RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 EHBP1Q8NDI1 1231 aa7.1□□□□□ -1.27
MDM2-223ENST00000536089 NXF1Q9UBU9 619 aaKnown RBP7.1□□□□□ -1.27
MDM2-223ENST00000536089 NOVA2Q9UNW9 492 aaKnown RBP7.1□□□□□ -1.27
MDM2-223ENST00000536089 ATP5J2-PTCD1G3V325 749 aa7.09□□□□□ -1.27
MDM2-223ENST00000536089 LZTS3O60299 673 aaPredicted RBP7.09□□□□□ -1.27
MDM2-223ENST00000536089 BRD1O95696 1058 aa7.09□□□□□ -1.27
MDM2-223ENST00000536089 RNF20Q5VTR2 975 aa7.09□□□□□ -1.27
MDM2-223ENST00000536089 IRF7Q92985 503 aa7.09□□□□□ -1.27
MDM2-223ENST00000536089 DOLKQ9UPQ8 538 aa7.09□□□□□ -1.27
MDM2-223ENST00000536089 DCAF1Q9Y4B6 1507 aa7.09□□□□□ -1.27
MDM2-223ENST00000536089 SKOR1P84550 965 aa7.08□□□□□ -1.28
MDM2-223ENST00000536089 ERFEQ4G0M1 354 aa7.08□□□□□ -1.28
MDM2-223ENST00000536089 OXLD1Q5BKU9 147 aa7.08□□□□□ -1.28
MDM2-223ENST00000536089 SH3RF1Q7Z6J0 888 aa7.08□□□□□ -1.28
MDM2-223ENST00000536089 GZF1Q9H116 711 aaPredicted RBP7.08□□□□□ -1.28
MDM2-223ENST00000536089 NOD1Q9Y239 953 aa7.08□□□□□ -1.28
MDM2-223ENST00000536089 RBM19Q9Y4C8 960 aaKnown RBP7.08□□□□□ -1.28
MDM2-223ENST00000536089 USP17L15C9J2P7 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L10C9JJH3 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L13C9JLJ4 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L12C9JPN9 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L11C9JVI0 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L21D6R901 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L18D6R9N7 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L22D6RA61 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L17D6RBQ6 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L19D6RCP7 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L20D6RJB6 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 CAPN5O15484 640 aaPredicted RBP7.07□□□□□ -1.28
MDM2-223ENST00000536089 GIGYF1O75420 1035 aaPredicted RBP7.07□□□□□ -1.28
MDM2-223ENST00000536089 ATP1A2P50993 1020 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 KCNA1Q09470 495 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 USP17L24Q0WX57 530 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 ELOAQ14241 798 aaKnown RBP7.07□□□□□ -1.28
MDM2-223ENST00000536089 NBPF20Q3BBV1 942 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 B4GALNT3Q6L9W6 998 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 TRIM50Q86XT4 487 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 PHTF2Q8N3S3 785 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 FAM200AQ8TCP9 573 aa7.07□□□□□ -1.28
MDM2-223ENST00000536089 FAM196BA6NMK8 535 aa7.06□□□□□ -1.28
MDM2-223ENST00000536089 RAB15P59190 212 aa7.06□□□□□ -1.28
MDM2-223ENST00000536089 SH3BP2P78314 561 aa7.06□□□□□ -1.28
MDM2-223ENST00000536089 ESF1Q9H501 851 aaKnown RBP7.06□□□□□ -1.28
MDM2-223ENST00000536089 CDV3Q9UKY7 258 aaKnown RBP7.06□□□□□ -1.28
MDM2-223ENST00000536089 TMEM88BA6NKF7 163 aa7.05□□□□□ -1.28
MDM2-223ENST00000536089 SIAH2O43255 324 aa7.05□□□□□ -1.28
MDM2-223ENST00000536089 PSME1Q06323 249 aa7.05□□□□□ -1.28
MDM2-223ENST00000536089 TSGA10IPQ3SY00 556 aa7.05□□□□□ -1.28
MDM2-223ENST00000536089 CRTC2Q53ET0 693 aaPredicted RBP7.05□□□□□ -1.28
MDM2-223ENST00000536089 TMCO4Q5TGY1 634 aa7.05□□□□□ -1.28
MDM2-223ENST00000536089 TMEM164Q5U3C3 297 aa7.05□□□□□ -1.28
MDM2-223ENST00000536089 OGFOD1Q8N543 542 aa7.05□□□□□ -1.28
MDM2-223ENST00000536089 STK32AQ8WU08 396 aa7.05□□□□□ -1.28
MDM2-223ENST00000536089 ZNF594Q96JF6 807 aaPredicted RBP7.05□□□□□ -1.28
MDM2-223ENST00000536089 DNAAF2Q9NVR5 837 aaKnown RBP7.05□□□□□ -1.28
MDM2-223ENST00000536089 CC2D2AQ9P2K1 1620 aa7.05□□□□□ -1.28
MDM2-223ENST00000536089 C4orf48Q5BLP8 95 aa7.04□□□□□ -1.28
MDM2-223ENST00000536089 MPNDQ8N594 471 aa7.04□□□□□ -1.28
MDM2-223ENST00000536089 SIRT1Q96EB6 747 aa7.04□□□□□ -1.28
MDM2-223ENST00000536089 CCDC85AQ96PX6 553 aaPredicted RBP7.04□□□□□ -1.28
MDM2-223ENST00000536089 ZMIZ1Q9ULJ6 1067 aa7.04□□□□□ -1.28
MDM2-223ENST00000536089 PCDHB11Q9Y5F2 797 aa7.04□□□□□ -1.28
MDM2-223ENST00000536089 CECR2Q9BXF3 1484 aa7.04□□□□□ -1.28
MDM2-223ENST00000536089 VARSP26640 1264 aaKnown RBP7.03□□□□□ -1.28
MDM2-223ENST00000536089 USP4Q13107 963 aa7.03□□□□□ -1.28
MDM2-223ENST00000536089 ARID5BQ14865 1188 aa7.03□□□□□ -1.28
MDM2-223ENST00000536089 ANKMY2Q8IV38 441 aa7.03□□□□□ -1.28
MDM2-223ENST00000536089 ZSCAN1Q8NBB4 408 aa7.03□□□□□ -1.28
MDM2-223ENST00000536089 CDCA7Q9BWT1 371 aaPredicted RBP7.03□□□□□ -1.28
MDM2-223ENST00000536089 ZCCHC6Q5VYS8 1495 aaKnown RBP7.03□□□□□ -1.28
MDM2-223ENST00000536089 GTF2IP78347 998 aa7.02□□□□□ -1.29
MDM2-223ENST00000536089 DPYDQ12882 1025 aa7.02□□□□□ -1.29
MDM2-223ENST00000536089 PTK7Q13308 1070 aa7.02□□□□□ -1.29
MDM2-223ENST00000536089 SCARF1Q14162 830 aa7.02□□□□□ -1.29
MDM2-223ENST00000536089 VASH1Q7L8A9 365 aaPredicted RBP7.02□□□□□ -1.29
MDM2-223ENST00000536089 KCTD15Q96SI1 283 aaPredicted RBP7.02□□□□□ -1.29
MDM2-223ENST00000536089 IVNS1ABPQ9Y6Y0 642 aa7.02□□□□□ -1.29
MDM2-223ENST00000536089 EIF4G1Q04637 1599 aaKnown RBP7.01□□□□□ -1.29
MDM2-223ENST00000536089 H3BM21 787 aa7.01□□□□□ -1.29
MDM2-223ENST00000536089 MYCP01106 439 aaPredicted RBP7.01□□□□□ -1.29
MDM2-223ENST00000536089 CCDC125Q86Z20 511 aa7.01□□□□□ -1.29
MDM2-223ENST00000536089 TRMT44Q8IYL2 757 aaKnown RBP7.01□□□□□ -1.29
MDM2-223ENST00000536089 SEPT12Q8IYM1 358 aa7.01□□□□□ -1.29
MDM2-223ENST00000536089 LARGE2Q8N3Y3 721 aa7.01□□□□□ -1.29
MDM2-223ENST00000536089 CHIC2Q9UKJ5 165 aa7.01□□□□□ -1.29
MDM2-223ENST00000536089 RANGAP1P46060 587 aaPredicted RBP7□□□□□ -1.29
MDM2-223ENST00000536089 CLDN10P78369 228 aa7□□□□□ -1.29
MDM2-223ENST00000536089 TRIM46Q7Z4K8 759 aa7□□□□□ -1.29
MDM2-223ENST00000536089 TRIM52Q96A61 297 aa7□□□□□ -1.29
MDM2-223ENST00000536089 C1QTNF2Q9BXJ5 285 aa7□□□□□ -1.29
MDM2-223ENST00000536089 BMP1P13497 986 aa6.99□□□□□ -1.29
MDM2-223ENST00000536089 GMPRP36959 345 aa6.99□□□□□ -1.29
MDM2-223ENST00000536089 CCDC102BQ68D86 513 aa6.99□□□□□ -1.29
MDM2-223ENST00000536089 TPCN2Q8NHX9 752 aa6.99□□□□□ -1.29
MDM2-223ENST00000536089 CCER1Q8TC90 406 aaPredicted RBP6.99□□□□□ -1.29
MDM2-223ENST00000536089 ESPNB1AK53 854 aa6.98□□□□□ -1.29
MDM2-223ENST00000536089 SEC13P55735 322 aa6.98□□□□□ -1.29
MDM2-223ENST00000536089 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
MDM2-223ENST00000536089 NPM2Q86SE8 214 aaKnown RBP6.98□□□□□ -1.29
MDM2-223ENST00000536089 HINFPQ9BQA5 517 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms