RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 SPON1Q9HCB6 807 aa17.4■□□□□ 0.38
DDB1-207ENST00000535967 KCNQ2O43526 872 aa17.39■□□□□ 0.38
DDB1-207ENST00000535967 YY1P25490 414 aa17.39■□□□□ 0.38
DDB1-207ENST00000535967 COG3Q96JB2 828 aa17.39■□□□□ 0.38
DDB1-207ENST00000535967 FYB1O15117 783 aa17.38■□□□□ 0.37
DDB1-207ENST00000535967 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
DDB1-207ENST00000535967 DDB1Q16531 1140 aa17.38■□□□□ 0.37
DDB1-207ENST00000535967 TOM1L2Q6ZVM7 507 aa17.38■□□□□ 0.37
DDB1-207ENST00000535967 MARCH10Q8NA82 808 aaPredicted RBP17.38■□□□□ 0.37
DDB1-207ENST00000535967 PPP1R1BQ9UD71 204 aaPredicted RBP17.38■□□□□ 0.37
DDB1-207ENST00000535967 WDR17Q8IZU2 1322 aa17.37■□□□□ 0.37
DDB1-207ENST00000535967 PLSCR1O15162 318 aa17.36■□□□□ 0.37
DDB1-207ENST00000535967 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
DDB1-207ENST00000535967 BCL11BQ9C0K0 894 aaPredicted RBP17.35■□□□□ 0.37
DDB1-207ENST00000535967 GGNBP2Q9H3C7 697 aa17.35■□□□□ 0.37
DDB1-207ENST00000535967 UTRNP46939 3433 aa17.34■□□□□ 0.37
DDB1-207ENST00000535967 SOX12O15370 315 aa17.34■□□□□ 0.37
DDB1-207ENST00000535967 ARHGEF25Q86VW2 580 aa17.34■□□□□ 0.37
DDB1-207ENST00000535967 NPC1L1Q9UHC9 1359 aa17.34■□□□□ 0.37
DDB1-207ENST00000535967 RTL1A6NKG5 1358 aa17.33■□□□□ 0.37
DDB1-207ENST00000535967 BCL9O00512 1426 aa17.32■□□□□ 0.36
DDB1-207ENST00000535967 KIF24Q5T7B8 1368 aa17.32■□□□□ 0.36
DDB1-207ENST00000535967 PER1O15534 1290 aaPredicted RBP17.31■□□□□ 0.36
DDB1-207ENST00000535967 ZBTB7AO95365 584 aa17.31■□□□□ 0.36
DDB1-207ENST00000535967 PTGER2P43116 358 aa17.3■□□□□ 0.36
DDB1-207ENST00000535967 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
DDB1-207ENST00000535967 CARD10Q9BWT7 1032 aa17.3■□□□□ 0.36
DDB1-207ENST00000535967 SMG6Q86US8 1419 aaKnown RBP17.29■□□□□ 0.36
DDB1-207ENST00000535967 POTEHQ6S545 545 aa17.29■□□□□ 0.36
DDB1-207ENST00000535967 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
DDB1-207ENST00000535967 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
DDB1-207ENST00000535967 TXNRD1Q16881 649 aa17.28■□□□□ 0.36
DDB1-207ENST00000535967 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
DDB1-207ENST00000535967 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.35
DDB1-207ENST00000535967 CDCA7Q9BWT1 371 aaPredicted RBP17.27■□□□□ 0.35
DDB1-207ENST00000535967 TNS2Q63HR2 1409 aa17.27■□□□□ 0.35
DDB1-207ENST00000535967 NHSQ6T4R5 1651 aa17.27■□□□□ 0.35
DDB1-207ENST00000535967 MAP3K19Q56UN5 1328 aa17.26■□□□□ 0.35
DDB1-207ENST00000535967 FLT4P35916 1363 aa17.26■□□□□ 0.35
DDB1-207ENST00000535967 ZNF316A6NFI3 1004 aaPredicted RBP17.25■□□□□ 0.35
DDB1-207ENST00000535967 PAPPAQ13219 1627 aa17.24■□□□□ 0.35
DDB1-207ENST00000535967 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
DDB1-207ENST00000535967 MORC1Q86VD1 984 aa17.24■□□□□ 0.35
DDB1-207ENST00000535967 BTAF1O14981 1849 aa17.23■□□□□ 0.35
DDB1-207ENST00000535967 EXOC5O00471 708 aa17.23■□□□□ 0.35
DDB1-207ENST00000535967 IP6K1Q92551 441 aa17.23■□□□□ 0.35
DDB1-207ENST00000535967 ACSBG1Q96GR2 724 aa17.23■□□□□ 0.35
DDB1-207ENST00000535967 SGIP1Q9BQI5 828 aa17.23■□□□□ 0.35
DDB1-207ENST00000535967 STK32BQ9NY57 414 aa17.23■□□□□ 0.35
DDB1-207ENST00000535967 ERBB3P21860 1342 aa17.23■□□□□ 0.35
DDB1-207ENST00000535967 HOXC9P31274 260 aa17.22■□□□□ 0.35
DDB1-207ENST00000535967 AMPHP49418 695 aa17.22■□□□□ 0.35
DDB1-207ENST00000535967 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
DDB1-207ENST00000535967 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
DDB1-207ENST00000535967 INSRP06213 1382 aa17.22■□□□□ 0.35
DDB1-207ENST00000535967 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.34
DDB1-207ENST00000535967 SYT17Q9BSW7 474 aa17.21■□□□□ 0.34
DDB1-207ENST00000535967 CHD4Q14839 1912 aa17.2■□□□□ 0.34
DDB1-207ENST00000535967 DDX10Q13206 875 aaKnown RBP17.2■□□□□ 0.34
DDB1-207ENST00000535967 EMILIN1Q9Y6C2 1016 aa17.2■□□□□ 0.34
DDB1-207ENST00000535967 FBLN1P23142 703 aa17.19■□□□□ 0.34
DDB1-207ENST00000535967 ZNF784Q8NCA9 323 aaPredicted RBP17.19■□□□□ 0.34
DDB1-207ENST00000535967 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
DDB1-207ENST00000535967 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
DDB1-207ENST00000535967 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
DDB1-207ENST00000535967 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
DDB1-207ENST00000535967 MTFR1LQ9H019 292 aa17.18■□□□□ 0.34
DDB1-207ENST00000535967 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
DDB1-207ENST00000535967 LRRC4BQ9NT99 713 aa17.16■□□□□ 0.34
DDB1-207ENST00000535967 GOLGB1Q14789 3259 aaKnown RBP17.16■□□□□ 0.34
DDB1-207ENST00000535967 IL2RBP14784 551 aa17.15■□□□□ 0.34
DDB1-207ENST00000535967 NCAPD2Q15021 1401 aa17.15■□□□□ 0.34
DDB1-207ENST00000535967 TUBGCP6Q96RT7 1819 aa17.15■□□□□ 0.34
DDB1-207ENST00000535967 SHANK3Q9BYB0 1731 aa17.14■□□□□ 0.33
DDB1-207ENST00000535967 PKD1L3Q7Z443 1732 aa17.14■□□□□ 0.33
DDB1-207ENST00000535967 PPM1GO15355 546 aaPredicted RBP17.13■□□□□ 0.33
DDB1-207ENST00000535967 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
DDB1-207ENST00000535967 COL3A1P02461 1466 aaPredicted RBP17.13■□□□□ 0.33
DDB1-207ENST00000535967 ARXQ96QS3 562 aa17.13■□□□□ 0.33
DDB1-207ENST00000535967 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
DDB1-207ENST00000535967 SPDYE1Q8NFV5 336 aaPredicted RBP17.11■□□□□ 0.33
DDB1-207ENST00000535967 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
DDB1-207ENST00000535967 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
DDB1-207ENST00000535967 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
DDB1-207ENST00000535967 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
DDB1-207ENST00000535967 KCNQ4P56696 695 aa17.1■□□□□ 0.33
DDB1-207ENST00000535967 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
DDB1-207ENST00000535967 RALBP1Q15311 655 aa17.1■□□□□ 0.33
DDB1-207ENST00000535967 DOT1LQ8TEK3 1739 aa17.1■□□□□ 0.33
DDB1-207ENST00000535967 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
DDB1-207ENST00000535967 MTHFSP49914 203 aa17.09■□□□□ 0.33
DDB1-207ENST00000535967 CLEC11AQ9Y240 323 aa17.09■□□□□ 0.33
DDB1-207ENST00000535967 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
DDB1-207ENST00000535967 DDX54Q8TDD1 881 aaKnown RBP17.08■□□□□ 0.32
DDB1-207ENST00000535967 PNPLA7Q6ZV29 1317 aa17.07■□□□□ 0.32
DDB1-207ENST00000535967 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
DDB1-207ENST00000535967 CHRDL2Q6WN34 429 aa17.07■□□□□ 0.32
DDB1-207ENST00000535967 MEGF6O75095 1541 aa17.06■□□□□ 0.32
DDB1-207ENST00000535967 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
DDB1-207ENST00000535967 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms