RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 SLC16A10Q8TF71 515 aa8.85□□□□□ -0.99
USP30-210ENST00000539121 IP6K1Q92551 441 aa8.85□□□□□ -0.99
USP30-210ENST00000539121 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
USP30-210ENST00000539121 SLC12A5Q9H2X9 1139 aa8.85□□□□□ -0.99
USP30-210ENST00000539121 LTN1O94822 1766 aa8.85□□□□□ -0.99
USP30-210ENST00000539121 CHD4Q14839 1912 aa8.84□□□□□ -0.99
USP30-210ENST00000539121 CEP350Q5VT06 3117 aa8.84□□□□□ -0.99
USP30-210ENST00000539121 ACSBG1Q96GR2 724 aa8.84□□□□□ -0.99
USP30-210ENST00000539121 ARXQ96QS3 562 aa8.84□□□□□ -0.99
USP30-210ENST00000539121 BTAF1O14981 1849 aa8.84□□□□□ -0.99
USP30-210ENST00000539121 MYOM1P52179 1685 aa8.84□□□□□ -0.99
USP30-210ENST00000539121 PAPPAQ13219 1627 aa8.83□□□□□ -1
USP30-210ENST00000539121 FAM208AQ9UK61 1670 aaKnown RBP8.82□□□□□ -1
USP30-210ENST00000539121 ZNF784Q8NCA9 323 aaPredicted RBP8.82□□□□□ -1
USP30-210ENST00000539121 AKT1S1Q96B36 256 aa8.82□□□□□ -1
USP30-210ENST00000539121 LRRC4BQ9NT99 713 aa8.82□□□□□ -1
USP30-210ENST00000539121 A0A1W2PP64 1363 aa8.82□□□□□ -1
USP30-210ENST00000539121 QSER1Q2KHR3 1735 aa8.81□□□□□ -1
USP30-210ENST00000539121 HMGB2P26583 209 aaKnown RBP8.81□□□□□ -1
USP30-210ENST00000539121 ZNF827Q17R98 1081 aa8.81□□□□□ -1
USP30-210ENST00000539121 DDX54Q8TDD1 881 aaKnown RBP8.81□□□□□ -1
USP30-210ENST00000539121 COG3Q96JB2 828 aa8.81□□□□□ -1
USP30-210ENST00000539121 TESK2Q96S53 571 aa8.8□□□□□ -1
USP30-210ENST00000539121 ANKRD36BQ8N2N9 1353 aa8.8□□□□□ -1
USP30-210ENST00000539121 CGNL1Q0VF96 1302 aa8.8□□□□□ -1
USP30-210ENST00000539121 MAP3K19Q56UN5 1328 aa8.8□□□□□ -1
USP30-210ENST00000539121 TONSLQ96HA7 1378 aa8.79□□□□□ -1
USP30-210ENST00000539121 POLD1P28340 1107 aa8.79□□□□□ -1
USP30-210ENST00000539121 HOXC9P31274 260 aa8.79□□□□□ -1
USP30-210ENST00000539121 AMPHP49418 695 aa8.79□□□□□ -1
USP30-210ENST00000539121 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
USP30-210ENST00000539121 ZCRB1Q8TBF4 217 aaKnown RBP8.79□□□□□ -1
USP30-210ENST00000539121 ZBTB12Q9Y330 459 aaPredicted RBP8.79□□□□□ -1
USP30-210ENST00000539121 COL24A1Q17RW2 1714 aa8.79□□□□□ -1
USP30-210ENST00000539121 RTL1A6NKG5 1358 aa8.78□□□□□ -1
USP30-210ENST00000539121 ST20-MTHFSA0A0A6YYL1 179 aa8.78□□□□□ -1
USP30-210ENST00000539121 TFCP2L1Q9NZI6 479 aa8.78□□□□□ -1
USP30-210ENST00000539121 PNPLA7Q6ZV29 1317 aa8.78□□□□□ -1
USP30-210ENST00000539121 LY75O60449 1722 aa8.77□□□□□ -1
USP30-210ENST00000539121 GPR162Q16538 588 aa8.77□□□□□ -1.01
USP30-210ENST00000539121 SYTL4Q96C24 671 aaPredicted RBP8.77□□□□□ -1.01
USP30-210ENST00000539121 LTV1Q96GA3 475 aaPredicted RBP8.77□□□□□ -1.01
USP30-210ENST00000539121 C1QTNF8P60827 252 aa8.76□□□□□ -1.01
USP30-210ENST00000539121 NSD2O96028 1365 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 KIF24Q5T7B8 1368 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 USP47Q96K76 1375 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 FYB1O15117 783 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 GRIN3BO60391 1043 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 TMF1P82094 1093 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 NBPF6Q5VWK0 638 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 FLAD1Q8NFF5 587 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 RAPGEF4Q8WZA2 1011 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 NBPF4Q96M43 638 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 CCNL1Q9UK58 526 aaPredicted RBP8.75□□□□□ -1.01
USP30-210ENST00000539121 MEGF6O75095 1541 aa8.75□□□□□ -1.01
USP30-210ENST00000539121 DOT1LQ8TEK3 1739 aa8.74□□□□□ -1.01
USP30-210ENST00000539121 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
USP30-210ENST00000539121 RGPD2P0DJD1 1756 aa8.74□□□□□ -1.01
USP30-210ENST00000539121 SMG6Q86US8 1419 aaKnown RBP8.74□□□□□ -1.01
USP30-210ENST00000539121 FBLN1P23142 703 aa8.74□□□□□ -1.01
USP30-210ENST00000539121 TUBGCP6Q96RT7 1819 aa8.74□□□□□ -1.01
USP30-210ENST00000539121 INSRP06213 1382 aa8.73□□□□□ -1.01
USP30-210ENST00000539121 TATP17735 454 aaPredicted RBP8.73□□□□□ -1.01
USP30-210ENST00000539121 KCNQ4P56696 695 aa8.73□□□□□ -1.01
USP30-210ENST00000539121 RRS1Q15050 365 aaKnown RBP8.73□□□□□ -1.01
USP30-210ENST00000539121 COL23A1Q86Y22 540 aaPredicted RBP8.73□□□□□ -1.01
USP30-210ENST00000539121 PCDH11XQ9BZA7 1347 aa8.73□□□□□ -1.01
USP30-210ENST00000539121 PCDH11YQ9BZA8 1340 aa8.73□□□□□ -1.01
USP30-210ENST00000539121 KLHL34Q8N239 644 aa8.72□□□□□ -1.01
USP30-210ENST00000539121 NLGN2Q8NFZ4 835 aa8.72□□□□□ -1.01
USP30-210ENST00000539121 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
USP30-210ENST00000539121 GGNBP2Q9H3C7 697 aa8.72□□□□□ -1.01
USP30-210ENST00000539121 CD2APQ9Y5K6 639 aa8.72□□□□□ -1.01
USP30-210ENST00000539121 FLT4P35916 1363 aa8.72□□□□□ -1.01
USP30-210ENST00000539121 SENP3-EIF4A1A0A087X0R7 540 aa8.71□□□□□ -1.02
USP30-210ENST00000539121 GIGYF1O75420 1035 aaPredicted RBP8.71□□□□□ -1.02
USP30-210ENST00000539121 HSP90AB2PQ58FF8 381 aa8.71□□□□□ -1.02
USP30-210ENST00000539121 CYP27B1O15528 508 aa8.7□□□□□ -1.02
USP30-210ENST00000539121 NKX1-1Q15270 411 aaPredicted RBP8.7□□□□□ -1.02
USP30-210ENST00000539121 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
USP30-210ENST00000539121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.7□□□□□ -1.02
USP30-210ENST00000539121 TAF1LQ8IZX4 1826 aa8.7□□□□□ -1.02
USP30-210ENST00000539121 PALLDQ8WX93 1383 aa8.7□□□□□ -1.02
USP30-210ENST00000539121 NSD3Q9BZ95 1437 aa8.7□□□□□ -1.02
USP30-210ENST00000539121 C5P01031 1676 aa8.69□□□□□ -1.02
USP30-210ENST00000539121 YBX3P16989 372 aaKnown RBP eCLIP8.69□□□□□ -1.02
USP30-210ENST00000539121 MPRIPQ6WCQ1 1025 aa8.69□□□□□ -1.02
USP30-210ENST00000539121 NCAPD2Q15021 1401 aa8.69□□□□□ -1.02
USP30-210ENST00000539121 CARD14Q9BXL6 1004 aa8.68□□□□□ -1.02
USP30-210ENST00000539121 SPG7Q9UQ90 795 aa8.68□□□□□ -1.02
USP30-210ENST00000539121 PLEKHG2Q9H7P9 1386 aa8.68□□□□□ -1.02
USP30-210ENST00000539121 ITGB4P16144 1822 aa8.68□□□□□ -1.02
USP30-210ENST00000539121 KIF20BQ96Q89 1820 aa8.68□□□□□ -1.02
USP30-210ENST00000539121 SSFA2P28290 1259 aa8.67□□□□□ -1.02
USP30-210ENST00000539121 WASHC2AQ641Q2 1341 aa8.67□□□□□ -1.02
USP30-210ENST00000539121 MSL1Q68DK7 614 aa8.67□□□□□ -1.02
USP30-210ENST00000539121 PKD1L3Q7Z443 1732 aa8.67□□□□□ -1.02
USP30-210ENST00000539121 PIGBQ92521 554 aa8.67□□□□□ -1.02
USP30-210ENST00000539121 AK7Q96M32 723 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms