RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 IGSF1Q8N6C5 1336 aa10.78□□□□□ -0.68
CIT-209ENST00000538073 ATRNO75882 1429 aa10.77□□□□□ -0.68
CIT-209ENST00000538073 GABBR2O75899 941 aa10.77□□□□□ -0.69
CIT-209ENST00000538073 EVA1CP58658 441 aa10.77□□□□□ -0.69
CIT-209ENST00000538073 VPS72Q15906 364 aa10.77□□□□□ -0.69
CIT-209ENST00000538073 NBPF6Q5VWK0 638 aa10.77□□□□□ -0.69
CIT-209ENST00000538073 CHADLQ6NUI6 762 aa10.77□□□□□ -0.69
CIT-209ENST00000538073 LTV1Q96GA3 475 aaPredicted RBP10.77□□□□□ -0.69
CIT-209ENST00000538073 NBPF4Q96M43 638 aa10.77□□□□□ -0.69
CIT-209ENST00000538073 STRN4Q9NRL3 753 aa10.77□□□□□ -0.69
CIT-209ENST00000538073 KDRP35968 1356 aa10.77□□□□□ -0.69
CIT-209ENST00000538073 EYA1Q99502 592 aa10.76□□□□□ -0.69
CIT-209ENST00000538073 CARD10Q9BWT7 1032 aa10.76□□□□□ -0.69
CIT-209ENST00000538073 MRS2Q9HD23 443 aa10.76□□□□□ -0.69
CIT-209ENST00000538073 SPATA31A5Q5VU36 1347 aa10.76□□□□□ -0.69
CIT-209ENST00000538073 SPATA31A7Q8IWB4 1347 aa10.76□□□□□ -0.69
CIT-209ENST00000538073 WNK3Q9BYP7 1800 aa10.75□□□□□ -0.69
CIT-209ENST00000538073 GLI3P10071 1580 aa10.75□□□□□ -0.69
CIT-209ENST00000538073 CSB-PGBD3P0DP91 1061 aa10.75□□□□□ -0.69
CIT-209ENST00000538073 ZNF772Q68DY9 489 aaPredicted RBP10.75□□□□□ -0.69
CIT-209ENST00000538073 POTEAQ6S8J7 498 aa10.75□□□□□ -0.69
CIT-209ENST00000538073 TOM1L2Q6ZVM7 507 aa10.75□□□□□ -0.69
CIT-209ENST00000538073 PNISRQ8TF01 805 aaKnown RBP10.75□□□□□ -0.69
CIT-209ENST00000538073 NLRP2Q9NX02 1062 aa10.75□□□□□ -0.69
CIT-209ENST00000538073 TRPC5Q9UL62 973 aaPredicted RBP10.75□□□□□ -0.69
CIT-209ENST00000538073 NUDCQ9Y266 331 aa10.75□□□□□ -0.69
CIT-209ENST00000538073 SPATA31A1Q5TZJ5 1347 aa10.75□□□□□ -0.69
CIT-209ENST00000538073 QTRT2Q9H974 415 aaKnown RBP10.74□□□□□ -0.69
CIT-209ENST00000538073 THRAP3Q9Y2W1 955 aaKnown RBP10.74□□□□□ -0.69
CIT-209ENST00000538073 PLEKHG2Q9H7P9 1386 aa10.74□□□□□ -0.69
CIT-209ENST00000538073 DISP2A7MBM2 1401 aa10.74□□□□□ -0.69
CIT-209ENST00000538073 USHBP1Q8N6Y0 703 aa10.73□□□□□ -0.69
CIT-209ENST00000538073 GJD4Q96KN9 370 aaPredicted RBP10.73□□□□□ -0.69
CIT-209ENST00000538073 PARP4Q9UKK3 1724 aaKnown RBP10.72□□□□□ -0.69
CIT-209ENST00000538073 U2SURPO15042 1029 aaKnown RBP10.72□□□□□ -0.69
CIT-209ENST00000538073 FCHSD2O94868 740 aa10.72□□□□□ -0.69
CIT-209ENST00000538073 SULT6B1Q6IMI4 303 aa10.72□□□□□ -0.69
CIT-209ENST00000538073 BARGINQ6ZT62 677 aa10.72□□□□□ -0.69
CIT-209ENST00000538073 AEBP1Q8IUX7 1158 aa10.72□□□□□ -0.69
CIT-209ENST00000538073 TCP11L2Q8N4U5 519 aa10.72□□□□□ -0.69
CIT-209ENST00000538073 RSPH6AQ9H0K4 717 aa10.72□□□□□ -0.69
CIT-209ENST00000538073 THSD7AQ9UPZ6 1657 aa10.72□□□□□ -0.69
CIT-209ENST00000538073 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
CIT-209ENST00000538073 MEGF6O75095 1541 aa10.71□□□□□ -0.69
CIT-209ENST00000538073 HMOX1P09601 288 aa10.71□□□□□ -0.69
CIT-209ENST00000538073 PRR29P0C7W0 189 aa10.71□□□□□ -0.69
CIT-209ENST00000538073 U2AF1L5P0DN76 240 aaPredicted RBP10.71□□□□□ -0.69
CIT-209ENST00000538073 U2AF1Q01081 240 aaKnown RBP eCLIP10.71□□□□□ -0.69
CIT-209ENST00000538073 WDR43Q15061 677 aaKnown RBP eCLIP10.71□□□□□ -0.69
CIT-209ENST00000538073 LHX8Q68G74 356 aa10.71□□□□□ -0.69
CIT-209ENST00000538073 PKD1L3Q7Z443 1732 aa10.71□□□□□ -0.69
CIT-209ENST00000538073 ADAMTS8Q9UP79 889 aa10.71□□□□□ -0.69
CIT-209ENST00000538073 OVOS2A0A0G2JMS6 1433 aa10.7□□□□□ -0.7
CIT-209ENST00000538073 IL2RBP14784 551 aa10.7□□□□□ -0.7
CIT-209ENST00000538073 CDCA7Q9BWT1 371 aaPredicted RBP10.7□□□□□ -0.7
CIT-209ENST00000538073 USP35Q9P2H5 1018 aa10.7□□□□□ -0.7
CIT-209ENST00000538073 CCDC9Q9Y3X0 531 aaKnown RBP10.7□□□□□ -0.7
CIT-209ENST00000538073 SHANK3Q9BYB0 1731 aa10.7□□□□□ -0.7
CIT-209ENST00000538073 LRRC37A3O60309 1634 aa10.69□□□□□ -0.7
CIT-209ENST00000538073 RBM6P78332 1123 aaKnown RBP10.69□□□□□ -0.7
CIT-209ENST00000538073 PLEKHF1Q96S99 279 aa10.69□□□□□ -0.7
CIT-209ENST00000538073 TATP17735 454 aaPredicted RBP10.68□□□□□ -0.7
CIT-209ENST00000538073 PRKAR2BP31323 418 aa10.68□□□□□ -0.7
CIT-209ENST00000538073 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
CIT-209ENST00000538073 RAPGEF4Q8WZA2 1011 aa10.68□□□□□ -0.7
CIT-209ENST00000538073 PNNQ9H307 717 aaKnown RBP10.68□□□□□ -0.7
CIT-209ENST00000538073 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.68□□□□□ -0.7
CIT-209ENST00000538073 FAM9BQ8IZU0 186 aa10.67□□□□□ -0.7
CIT-209ENST00000538073 TNS2Q63HR2 1409 aa10.67□□□□□ -0.7
CIT-209ENST00000538073 RXRBP28702 533 aa10.66□□□□□ -0.7
CIT-209ENST00000538073 RUNDC1Q96C34 613 aa10.66□□□□□ -0.7
CIT-209ENST00000538073 PHACTR3Q96KR7 559 aa10.66□□□□□ -0.7
CIT-209ENST00000538073 AMOTQ4VCS5 1084 aa10.65□□□□□ -0.7
CIT-209ENST00000538073 PLEKHO1Q53GL0 409 aaPredicted RBP10.65□□□□□ -0.7
CIT-209ENST00000538073 ZCRB1Q8TBF4 217 aaKnown RBP10.65□□□□□ -0.7
CIT-209ENST00000538073 BRWD3Q6RI45 1802 aa10.65□□□□□ -0.71
CIT-209ENST00000538073 EXOC5O00471 708 aa10.64□□□□□ -0.71
CIT-209ENST00000538073 DDB1Q16531 1140 aa10.64□□□□□ -0.71
CIT-209ENST00000538073 MTHFSDQ2M296 383 aaKnown RBP10.64□□□□□ -0.71
CIT-209ENST00000538073 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
CIT-209ENST00000538073 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
CIT-209ENST00000538073 SPG7Q9UQ90 795 aa10.64□□□□□ -0.71
CIT-209ENST00000538073 RGS12O14924 1447 aa10.64□□□□□ -0.71
CIT-209ENST00000538073 DLG5Q8TDM6 1919 aa10.64□□□□□ -0.71
CIT-209ENST00000538073 ADAMTS7Q9UKP4 1686 aa10.63□□□□□ -0.71
CIT-209ENST00000538073 PCDH11XQ9BZA7 1347 aa10.63□□□□□ -0.71
CIT-209ENST00000538073 PCDH11YQ9BZA8 1340 aa10.63□□□□□ -0.71
CIT-209ENST00000538073 MAPK8IP3Q9UPT6 1336 aa10.63□□□□□ -0.71
CIT-209ENST00000538073 CYP27B1O15528 508 aa10.63□□□□□ -0.71
CIT-209ENST00000538073 NEFMP07197 916 aa10.63□□□□□ -0.71
CIT-209ENST00000538073 PHKG2P15735 406 aa10.62□□□□□ -0.71
CIT-209ENST00000538073 TMPOP42166 694 aaKnown RBP10.62□□□□□ -0.71
CIT-209ENST00000538073 NKX1-1Q15270 411 aaPredicted RBP10.62□□□□□ -0.71
CIT-209ENST00000538073 NFE2L2Q16236 605 aa10.62□□□□□ -0.71
CIT-209ENST00000538073 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
CIT-209ENST00000538073 VIRMAQ69YN4 1812 aaKnown RBP10.61□□□□□ -0.71
CIT-209ENST00000538073 BCL9O00512 1426 aa10.61□□□□□ -0.71
CIT-209ENST00000538073 APAF1O14727 1248 aa10.61□□□□□ -0.71
CIT-209ENST00000538073 AKAP4Q5JQC9 854 aa10.61□□□□□ -0.71
CIT-209ENST00000538073 ZNF530Q6P9A1 599 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms