RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PCDH11YQ9BZA8 1340 aa15.25■□□□□ 0.03
VTN-202ENST00000539746 IL2RBP14784 551 aa15.25■□□□□ 0.03
VTN-202ENST00000539746 CHRNA2Q15822 529 aa15.25■□□□□ 0.03
VTN-202ENST00000539746 MEX3CQ5U5Q3 659 aaKnown RBP15.25■□□□□ 0.03
VTN-202ENST00000539746 CFAP44Q96MT7 982 aa15.25■□□□□ 0.03
VTN-202ENST00000539746 BTG4Q9NY30 223 aa15.25■□□□□ 0.03
VTN-202ENST00000539746 AXIN2Q9Y2T1 843 aa15.25■□□□□ 0.03
VTN-202ENST00000539746 LMO7Q8WWI1 1683 aa15.25■□□□□ 0.03
VTN-202ENST00000539746 FAM83GA6ND36 823 aa15.24■□□□□ 0.03
VTN-202ENST00000539746 ZNF530Q6P9A1 599 aaPredicted RBP15.24■□□□□ 0.03
VTN-202ENST00000539746 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
VTN-202ENST00000539746 IFNL2Q8IZJ0 200 aa15.24■□□□□ 0.03
VTN-202ENST00000539746 TEFQ10587 303 aa15.23■□□□□ 0.03
VTN-202ENST00000539746 PHACTR3Q96KR7 559 aa15.23■□□□□ 0.03
VTN-202ENST00000539746 RCAN3Q9UKA8 241 aa15.23■□□□□ 0.03
VTN-202ENST00000539746 RRP7AQ9Y3A4 280 aaKnown RBP15.23■□□□□ 0.03
VTN-202ENST00000539746 COL18A1P39060 1754 aa15.23■□□□□ 0.03
VTN-202ENST00000539746 HMGB2P26583 209 aaKnown RBP15.22■□□□□ 0.03
VTN-202ENST00000539746 MTHFSDQ2M296 383 aaKnown RBP15.22■□□□□ 0.03
VTN-202ENST00000539746 TRMT2AQ8IZ69 625 aaKnown RBP15.22■□□□□ 0.03
VTN-202ENST00000539746 STRN4Q9NRL3 753 aa15.22■□□□□ 0.03
VTN-202ENST00000539746 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
VTN-202ENST00000539746 NWD2Q9ULI1 1742 aa15.22■□□□□ 0.03
VTN-202ENST00000539746 PARP4Q9UKK3 1724 aaKnown RBP15.21■□□□□ 0.03
VTN-202ENST00000539746 NGLY1Q96IV0 654 aa15.21■□□□□ 0.03
VTN-202ENST00000539746 DCAF5Q96JK2 942 aa15.21■□□□□ 0.03
VTN-202ENST00000539746 NUTM2BA6NNL0 878 aaPredicted RBP15.2■□□□□ 0.02
VTN-202ENST00000539746 NUTM2EB1AL46 878 aaPredicted RBP15.2■□□□□ 0.02
VTN-202ENST00000539746 ADAMTS2O95450 1211 aa15.2■□□□□ 0.02
VTN-202ENST00000539746 DUSP27Q5VZP5 1158 aa15.2■□□□□ 0.02
VTN-202ENST00000539746 NUTM2AQ8IVF1 878 aaPredicted RBP15.2■□□□□ 0.02
VTN-202ENST00000539746 ZCRB1Q8TBF4 217 aaKnown RBP15.2■□□□□ 0.02
VTN-202ENST00000539746 UNC5CLQ8IV45 518 aa15.19■□□□□ 0.02
VTN-202ENST00000539746 CHMP4BQ9H444 224 aaKnown RBP15.19■□□□□ 0.02
VTN-202ENST00000539746 IPO8O15397 1037 aaKnown RBP15.18■□□□□ 0.02
VTN-202ENST00000539746 TAF7Q15545 349 aaPredicted RBP15.18■□□□□ 0.02
VTN-202ENST00000539746 HOXB7P09629 217 aa15.17■□□□□ 0.02
VTN-202ENST00000539746 AAMPQ13685 434 aa15.17■□□□□ 0.02
VTN-202ENST00000539746 ALDH1L2Q3SY69 923 aa15.17■□□□□ 0.02
VTN-202ENST00000539746 BARGINQ6ZT62 677 aa15.17■□□□□ 0.02
VTN-202ENST00000539746 FNBP4Q8N3X1 1017 aaPredicted RBP15.17■□□□□ 0.02
VTN-202ENST00000539746 USHBP1Q8N6Y0 703 aa15.17■□□□□ 0.02
VTN-202ENST00000539746 SLIT2O94813 1529 aa15.17■□□□□ 0.02
VTN-202ENST00000539746 KIF16BQ96L93 1317 aa15.17■□□□□ 0.02
VTN-202ENST00000539746 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
VTN-202ENST00000539746 CEMIPQ8WUJ3 1361 aa15.16■□□□□ 0.02
VTN-202ENST00000539746 EXOC5O00471 708 aa15.16■□□□□ 0.02
VTN-202ENST00000539746 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
VTN-202ENST00000539746 HSPA1LP34931 641 aa15.16■□□□□ 0.02
VTN-202ENST00000539746 VPS72Q15906 364 aa15.16■□□□□ 0.02
VTN-202ENST00000539746 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
VTN-202ENST00000539746 CCDC9Q9Y3X0 531 aaKnown RBP15.16■□□□□ 0.02
VTN-202ENST00000539746 LAS1LQ9Y4W2 734 aaKnown RBP15.16■□□□□ 0.02
VTN-202ENST00000539746 ERVV-2B6SEH9 535 aa15.15■□□□□ 0.02
VTN-202ENST00000539746 CHL1O00533 1208 aa15.15■□□□□ 0.02
VTN-202ENST00000539746 LARP1Q6PKG0 1096 aaKnown RBP15.15■□□□□ 0.02
VTN-202ENST00000539746 C8orf37Q96NL8 207 aa15.15■□□□□ 0.02
VTN-202ENST00000539746 PLCH1Q4KWH8 1693 aa15.14■□□□□ 0.01
VTN-202ENST00000539746 ZNF853P0CG23 659 aa15.14■□□□□ 0.01
VTN-202ENST00000539746 PHKG2P15735 406 aa15.14■□□□□ 0.01
VTN-202ENST00000539746 TTC5Q8N0Z6 440 aa15.13■□□□□ 0.01
VTN-202ENST00000539746 FBXO41Q8TF61 875 aa15.13■□□□□ 0.01
VTN-202ENST00000539746 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
VTN-202ENST00000539746 USP21Q9UK80 565 aa15.13■□□□□ 0.01
VTN-202ENST00000539746 TRPC5Q9UL62 973 aaPredicted RBP15.13■□□□□ 0.01
VTN-202ENST00000539746 SPATA31A1Q5TZJ5 1347 aa15.13■□□□□ 0.01
VTN-202ENST00000539746 SPATA31A5Q5VU36 1347 aa15.13■□□□□ 0.01
VTN-202ENST00000539746 SPATA31A7Q8IWB4 1347 aa15.13■□□□□ 0.01
VTN-202ENST00000539746 NKX1-1Q15270 411 aaPredicted RBP15.12■□□□□ 0.01
VTN-202ENST00000539746 ZNF772Q68DY9 489 aaPredicted RBP15.12■□□□□ 0.01
VTN-202ENST00000539746 PELP1Q8IZL8 1130 aaKnown RBP15.12■□□□□ 0.01
VTN-202ENST00000539746 STK31Q9BXU1 1019 aa15.12■□□□□ 0.01
VTN-202ENST00000539746 PKD1L3Q7Z443 1732 aa15.12■□□□□ 0.01
VTN-202ENST00000539746 RNMTO43148 476 aaKnown RBP15.11■□□□□ 0.01
VTN-202ENST00000539746 CABP4P57796 275 aa15.11■□□□□ 0.01
VTN-202ENST00000539746 DDB1Q16531 1140 aa15.11■□□□□ 0.01
VTN-202ENST00000539746 MCM10Q7L590 875 aa15.11■□□□□ 0.01
VTN-202ENST00000539746 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.11■□□□□ 0.01
VTN-202ENST00000539746 MEGF6O75095 1541 aa15.11■□□□□ 0.01
VTN-202ENST00000539746 RGPD5Q99666 1765 aa15.11■□□□□ 0.01
VTN-202ENST00000539746 TNS2Q63HR2 1409 aa15.1■□□□□ 0.01
VTN-202ENST00000539746 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
VTN-202ENST00000539746 BRPF1P55201 1214 aaPredicted RBP15.1■□□□□ 0.01
VTN-202ENST00000539746 TWISTNBQ3B726 338 aaPredicted RBP15.1■□□□□ 0.01
VTN-202ENST00000539746 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
VTN-202ENST00000539746 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
VTN-202ENST00000539746 RRP1P56182 461 aaKnown RBP15.09■□□□□ 0.01
VTN-202ENST00000539746 CCDC30Q5VVM6 783 aa15.09■□□□□ 0.01
VTN-202ENST00000539746 SLC52A2Q9HAB3 445 aa15.09■□□□□ 0.01
VTN-202ENST00000539746 USP35Q9P2H5 1018 aa15.09■□□□□ 0.01
VTN-202ENST00000539746 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
VTN-202ENST00000539746 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
VTN-202ENST00000539746 EXOSC9Q06265 439 aaKnown RBP15.08■□□□□ 0
VTN-202ENST00000539746 PDE3AQ14432 1141 aa15.08■□□□□ 0
VTN-202ENST00000539746 ARHGAP45Q92619 1136 aa15.08■□□□□ 0
VTN-202ENST00000539746 SMC4Q9NTJ3 1288 aa15.08■□□□□ 0
VTN-202ENST00000539746 DISP2A7MBM2 1401 aa15.08■□□□□ 0
VTN-202ENST00000539746 NRAPQ86VF7 1730 aa15.07■□□□□ 0
VTN-202ENST00000539746 MPRIPQ6WCQ1 1025 aa15.07■□□□□ 0
VTN-202ENST00000539746 IL17REQ8NFR9 667 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms