RNA–Protein interactions for RNA: ENST00000538413.5

LRTOMT-214, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2

Gene LRTOMT, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-214ENST00000538413 CARD11Q9BXL7 1154 aa19.85■□□□□ 0.77
LRTOMT-214ENST00000538413 CCNL1Q9UK58 526 aaPredicted RBP19.84■□□□□ 0.77
LRTOMT-214ENST00000538413 ZCRB1Q8TBF4 217 aaKnown RBP19.83■□□□□ 0.77
LRTOMT-214ENST00000538413 A0A1W2PP64 1363 aa19.83■□□□□ 0.76
LRTOMT-214ENST00000538413 COL24A1Q17RW2 1714 aa19.82■□□□□ 0.76
LRTOMT-214ENST00000538413 IFFO2Q5TF58 517 aa19.82■□□□□ 0.76
LRTOMT-214ENST00000538413 YBX3P16989 372 aaKnown RBP eCLIP19.81■□□□□ 0.76
LRTOMT-214ENST00000538413 NSD2O96028 1365 aa19.81■□□□□ 0.76
LRTOMT-214ENST00000538413 AMPHP49418 695 aa19.8■□□□□ 0.76
LRTOMT-214ENST00000538413 COG3Q96JB2 828 aa19.8■□□□□ 0.76
LRTOMT-214ENST00000538413 FAM208AQ9UK61 1670 aaKnown RBP19.8■□□□□ 0.76
LRTOMT-214ENST00000538413 SHANK3Q9BYB0 1731 aa19.79■□□□□ 0.76
LRTOMT-214ENST00000538413 MAP3K19Q56UN5 1328 aa19.79■□□□□ 0.76
LRTOMT-214ENST00000538413 HOXC9P31274 260 aa19.79■□□□□ 0.76
LRTOMT-214ENST00000538413 COL23A1Q86Y22 540 aaPredicted RBP19.79■□□□□ 0.76
LRTOMT-214ENST00000538413 PUS7Q96PZ0 661 aaKnown RBP19.79■□□□□ 0.76
LRTOMT-214ENST00000538413 USP47Q96K76 1375 aa19.79■□□□□ 0.76
LRTOMT-214ENST00000538413 TUBGCP6Q96RT7 1819 aa19.78■□□□□ 0.76
LRTOMT-214ENST00000538413 DOT1LQ8TEK3 1739 aa19.77■□□□□ 0.76
LRTOMT-214ENST00000538413 MSL1Q68DK7 614 aa19.77■□□□□ 0.76
LRTOMT-214ENST00000538413 LY75O60449 1722 aa19.76■□□□□ 0.75
LRTOMT-214ENST00000538413 HMGB2P26583 209 aaKnown RBP19.76■□□□□ 0.75
LRTOMT-214ENST00000538413 MEGF6O75095 1541 aa19.75■□□□□ 0.75
LRTOMT-214ENST00000538413 ATP10DQ9P241 1426 aa19.75■□□□□ 0.75
LRTOMT-214ENST00000538413 FLAD1Q8NFF5 587 aa19.74■□□□□ 0.75
LRTOMT-214ENST00000538413 CD2APQ9Y5K6 639 aa19.74■□□□□ 0.75
LRTOMT-214ENST00000538413 CGNL1Q0VF96 1302 aa19.74■□□□□ 0.75
LRTOMT-214ENST00000538413 FBLN1P23142 703 aa19.73■□□□□ 0.75
LRTOMT-214ENST00000538413 RAPGEF4Q8WZA2 1011 aa19.73■□□□□ 0.75
LRTOMT-214ENST00000538413 GPBP1L1Q9HC44 474 aaPredicted RBP19.73■□□□□ 0.75
LRTOMT-214ENST00000538413 NBPF6Q5VWK0 638 aa19.72■□□□□ 0.75
LRTOMT-214ENST00000538413 NBPF4Q96M43 638 aa19.72■□□□□ 0.75
LRTOMT-214ENST00000538413 RTL1A6NKG5 1358 aa19.71■□□□□ 0.75
LRTOMT-214ENST00000538413 USHBP1Q8N6Y0 703 aa19.7■□□□□ 0.74
LRTOMT-214ENST00000538413 SMG6Q86US8 1419 aaKnown RBP19.69■□□□□ 0.74
LRTOMT-214ENST00000538413 TATP17735 454 aaPredicted RBP19.69■□□□□ 0.74
LRTOMT-214ENST00000538413 RRS1Q15050 365 aaKnown RBP19.69■□□□□ 0.74
LRTOMT-214ENST00000538413 PALLDQ8WX93 1383 aa19.68■□□□□ 0.74
LRTOMT-214ENST00000538413 SLC24A1O60721 1099 aa19.67■□□□□ 0.74
LRTOMT-214ENST00000538413 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
LRTOMT-214ENST00000538413 ZNF526Q8TF50 670 aaPredicted RBP19.67■□□□□ 0.74
LRTOMT-214ENST00000538413 PCDH11XQ9BZA7 1347 aa19.67■□□□□ 0.74
LRTOMT-214ENST00000538413 PCDH11YQ9BZA8 1340 aa19.67■□□□□ 0.74
LRTOMT-214ENST00000538413 RGPD2P0DJD1 1756 aa19.66■□□□□ 0.74
LRTOMT-214ENST00000538413 HSPA6P17066 643 aa19.66■□□□□ 0.74
LRTOMT-214ENST00000538413 AK7Q96M32 723 aa19.66■□□□□ 0.74
LRTOMT-214ENST00000538413 TESK2Q96S53 571 aa19.66■□□□□ 0.74
LRTOMT-214ENST00000538413 ADCY9O60503 1353 aa19.65■□□□□ 0.74
LRTOMT-214ENST00000538413 C5P01031 1676 aa19.65■□□□□ 0.74
LRTOMT-214ENST00000538413 ST20-MTHFSA0A0A6YYL1 179 aa19.64■□□□□ 0.73
LRTOMT-214ENST00000538413 SMARCC1Q92922 1105 aaPredicted RBP19.64■□□□□ 0.73
LRTOMT-214ENST00000538413 TONSLQ96HA7 1378 aa19.64■□□□□ 0.73
LRTOMT-214ENST00000538413 FYB1O15117 783 aa19.63■□□□□ 0.73
LRTOMT-214ENST00000538413 GGNBP2Q9H3C7 697 aa19.63■□□□□ 0.73
LRTOMT-214ENST00000538413 IGSF1Q8N6C5 1336 aa19.62■□□□□ 0.73
LRTOMT-214ENST00000538413 INSRP06213 1382 aa19.61■□□□□ 0.73
LRTOMT-214ENST00000538413 PHF14O94880 888 aa19.61■□□□□ 0.73
LRTOMT-214ENST00000538413 HSP90AB2PQ58FF8 381 aa19.61■□□□□ 0.73
LRTOMT-214ENST00000538413 NSD3Q9BZ95 1437 aa19.6■□□□□ 0.73
LRTOMT-214ENST00000538413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.6■□□□□ 0.73
LRTOMT-214ENST00000538413 CYP27B1O15528 508 aa19.6■□□□□ 0.73
LRTOMT-214ENST00000538413 WWC3Q9ULE0 1092 aa19.6■□□□□ 0.73
LRTOMT-214ENST00000538413 AMIGO3Q86WK7 504 aa19.59■□□□□ 0.73
LRTOMT-214ENST00000538413 FLT4P35916 1363 aa19.58■□□□□ 0.73
LRTOMT-214ENST00000538413 C4BP0C0L5 1744 aa19.58■□□□□ 0.72
LRTOMT-214ENST00000538413 KIF24Q5T7B8 1368 aa19.57■□□□□ 0.72
LRTOMT-214ENST00000538413 SSFA2P28290 1259 aa19.57■□□□□ 0.72
LRTOMT-214ENST00000538413 PIGBQ92521 554 aa19.57■□□□□ 0.72
LRTOMT-214ENST00000538413 TAF1LQ8IZX4 1826 aa19.57■□□□□ 0.72
LRTOMT-214ENST00000538413 SMIM5Q71RC9 77 aa19.56■□□□□ 0.72
LRTOMT-214ENST00000538413 TMF1P82094 1093 aa19.55■□□□□ 0.72
LRTOMT-214ENST00000538413 LOC102724428A0A0B4J2F2 783 aa19.54■□□□□ 0.72
LRTOMT-214ENST00000538413 KIF3CO14782 793 aa19.54■□□□□ 0.72
LRTOMT-214ENST00000538413 SIK1P57059 783 aa19.54■□□□□ 0.72
LRTOMT-214ENST00000538413 SPG7Q9UQ90 795 aa19.54■□□□□ 0.72
LRTOMT-214ENST00000538413 NKX1-1Q15270 411 aaPredicted RBP19.53■□□□□ 0.72
LRTOMT-214ENST00000538413 LINC00116Q8NCU8 138 aa19.53■□□□□ 0.72
LRTOMT-214ENST00000538413 GNPATO15228 680 aa19.52■□□□□ 0.72
LRTOMT-214ENST00000538413 TMOD3Q9NYL9 352 aa19.52■□□□□ 0.72
LRTOMT-214ENST00000538413 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
LRTOMT-214ENST00000538413 UBR3Q6ZT12 1888 aa19.51■□□□□ 0.71
LRTOMT-214ENST00000538413 APLP1P51693 650 aa19.5■□□□□ 0.71
LRTOMT-214ENST00000538413 EMILIN1Q9Y6C2 1016 aa19.5■□□□□ 0.71
LRTOMT-214ENST00000538413 ITGB4P16144 1822 aa19.5■□□□□ 0.71
LRTOMT-214ENST00000538413 PPM1GO15355 546 aaPredicted RBP19.49■□□□□ 0.71
LRTOMT-214ENST00000538413 MMP10P09238 476 aa19.49■□□□□ 0.71
LRTOMT-214ENST00000538413 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
LRTOMT-214ENST00000538413 CDCA8Q53HL2 280 aa19.49■□□□□ 0.71
LRTOMT-214ENST00000538413 ITPK1Q13572 414 aa19.48■□□□□ 0.71
LRTOMT-214ENST00000538413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.48■□□□□ 0.71
LRTOMT-214ENST00000538413 ASAP1Q9ULH1 1129 aa19.48■□□□□ 0.71
LRTOMT-214ENST00000538413 PKD1L3Q7Z443 1732 aa19.48■□□□□ 0.71
LRTOMT-214ENST00000538413 NCAPD2Q15021 1401 aa19.46■□□□□ 0.71
LRTOMT-214ENST00000538413 TOMM70O94826 608 aa19.46■□□□□ 0.71
LRTOMT-214ENST00000538413 TGFB2P61812 414 aa19.46■□□□□ 0.71
LRTOMT-214ENST00000538413 IFNL2Q8IZJ0 200 aa19.46■□□□□ 0.71
LRTOMT-214ENST00000538413 BCS1LQ9Y276 419 aa19.46■□□□□ 0.71
LRTOMT-214ENST00000538413 CICQ96RK0 1608 aaPredicted RBP19.46■□□□□ 0.71
LRTOMT-214ENST00000538413 TRAPPC3LQ5T215 181 aa19.45■□□□□ 0.7
LRTOMT-214ENST00000538413 NLGN1Q8N2Q7 840 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms