RNA–Protein interactions for RNA: ENST00000538243.1

KDM2B-207, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 4,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-207ENST00000538243 SPG7Q9UQ90 795 aa19.54■□□□□ 0.72
KDM2B-207ENST00000538243 EID1Q9Y6B2 187 aa19.54■□□□□ 0.72
KDM2B-207ENST00000538243 RAPGEF6Q8TEU7 1601 aa19.54■□□□□ 0.72
KDM2B-207ENST00000538243 KINO60870 393 aaKnown RBP19.53■□□□□ 0.72
KDM2B-207ENST00000538243 RBM25P49756 843 aaKnown RBP19.53■□□□□ 0.72
KDM2B-207ENST00000538243 GIMAP6Q6P9H5 292 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 C14orf93Q9H972 538 aaKnown RBP19.53■□□□□ 0.72
KDM2B-207ENST00000538243 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 DTNBO60941 627 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 CCDC183Q5T5S1 534 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 SRCIN1Q9C0H9 1055 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 PES1O00541 588 aaKnown RBP19.53■□□□□ 0.72
KDM2B-207ENST00000538243 SMC2O95347 1197 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 ANTXR1Q9H6X2 564 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 PODXL2Q9NZ53 605 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 PSMA5P28066 241 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 CHAMP1Q96JM3 812 aa19.53■□□□□ 0.72
KDM2B-207ENST00000538243 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.72
KDM2B-207ENST00000538243 PPP4R3BQ5MIZ7 849 aa19.52■□□□□ 0.72
KDM2B-207ENST00000538243 PHACTR3Q96KR7 559 aa19.52■□□□□ 0.72
KDM2B-207ENST00000538243 SPATA32Q96LK8 384 aa19.52■□□□□ 0.72
KDM2B-207ENST00000538243 PRPF40BQ6NWY9 871 aaKnown RBP19.52■□□□□ 0.71
KDM2B-207ENST00000538243 DDX11Q96FC9 970 aa19.52■□□□□ 0.71
KDM2B-207ENST00000538243 DNAJC2Q99543 621 aaKnown RBP19.52■□□□□ 0.71
KDM2B-207ENST00000538243 IDI1Q13907 227 aa19.51■□□□□ 0.71
KDM2B-207ENST00000538243 TFIP11Q9UBB9 837 aaKnown RBP19.51■□□□□ 0.71
KDM2B-207ENST00000538243 DYNC1I1O14576 645 aa19.51■□□□□ 0.71
KDM2B-207ENST00000538243 IGSF3O75054 1194 aa19.51■□□□□ 0.71
KDM2B-207ENST00000538243 LRRFIP2Q9Y608 721 aaKnown RBP19.51■□□□□ 0.71
KDM2B-207ENST00000538243 ZNF521Q96K83 1311 aa19.51■□□□□ 0.71
KDM2B-207ENST00000538243 VAMP4O75379 141 aa19.5■□□□□ 0.71
KDM2B-207ENST00000538243 PLEKHM2Q8IWE5 1019 aa19.5■□□□□ 0.71
KDM2B-207ENST00000538243 RTEL1-TNFRSF6BF6WH68 1400 aa19.5■□□□□ 0.71
KDM2B-207ENST00000538243 MAP3K11Q16584 847 aa19.5■□□□□ 0.71
KDM2B-207ENST00000538243 RIC3Q7Z5B4 369 aa19.5■□□□□ 0.71
KDM2B-207ENST00000538243 MRPL50Q8N5N7 158 aaKnown RBP19.5■□□□□ 0.71
KDM2B-207ENST00000538243 USP19O94966 1318 aa19.5■□□□□ 0.71
KDM2B-207ENST00000538243 ERICH4A6NGS2 130 aa19.49■□□□□ 0.71
KDM2B-207ENST00000538243 BLOC1S2Q6QNY1 142 aa19.49■□□□□ 0.71
KDM2B-207ENST00000538243 FAM177A1Q8N128 213 aaPredicted RBP19.49■□□□□ 0.71
KDM2B-207ENST00000538243 NUP160Q12769 1436 aa19.49■□□□□ 0.71
KDM2B-207ENST00000538243 IL16Q14005 1332 aa19.49■□□□□ 0.71
KDM2B-207ENST00000538243 RPGRIP1LQ68CZ1 1315 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 ZBTB7BO15156 539 aaPredicted RBP19.48■□□□□ 0.71
KDM2B-207ENST00000538243 AEBP1Q8IUX7 1158 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 SLC52A1Q9NWF4 448 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 CNPY2Q9Y2B0 182 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 APPP05067 770 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 ME1P48163 572 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 PKP1Q13835 747 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 SYNE3Q6ZMZ3 975 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 USP48Q86UV5 1035 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 GOLGA6L1Q8N7Z2 621 aa19.48■□□□□ 0.71
KDM2B-207ENST00000538243 MAGI2Q86UL8 1455 aa19.47■□□□□ 0.71
KDM2B-207ENST00000538243 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
KDM2B-207ENST00000538243 NOLC1Q14978 699 aaKnown RBP eCLIP19.47■□□□□ 0.71
KDM2B-207ENST00000538243 AACSQ86V21 672 aa19.47■□□□□ 0.71
KDM2B-207ENST00000538243 DENND4BO75064 1496 aaPredicted RBP19.47■□□□□ 0.71
KDM2B-207ENST00000538243 SYCP2Q9BX26 1530 aa19.47■□□□□ 0.71
KDM2B-207ENST00000538243 DDX58O95786 925 aaKnown RBP19.47■□□□□ 0.71
KDM2B-207ENST00000538243 MCM5P33992 734 aa19.47■□□□□ 0.71
KDM2B-207ENST00000538243 PDE1AP54750 535 aa19.47■□□□□ 0.71
KDM2B-207ENST00000538243 TRMT2AQ8IZ69 625 aaKnown RBP19.47■□□□□ 0.71
KDM2B-207ENST00000538243 PDILTQ8N807 584 aa19.47■□□□□ 0.71
KDM2B-207ENST00000538243 NUDT16Q96DE0 195 aaKnown RBP19.47■□□□□ 0.71
KDM2B-207ENST00000538243 CCDC61Q9Y6R9 512 aa19.46■□□□□ 0.71
KDM2B-207ENST00000538243 FSD2A1L4K1 749 aa19.46■□□□□ 0.71
KDM2B-207ENST00000538243 STX6O43752 255 aa19.46■□□□□ 0.71
KDM2B-207ENST00000538243 PPFIA3O75145 1194 aa19.46■□□□□ 0.71
KDM2B-207ENST00000538243 RASSF8Q8NHQ8 419 aa19.46■□□□□ 0.71
KDM2B-207ENST00000538243 CD2BP2O95400 341 aaKnown RBP19.46■□□□□ 0.71
KDM2B-207ENST00000538243 TEX35Q5T0J7 233 aa19.46■□□□□ 0.71
KDM2B-207ENST00000538243 CYB5RLQ6IPT4 315 aa19.46■□□□□ 0.71
KDM2B-207ENST00000538243 C17orf53Q8N3J3 647 aaPredicted RBP19.46■□□□□ 0.71
KDM2B-207ENST00000538243 ANKRD44Q8N8A2 993 aa19.46■□□□□ 0.71
KDM2B-207ENST00000538243 KDM5CP41229 1560 aa19.45■□□□□ 0.7
KDM2B-207ENST00000538243 USP26Q9BXU7 913 aa19.45■□□□□ 0.7
KDM2B-207ENST00000538243 STK11IPQ8N1F8 1099 aa19.45■□□□□ 0.7
KDM2B-207ENST00000538243 TCEANC2Q96MN5 208 aa19.45■□□□□ 0.7
KDM2B-207ENST00000538243 ZRANB1Q9UGI0 708 aa19.45■□□□□ 0.7
KDM2B-207ENST00000538243 TRIM35Q9UPQ4 493 aa19.45■□□□□ 0.7
KDM2B-207ENST00000538243 TSC1Q92574 1164 aa19.45■□□□□ 0.7
KDM2B-207ENST00000538243 ARHGAP45Q92619 1136 aa19.45■□□□□ 0.7
KDM2B-207ENST00000538243 TRMT1Q9NXH9 659 aaKnown RBP19.45■□□□□ 0.7
KDM2B-207ENST00000538243 LIMCH1Q9UPQ0 1083 aa19.45■□□□□ 0.7
KDM2B-207ENST00000538243 RAB11FIP3O75154 756 aa19.44■□□□□ 0.7
KDM2B-207ENST00000538243 ARGLU1Q9NWB6 273 aaPredicted RBP19.44■□□□□ 0.7
KDM2B-207ENST00000538243 NAT10Q9H0A0 1025 aaKnown RBP19.44■□□□□ 0.7
KDM2B-207ENST00000538243 DCTPP1Q9H773 170 aa19.44■□□□□ 0.7
KDM2B-207ENST00000538243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.44■□□□□ 0.7
KDM2B-207ENST00000538243 ATP2B1P20020 1258 aa19.43■□□□□ 0.7
KDM2B-207ENST00000538243 WASHC4Q2M389 1173 aa19.43■□□□□ 0.7
KDM2B-207ENST00000538243 CCDC34Q96HJ3 373 aa19.43■□□□□ 0.7
KDM2B-207ENST00000538243 TNNT1P13805 278 aa19.43■□□□□ 0.7
KDM2B-207ENST00000538243 ABTB2Q8N961 1025 aa19.43■□□□□ 0.7
KDM2B-207ENST00000538243 TTLL5Q6EMB2 1281 aa19.43■□□□□ 0.7
KDM2B-207ENST00000538243 CPLX2Q6PUV4 134 aaKnown RBP19.42■□□□□ 0.7
KDM2B-207ENST00000538243 NECAB1Q8N987 351 aa19.42■□□□□ 0.7
KDM2B-207ENST00000538243 NOL7Q9UMY1 257 aaKnown RBP19.42■□□□□ 0.7
KDM2B-207ENST00000538243 GJB2P29033 226 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms