RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 PXDNQ92626 1479 aa21.93■■□□□ 1.1
LTBR-207ENST00000539925 CRB1P82279 1406 aa21.93■■□□□ 1.1
LTBR-207ENST00000539925 MAP3K5Q99683 1374 aa21.93■■□□□ 1.1
LTBR-207ENST00000539925 PLEKHG2Q9H7P9 1386 aa21.93■■□□□ 1.1
LTBR-207ENST00000539925 SOS1Q07889 1333 aaPredicted RBP21.93■■□□□ 1.1
LTBR-207ENST00000539925 SPATA31A3Q5VYP0 1347 aa21.93■■□□□ 1.1
LTBR-207ENST00000539925 MVPQ14764 893 aaKnown RBP21.93■■□□□ 1.1
LTBR-207ENST00000539925 XIRP1Q702N8 1843 aaKnown RBP21.93■■□□□ 1.1
LTBR-207ENST00000539925 ZNF335Q9H4Z2 1342 aaPredicted RBP21.92■■□□□ 1.1
LTBR-207ENST00000539925 AMOTQ4VCS5 1084 aa21.92■■□□□ 1.1
LTBR-207ENST00000539925 DCTN1Q14203 1278 aa21.91■■□□□ 1.1
LTBR-207ENST00000539925 DDX19BQ9UMR2 479 aa21.91■■□□□ 1.1
LTBR-207ENST00000539925 MED1Q15648 1581 aaPredicted RBP21.91■■□□□ 1.1
LTBR-207ENST00000539925 BRINP3Q76B58 766 aa21.91■■□□□ 1.1
LTBR-207ENST00000539925 MCM10Q7L590 875 aa21.91■■□□□ 1.1
LTBR-207ENST00000539925 SLAIN2Q9P270 581 aa21.91■■□□□ 1.1
LTBR-207ENST00000539925 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
LTBR-207ENST00000539925 TRIM27P14373 513 aa21.89■■□□□ 1.1
LTBR-207ENST00000539925 PLEKHO1Q53GL0 409 aaPredicted RBP21.89■■□□□ 1.1
LTBR-207ENST00000539925 NBPF6Q5VWK0 638 aa21.89■■□□□ 1.1
LTBR-207ENST00000539925 ANKRD24Q8TF21 1146 aa21.89■■□□□ 1.1
LTBR-207ENST00000539925 NBPF4Q96M43 638 aa21.89■■□□□ 1.1
LTBR-207ENST00000539925 MRPL50Q8N5N7 158 aaKnown RBP21.88■■□□□ 1.09
LTBR-207ENST00000539925 ZBTB7CA1YPR0 619 aa21.88■■□□□ 1.09
LTBR-207ENST00000539925 RLBP1P12271 317 aa21.88■■□□□ 1.09
LTBR-207ENST00000539925 CHMP4AQ9BY43 222 aa21.88■■□□□ 1.09
LTBR-207ENST00000539925 CPDO75976 1380 aa21.87■■□□□ 1.09
LTBR-207ENST00000539925 API5Q9BZZ5 524 aaKnown RBP21.87■■□□□ 1.09
LTBR-207ENST00000539925 LRRC37A3O60309 1634 aa21.87■■□□□ 1.09
LTBR-207ENST00000539925 TSPYL6Q8N831 410 aa21.86■■□□□ 1.09
LTBR-207ENST00000539925 C8orf58Q8NAV2 365 aa21.86■■□□□ 1.09
LTBR-207ENST00000539925 TSPYL4Q9UJ04 414 aa21.86■■□□□ 1.09
LTBR-207ENST00000539925 CAMTA1Q9Y6Y1 1673 aa21.86■■□□□ 1.09
LTBR-207ENST00000539925 SOS2Q07890 1332 aaPredicted RBP21.86■■□□□ 1.09
LTBR-207ENST00000539925 ERBB3P21860 1342 aa21.85■■□□□ 1.09
LTBR-207ENST00000539925 AKAP4Q5JQC9 854 aa21.84■■□□□ 1.09
LTBR-207ENST00000539925 OVOS2A0A0G2JMS6 1433 aa21.84■■□□□ 1.09
LTBR-207ENST00000539925 TAF7Q15545 349 aaPredicted RBP21.83■■□□□ 1.09
LTBR-207ENST00000539925 RWDD1Q9H446 243 aaPredicted RBP21.83■■□□□ 1.09
LTBR-207ENST00000539925 RBM19Q9Y4C8 960 aaKnown RBP21.83■■□□□ 1.09
LTBR-207ENST00000539925 CEMIPQ8WUJ3 1361 aa21.82■■□□□ 1.08
LTBR-207ENST00000539925 ZC3H6P61129 1189 aaKnown RBP21.82■■□□□ 1.08
LTBR-207ENST00000539925 ITPRIPQ8IWB1 547 aa21.82■■□□□ 1.08
LTBR-207ENST00000539925 USHBP1Q8N6Y0 703 aa21.82■■□□□ 1.08
LTBR-207ENST00000539925 FAM208AQ9UK61 1670 aaKnown RBP21.8■■□□□ 1.08
LTBR-207ENST00000539925 ELL2O00472 640 aaPredicted RBP21.8■■□□□ 1.08
LTBR-207ENST00000539925 C1orf141Q5JVX7 400 aa21.8■■□□□ 1.08
LTBR-207ENST00000539925 DDX17Q92841 729 aaKnown RBP21.8■■□□□ 1.08
LTBR-207ENST00000539925 PTPRCP08575 1304 aa21.8■■□□□ 1.08
LTBR-207ENST00000539925 IL17REQ8NFR9 667 aa21.79■■□□□ 1.08
LTBR-207ENST00000539925 LRRC59Q96AG4 307 aaKnown RBP21.79■■□□□ 1.08
LTBR-207ENST00000539925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.79■■□□□ 1.08
LTBR-207ENST00000539925 AXIN2Q9Y2T1 843 aa21.79■■□□□ 1.08
LTBR-207ENST00000539925 LMO7Q8WWI1 1683 aa21.79■■□□□ 1.08
LTBR-207ENST00000539925 ABCC4O15439 1325 aa21.78■■□□□ 1.08
LTBR-207ENST00000539925 ZNF530Q6P9A1 599 aaPredicted RBP21.78■■□□□ 1.08
LTBR-207ENST00000539925 TMEM57Q8N5G2 664 aa21.78■■□□□ 1.08
LTBR-207ENST00000539925 RAPGEF4Q8WZA2 1011 aa21.78■■□□□ 1.08
LTBR-207ENST00000539925 TNNQ9UQP3 1299 aa21.78■■□□□ 1.08
LTBR-207ENST00000539925 CRYBG1Q9Y4K1 1723 aa21.77■■□□□ 1.08
LTBR-207ENST00000539925 COL18A1P39060 1754 aa21.76■■□□□ 1.07
LTBR-207ENST00000539925 HOXB7P09629 217 aa21.75■■□□□ 1.07
LTBR-207ENST00000539925 HDAC1Q13547 482 aaPredicted RBP21.75■■□□□ 1.07
LTBR-207ENST00000539925 ZBTB40Q9NUA8 1239 aa21.75■■□□□ 1.07
LTBR-207ENST00000539925 CCDC30Q5VVM6 783 aa21.75■■□□□ 1.07
LTBR-207ENST00000539925 TATP17735 454 aaPredicted RBP21.74■■□□□ 1.07
LTBR-207ENST00000539925 TEFQ10587 303 aa21.74■■□□□ 1.07
LTBR-207ENST00000539925 STK31Q9BXU1 1019 aa21.74■■□□□ 1.07
LTBR-207ENST00000539925 NLRP2Q9NX02 1062 aa21.74■■□□□ 1.07
LTBR-207ENST00000539925 CSB-PGBD3P0DP91 1061 aa21.73■■□□□ 1.07
LTBR-207ENST00000539925 SPG7Q9UQ90 795 aa21.73■■□□□ 1.07
LTBR-207ENST00000539925 PCDHB15Q9Y5E8 787 aa21.73■■□□□ 1.07
LTBR-207ENST00000539925 PLEKHG5O94827 1062 aa21.72■■□□□ 1.07
LTBR-207ENST00000539925 IGHDP01880 384 aa21.72■■□□□ 1.07
LTBR-207ENST00000539925 RGPD2P0DJD1 1756 aa21.72■■□□□ 1.07
LTBR-207ENST00000539925 NHSL1Q5SYE7 1610 aa21.72■■□□□ 1.07
LTBR-207ENST00000539925 INTS3Q68E01 1043 aaKnown RBP21.71■■□□□ 1.07
LTBR-207ENST00000539925 CABLES1Q8TDN4 633 aa21.71■■□□□ 1.07
LTBR-207ENST00000539925 RNMTO43148 476 aaKnown RBP21.7■■□□□ 1.06
LTBR-207ENST00000539925 PRDM11Q9NQV5 511 aa21.69■■□□□ 1.06
LTBR-207ENST00000539925 MIS18AQ9NYP9 233 aa21.69■■□□□ 1.06
LTBR-207ENST00000539925 ZBTB7BO15156 539 aaPredicted RBP21.69■■□□□ 1.06
LTBR-207ENST00000539925 SLC4A2P04920 1241 aa21.69■■□□□ 1.06
LTBR-207ENST00000539925 KRT24Q2M2I5 525 aa21.69■■□□□ 1.06
LTBR-207ENST00000539925 RGPD5Q99666 1765 aa21.68■■□□□ 1.06
LTBR-207ENST00000539925 HSP90AB1P08238 724 aaKnown RBP21.68■■□□□ 1.06
LTBR-207ENST00000539925 CACNA1FO60840 1977 aa21.67■■□□□ 1.06
LTBR-207ENST00000539925 WDR17Q8IZU2 1322 aa21.66■■□□□ 1.06
LTBR-207ENST00000539925 LGR6Q9HBX8 967 aa21.66■■□□□ 1.06
LTBR-207ENST00000539925 ADAMTS7Q9UKP4 1686 aa21.65■■□□□ 1.06
LTBR-207ENST00000539925 BTBD11A6QL63 1104 aa21.65■■□□□ 1.06
LTBR-207ENST00000539925 CHRNA2Q15822 529 aa21.65■■□□□ 1.06
LTBR-207ENST00000539925 IFNL2Q8IZJ0 200 aa21.65■■□□□ 1.06
LTBR-207ENST00000539925 PDE4AP27815 886 aa21.64■■□□□ 1.05
LTBR-207ENST00000539925 CCT4P50991 539 aaKnown RBP21.64■■□□□ 1.05
LTBR-207ENST00000539925 EIF4A1P60842 406 aaKnown RBP21.64■■□□□ 1.05
LTBR-207ENST00000539925 BACH2Q9BYV9 841 aa21.64■■□□□ 1.05
LTBR-207ENST00000539925 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
LTBR-207ENST00000539925 SMC5Q8IY18 1101 aa21.63■■□□□ 1.05
LTBR-207ENST00000539925 KDM3BQ7LBC6 1761 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms