□□ 1.48
NEK2-205ENST00000540251 RNMTO43148 476 aaKnown RBP24.26■■□□□ 1.47
NEK2-205ENST00000540251 RIPK4P57078 832 aa24.26■■□□□ 1.47
NEK2-205ENST00000540251 LMOD3Q0VAK6 560 aa24.26■■□□□ 1.47
NEK2-205ENST00000540251 IL17REQ8NFR9 667 aa24.26■■□□□ 1.47
NEK2-205ENST00000540251 TRIM35Q9UPQ4 493 aa24.25■■□□□ 1.47
NEK2-205ENST00000540251 EP400Q96L91 3159 aa24.24■■□□□ 1.47
NEK2-205ENST00000540251 MPRIPQ6WCQ1 1025 aa24.23■■□□□ 1.47
NEK2-205ENST00000540251 LGR6Q9HBX8 967 aa24.23■■□□□ 1.47
NEK2-205ENST00000540251 FAM182BQ5T319 152 aa24.22■■□□□ 1.47
NEK2-205ENST00000540251 RTF1Q92541 710 aaKnown RBP24.22■■□□□ 1.47
NEK2-205ENST00000540251 BTAF1O14981 1849 aa24.2■■□□□ 1.46
NEK2-205ENST00000540251 BCL11BQ9C0K0 894 aaPredicted RBP24.2■■□□□ 1.46
NEK2-205ENST00000540251 TNS1Q9HBL0 1735 aaKnown RBP24.2■■□□□ 1.46
NEK2-205ENST00000540251 ILDR2Q71H61 639 aa24.19■■□□□ 1.46
NEK2-205ENST00000540251 SLC52A2Q9HAB3 445 aa24.19■■□□□ 1.46
NEK2-205ENST00000540251 RRP7AQ9Y3A4 280 aaKnown RBP24.19■■□□□ 1.46
NEK2-205ENST00000540251 PRIM1P49642 420 aaKnown RBP24.17■■□□□ 1.46
NEK2-205ENST00000540251 PAPPAQ13219 1627 aa24.17■■□□□ 1.46
NEK2-205ENST00000540251 ZNF521Q96K83 1311 aa24.17■■□□□ 1.46
NEK2-205ENST00000540251 RGPD3A6NKT7 1758 aaPredicted RBP24.16■■□□□ 1.46
NEK2-205ENST00000540251 RGPD4Q7Z3J3 1758 aa24.16■■□□□ 1.46
NEK2-205ENST00000540251 NEUROD2Q15784 382 aa24.16■■□□□ 1.46
NEK2-205ENST00000540251 MCM10Q7L590 875 aa24.16■■□□□ 1.46
NEK2-205ENST00000540251 CCDC125Q86Z20 511 aa24.16■■□□□ 1.46
NEK2-205ENST00000540251 WWC1Q8IX03 1113 aa24.16■■□□□ 1.46
NEK2-205ENST00000540251 BABAM1Q9NWV8 329 aa24.16■■□□□ 1.46
NEK2-205ENST00000540251 KCNQ2O43526 872 aa24.15■■□□□ 1.46
NEK2-205ENST00000540251 DCTN1Q14203 1278 aa24.15■■□□□ 1.46
NEK2-205ENST00000540251 CABP4P57796 275 aa24.14■■□□□ 1.46
NEK2-205ENST00000540251 NFATC2IPQ8NCF5 419 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms