RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 BTAF1O14981 1849 aa24.62■■□□□ 1.53
CCDC61-201ENST00000536603 HOXC9P31274 260 aa24.61■■□□□ 1.53
CCDC61-201ENST00000536603 SYT17Q9BSW7 474 aa24.61■■□□□ 1.53
CCDC61-201ENST00000536603 LTV1Q96GA3 475 aaPredicted RBP24.6■■□□□ 1.53
CCDC61-201ENST00000536603 TNNT2P45379 298 aaPredicted RBP24.57■■□□□ 1.52
CCDC61-201ENST00000536603 DDX54Q8TDD1 881 aaKnown RBP24.57■■□□□ 1.52
CCDC61-201ENST00000536603 ARXQ96QS3 562 aa24.57■■□□□ 1.52
CCDC61-201ENST00000536603 PER1O15534 1290 aaPredicted RBP24.56■■□□□ 1.52
CCDC61-201ENST00000536603 EMILIN1Q9Y6C2 1016 aa24.56■■□□□ 1.52
CCDC61-201ENST00000536603 NSD2O96028 1365 aa24.55■■□□□ 1.52
CCDC61-201ENST00000536603 RTL1A6NKG5 1358 aa24.54■■□□□ 1.52
CCDC61-201ENST00000536603 PAPPAQ13219 1627 aa24.54■■□□□ 1.52
CCDC61-201ENST00000536603 PPM1GO15355 546 aaPredicted RBP24.54■■□□□ 1.52
CCDC61-201ENST00000536603 AMER1Q5JTC6 1135 aaPredicted RBP24.54■■□□□ 1.52
CCDC61-201ENST00000536603 SGIP1Q9BQI5 828 aa24.54■■□□□ 1.52
CCDC61-201ENST00000536603 ZNF827Q17R98 1081 aa24.53■■□□□ 1.52
CCDC61-201ENST00000536603 HSP90AB2PQ58FF8 381 aa24.53■■□□□ 1.52
CCDC61-201ENST00000536603 MORC1Q86VD1 984 aa24.53■■□□□ 1.52
CCDC61-201ENST00000536603 SYTL4Q96C24 671 aaPredicted RBP24.53■■□□□ 1.52
CCDC61-201ENST00000536603 FAM208AQ9UK61 1670 aaKnown RBP24.53■■□□□ 1.52
CCDC61-201ENST00000536603 KLHL34Q8N239 644 aa24.52■■□□□ 1.52
CCDC61-201ENST00000536603 ZNF784Q8NCA9 323 aaPredicted RBP24.52■■□□□ 1.52
CCDC61-201ENST00000536603 LRRC4BQ9NT99 713 aa24.52■■□□□ 1.52
CCDC61-201ENST00000536603 ANKRD26Q9UPS8 1709 aa24.52■■□□□ 1.52
CCDC61-201ENST00000536603 POLKQ9UBT6 870 aa24.51■■□□□ 1.51
CCDC61-201ENST00000536603 FLT4P35916 1363 aa24.51■■□□□ 1.51
CCDC61-201ENST00000536603 KIF24Q5T7B8 1368 aa24.51■■□□□ 1.51
CCDC61-201ENST00000536603 CHD4Q14839 1912 aa24.51■■□□□ 1.51
CCDC61-201ENST00000536603 SLC27A3Q5K4L6 730 aa24.49■■□□□ 1.51
CCDC61-201ENST00000536603 CC2D1BQ5T0F9 858 aaKnown RBP24.49■■□□□ 1.51
CCDC61-201ENST00000536603 INSRP06213 1382 aa24.49■■□□□ 1.51
CCDC61-201ENST00000536603 MAP2P11137 1827 aaKnown RBP24.49■■□□□ 1.51
CCDC61-201ENST00000536603 POLD1P28340 1107 aa24.47■■□□□ 1.51
CCDC61-201ENST00000536603 GPR162Q16538 588 aa24.47■■□□□ 1.51
CCDC61-201ENST00000536603 TFCP2L1Q9NZI6 479 aa24.47■■□□□ 1.51
CCDC61-201ENST00000536603 CNGB1Q14028 1251 aaPredicted RBP24.46■■□□□ 1.51
CCDC61-201ENST00000536603 SLC16A10Q8TF71 515 aa24.46■■□□□ 1.51
CCDC61-201ENST00000536603 AKT1S1Q96B36 256 aa24.46■■□□□ 1.51
CCDC61-201ENST00000536603 SMG6Q86US8 1419 aaKnown RBP24.45■■□□□ 1.51
CCDC61-201ENST00000536603 PRIM1P49642 420 aaKnown RBP24.45■■□□□ 1.5
CCDC61-201ENST00000536603 NBPF6Q5VWK0 638 aa24.45■■□□□ 1.5
CCDC61-201ENST00000536603 NBPF4Q96M43 638 aa24.45■■□□□ 1.5
CCDC61-201ENST00000536603 DOT1LQ8TEK3 1739 aa24.44■■□□□ 1.5
CCDC61-201ENST00000536603 KCNQ4P56696 695 aa24.44■■□□□ 1.5
CCDC61-201ENST00000536603 PELP1Q8IZL8 1130 aaKnown RBP24.44■■□□□ 1.5
CCDC61-201ENST00000536603 RGPD2P0DJD1 1756 aa24.44■■□□□ 1.5
CCDC61-201ENST00000536603 QSER1Q2KHR3 1735 aa24.44■■□□□ 1.5
CCDC61-201ENST00000536603 MAP3K5Q99683 1374 aa24.43■■□□□ 1.5
CCDC61-201ENST00000536603 ZCRB1Q8TBF4 217 aaKnown RBP24.43■■□□□ 1.5
CCDC61-201ENST00000536603 USHBP1Q8N6Y0 703 aa24.42■■□□□ 1.5
CCDC61-201ENST00000536603 PNPLA7Q6ZV29 1317 aa24.41■■□□□ 1.5
CCDC61-201ENST00000536603 MSH5O43196 834 aa24.4■■□□□ 1.5
CCDC61-201ENST00000536603 NPC1L1Q9UHC9 1359 aa24.4■■□□□ 1.5
CCDC61-201ENST00000536603 TUBGCP6Q96RT7 1819 aa24.39■■□□□ 1.49
CCDC61-201ENST00000536603 CCNL1Q9UK58 526 aaPredicted RBP24.38■■□□□ 1.49
CCDC61-201ENST00000536603 LY75O60449 1722 aa24.38■■□□□ 1.49
CCDC61-201ENST00000536603 SHANK3Q9BYB0 1731 aa24.37■■□□□ 1.49
CCDC61-201ENST00000536603 MEGF6O75095 1541 aa24.36■■□□□ 1.49
CCDC61-201ENST00000536603 EIF4A2Q14240 407 aaKnown RBP24.36■■□□□ 1.49
CCDC61-201ENST00000536603 RAPGEF4Q8WZA2 1011 aa24.35■■□□□ 1.49
CCDC61-201ENST00000536603 EYA1Q99502 592 aa24.35■■□□□ 1.49
CCDC61-201ENST00000536603 SENP3-EIF4A1A0A087X0R7 540 aa24.34■■□□□ 1.49
CCDC61-201ENST00000536603 MTHFSP49914 203 aa24.34■■□□□ 1.49
CCDC61-201ENST00000536603 COL24A1Q17RW2 1714 aa24.33■■□□□ 1.49
CCDC61-201ENST00000536603 TATP17735 454 aaPredicted RBP24.32■■□□□ 1.48
CCDC61-201ENST00000536603 C1QTNF8P60827 252 aa24.32■■□□□ 1.48
CCDC61-201ENST00000536603 DDX10Q13206 875 aaKnown RBP24.31■■□□□ 1.48
CCDC61-201ENST00000536603 NLGN2Q8NFZ4 835 aa24.31■■□□□ 1.48
CCDC61-201ENST00000536603 UTRNP46939 3433 aa24.29■■□□□ 1.48
CCDC61-201ENST00000536603 MSL1Q68DK7 614 aa24.27■■□□□ 1.48
CCDC61-201ENST00000536603 COL23A1Q86Y22 540 aaPredicted RBP24.27■■□□□ 1.48
CCDC61-201ENST00000536603 GIGYF1O75420 1035 aaPredicted RBP24.26■■□□□ 1.47
CCDC61-201ENST00000536603 PCDH11XQ9BZA7 1347 aa24.26■■□□□ 1.47
CCDC61-201ENST00000536603 PCDH11YQ9BZA8 1340 aa24.26■■□□□ 1.47
CCDC61-201ENST00000536603 NCAPD2Q15021 1401 aa24.26■■□□□ 1.47
CCDC61-201ENST00000536603 C5P01031 1676 aa24.25■■□□□ 1.47
CCDC61-201ENST00000536603 HMGB2P26583 209 aaKnown RBP24.25■■□□□ 1.47
CCDC61-201ENST00000536603 IL13P35225 146 aa24.25■■□□□ 1.47
CCDC61-201ENST00000536603 IGSF1Q8N6C5 1336 aa24.25■■□□□ 1.47
CCDC61-201ENST00000536603 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
CCDC61-201ENST00000536603 MPRIPQ6WCQ1 1025 aa24.24■■□□□ 1.47
CCDC61-201ENST00000536603 GRIN3BO60391 1043 aa24.23■■□□□ 1.47
CCDC61-201ENST00000536603 PALLDQ8WX93 1383 aa24.21■■□□□ 1.47
CCDC61-201ENST00000536603 DIAPH1O60610 1272 aaKnown RBP24.21■■□□□ 1.47
CCDC61-201ENST00000536603 PPP2R1AP30153 589 aa24.21■■□□□ 1.47
CCDC61-201ENST00000536603 FLAD1Q8NFF5 587 aa24.21■■□□□ 1.47
CCDC61-201ENST00000536603 YBX3P16989 372 aaKnown RBP eCLIP24.2■■□□□ 1.46
CCDC61-201ENST00000536603 TAF1LQ8IZX4 1826 aa24.19■■□□□ 1.46
CCDC61-201ENST00000536603 SULT6B1Q6IMI4 303 aa24.19■■□□□ 1.46
CCDC61-201ENST00000536603 AEBP1Q8IUX7 1158 aa24.19■■□□□ 1.46
CCDC61-201ENST00000536603 SPG7Q9UQ90 795 aa24.19■■□□□ 1.46
CCDC61-201ENST00000536603 AK7Q96M32 723 aa24.18■■□□□ 1.46
CCDC61-201ENST00000536603 ITGB4P16144 1822 aa24.17■■□□□ 1.46
CCDC61-201ENST00000536603 CYP27B1O15528 508 aa24.17■■□□□ 1.46
CCDC61-201ENST00000536603 SMARCC1Q92922 1105 aaPredicted RBP24.17■■□□□ 1.46
CCDC61-201ENST00000536603 CFAP53Q96M91 514 aa24.16■■□□□ 1.46
CCDC61-201ENST00000536603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.16■■□□□ 1.46
CCDC61-201ENST00000536603 CD2APQ9Y5K6 639 aa24.15■■□□□ 1.46
CCDC61-201ENST00000536603 PHF14O94880 888 aa24.14■■□□□ 1.45
CCDC61-201ENST00000536603 C4BP0C0L5 1744 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms