RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CCDC192P0DO97 292 aa19.85■□□□□ 0.77
SCARB1-205ENST00000538291 ERLIN2O94905 339 aa19.84■□□□□ 0.77
SCARB1-205ENST00000538291 RPAP2Q8IXW5 612 aaPredicted RBP19.84■□□□□ 0.77
SCARB1-205ENST00000538291 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
SCARB1-205ENST00000538291 AIDAQ96BJ3 306 aa19.84■□□□□ 0.77
SCARB1-205ENST00000538291 ZSCAN31Q96LW9 406 aaPredicted RBP19.84■□□□□ 0.77
SCARB1-205ENST00000538291 WASF1Q92558 559 aa19.84■□□□□ 0.77
SCARB1-205ENST00000538291 BCL11BQ9C0K0 894 aaPredicted RBP19.84■□□□□ 0.77
SCARB1-205ENST00000538291 TNMDQ9H2S6 317 aa19.84■□□□□ 0.77
SCARB1-205ENST00000538291 TMOD3Q9NYL9 352 aa19.84■□□□□ 0.77
SCARB1-205ENST00000538291 CHD1LQ86WJ1 897 aa19.83■□□□□ 0.77
SCARB1-205ENST00000538291 CCDC85AQ96PX6 553 aaPredicted RBP19.83■□□□□ 0.77
SCARB1-205ENST00000538291 ZNF287Q9HBT7 754 aa19.83■□□□□ 0.77
SCARB1-205ENST00000538291 PDRG1Q9NUG6 133 aa19.83■□□□□ 0.77
SCARB1-205ENST00000538291 ABCF2Q9UG63 623 aa19.83■□□□□ 0.77
SCARB1-205ENST00000538291 ZPR1O75312 459 aa19.83■□□□□ 0.76
SCARB1-205ENST00000538291 METTL24Q5JXM2 366 aa19.83■□□□□ 0.76
SCARB1-205ENST00000538291 IL1RAPL2Q9NP60 686 aa19.82■□□□□ 0.76
SCARB1-205ENST00000538291 NOM1Q5C9Z4 860 aaKnown RBP19.82■□□□□ 0.76
SCARB1-205ENST00000538291 CWC27Q6UX04 472 aaKnown RBP19.82■□□□□ 0.76
SCARB1-205ENST00000538291 JAKMIP1Q96N16 626 aaKnown RBP19.82■□□□□ 0.76
SCARB1-205ENST00000538291 AKAP2Q9Y2D5 859 aa19.82■□□□□ 0.76
SCARB1-205ENST00000538291 IMMTQ16891 758 aaKnown RBP19.81■□□□□ 0.76
SCARB1-205ENST00000538291 K7ELQ4 463 aaPredicted RBP19.8■□□□□ 0.76
SCARB1-205ENST00000538291 NEFHP12036 1026 aa19.8■□□□□ 0.76
SCARB1-205ENST00000538291 NBPF8Q3BBV2 869 aa19.8■□□□□ 0.76
SCARB1-205ENST00000538291 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
SCARB1-205ENST00000538291 PTCD1O75127 700 aaKnown RBP19.8■□□□□ 0.76
SCARB1-205ENST00000538291 SKIDA1Q1XH10 827 aa19.8■□□□□ 0.76
SCARB1-205ENST00000538291 CAVIN4Q5BKX8 364 aa19.8■□□□□ 0.76
SCARB1-205ENST00000538291 CFAP45Q9UL16 551 aa19.8■□□□□ 0.76
SCARB1-205ENST00000538291 USP5P45974 858 aa19.8■□□□□ 0.76
SCARB1-205ENST00000538291 DNMBPQ6XZF7 1577 aa19.8■□□□□ 0.76
SCARB1-205ENST00000538291 IFIT1P09914 478 aaKnown RBP19.79■□□□□ 0.76
SCARB1-205ENST00000538291 LARP1Q6PKG0 1096 aaKnown RBP19.79■□□□□ 0.76
SCARB1-205ENST00000538291 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
SCARB1-205ENST00000538291 CBFA2T2O43439 604 aa19.79■□□□□ 0.76
SCARB1-205ENST00000538291 DESP17661 470 aa19.79■□□□□ 0.76
SCARB1-205ENST00000538291 TOPBP1Q92547 1522 aa19.79■□□□□ 0.76
SCARB1-205ENST00000538291 WDHD1O75717 1129 aaPredicted RBP19.78■□□□□ 0.76
SCARB1-205ENST00000538291 CCDC191Q8NCU4 936 aa19.78■□□□□ 0.76
SCARB1-205ENST00000538291 CCDC181Q5TID7 509 aa19.78■□□□□ 0.76
SCARB1-205ENST00000538291 SPATA32Q96LK8 384 aa19.78■□□□□ 0.76
SCARB1-205ENST00000538291 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
SCARB1-205ENST00000538291 MATR3P43243 847 aaKnown RBP eCLIP19.78■□□□□ 0.768e-7■■□□□ 13.5
SCARB1-205ENST00000538291 ZRSR2Q15696 482 aaKnown RBP19.77■□□□□ 0.76
SCARB1-205ENST00000538291 AMOTQ4VCS5 1084 aa19.77■□□□□ 0.76
SCARB1-205ENST00000538291 CRACR2BQ8N4Y2 399 aaPredicted RBP19.77■□□□□ 0.76
SCARB1-205ENST00000538291 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
SCARB1-205ENST00000538291 PDIA4P13667 645 aaKnown RBP19.77■□□□□ 0.76
SCARB1-205ENST00000538291 TMPOP42166 694 aaKnown RBP19.77■□□□□ 0.76
SCARB1-205ENST00000538291 DUSP27Q5VZP5 1158 aa19.77■□□□□ 0.75
SCARB1-205ENST00000538291 SPC24Q8NBT2 197 aa19.77■□□□□ 0.75
SCARB1-205ENST00000538291 ANKRD18AQ8IVF6 992 aa19.76■□□□□ 0.75
SCARB1-205ENST00000538291 CEP57L1Q8IYX8 460 aa19.76■□□□□ 0.75
SCARB1-205ENST00000538291 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
SCARB1-205ENST00000538291 H0YHG0 523 aa19.76■□□□□ 0.75
SCARB1-205ENST00000538291 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
SCARB1-205ENST00000538291 POLR3DP05423 398 aaPredicted RBP19.76■□□□□ 0.75
SCARB1-205ENST00000538291 KIF1BPQ96EK5 621 aa19.76■□□□□ 0.75
SCARB1-205ENST00000538291 PIBF1Q8WXW3 757 aa19.76■□□□□ 0.75
SCARB1-205ENST00000538291 TNIP1Q15025 636 aa19.75■□□□□ 0.75
SCARB1-205ENST00000538291 AXDND1Q5T1B0 1012 aaPredicted RBP19.75■□□□□ 0.75
SCARB1-205ENST00000538291 SEPT11Q9NVA2 429 aaKnown RBP19.75■□□□□ 0.75
SCARB1-205ENST00000538291 CEP131Q9UPN4 1083 aa19.75■□□□□ 0.75
SCARB1-205ENST00000538291 SEC63Q9UGP8 760 aaKnown RBP19.75■□□□□ 0.75
SCARB1-205ENST00000538291 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
SCARB1-205ENST00000538291 VSIG10Q8N0Z9 540 aa19.74■□□□□ 0.75
SCARB1-205ENST00000538291 HSP90AB3PQ58FF7 597 aa19.74■□□□□ 0.75
SCARB1-205ENST00000538291 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-205ENST00000538291 HECW1Q76N89 1606 aa19.74■□□□□ 0.75
SCARB1-205ENST00000538291 GOLGA6L10A6NI86 522 aa19.74■□□□□ 0.75
SCARB1-205ENST00000538291 TRIM21P19474 475 aaKnown RBP19.74■□□□□ 0.75
SCARB1-205ENST00000538291 SEPT7Q16181 437 aaKnown RBP19.74■□□□□ 0.75
SCARB1-205ENST00000538291 NUTM1Q86Y26 1132 aa19.74■□□□□ 0.75
SCARB1-205ENST00000538291 MKNK2Q9HBH9 465 aa19.74■□□□□ 0.75
SCARB1-205ENST00000538291 MAP7D2Q96T17 732 aa19.74■□□□□ 0.75
SCARB1-205ENST00000538291 ANKIB1Q9P2G1 1089 aa19.74■□□□□ 0.75
SCARB1-205ENST00000538291 RAB11FIP3O75154 756 aa19.73■□□□□ 0.75
SCARB1-205ENST00000538291 GLRX3O76003 335 aaKnown RBP19.73■□□□□ 0.75
SCARB1-205ENST00000538291 DAPK1P53355 1430 aa19.73■□□□□ 0.75
SCARB1-205ENST00000538291 MTERF4Q7Z6M4 381 aaKnown RBP19.73■□□□□ 0.75
SCARB1-205ENST00000538291 CWC15Q9P013 229 aaKnown RBP19.73■□□□□ 0.75
SCARB1-205ENST00000538291 HMGN5P82970 282 aaKnown RBP19.73■□□□□ 0.75
SCARB1-205ENST00000538291 TAF7Q15545 349 aaPredicted RBP19.73■□□□□ 0.75
SCARB1-205ENST00000538291 MIS18AQ9NYP9 233 aa19.73■□□□□ 0.75
SCARB1-205ENST00000538291 MCM10Q7L590 875 aa19.72■□□□□ 0.75
SCARB1-205ENST00000538291 WAPLQ7Z5K2 1190 aa19.72■□□□□ 0.75
SCARB1-205ENST00000538291 EXOC6BQ9Y2D4 811 aa19.72■□□□□ 0.75
SCARB1-205ENST00000538291 DZIP1Q86YF9 867 aaKnown RBP19.72■□□□□ 0.75
SCARB1-205ENST00000538291 MYD88Q99836 296 aa19.72■□□□□ 0.75
SCARB1-205ENST00000538291 ADAMTS2O95450 1211 aa19.72■□□□□ 0.75
SCARB1-205ENST00000538291 NEBLO76041 1014 aa19.71■□□□□ 0.75
SCARB1-205ENST00000538291 PHF8Q9UPP1 1060 aa19.71■□□□□ 0.75
SCARB1-205ENST00000538291 NESP48681 1621 aa19.71■□□□□ 0.75
SCARB1-205ENST00000538291 IFIT5Q13325 482 aaKnown RBP19.71■□□□□ 0.75
SCARB1-205ENST00000538291 MINDY4BA8MYZ0 360 aa19.71■□□□□ 0.75
SCARB1-205ENST00000538291 PPP1R12BO60237 982 aaPredicted RBP19.71■□□□□ 0.75
SCARB1-205ENST00000538291 NUP62CLQ9H1M0 184 aa19.7■□□□□ 0.74
SCARB1-205ENST00000538291 MPRIPQ6WCQ1 1025 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms