RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 CRB1P82279 1406 aa12.78□□□□□ -0.36
UBB-204ENST00000535788 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.36
UBB-204ENST00000535788 LTN1O94822 1766 aa12.77□□□□□ -0.36
UBB-204ENST00000535788 CASZ1Q86V15 1759 aa12.77□□□□□ -0.36
UBB-204ENST00000535788 ABCC6O95255 1503 aa12.77□□□□□ -0.37
UBB-204ENST00000535788 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
UBB-204ENST00000535788 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
UBB-204ENST00000535788 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
UBB-204ENST00000535788 HSPA5P11021 654 aaKnown RBP12.75□□□□□ -0.37
UBB-204ENST00000535788 PPP4R3CPQ6ZMV5 832 aa12.75□□□□□ -0.37
UBB-204ENST00000535788 TOM1L2Q6ZVM7 507 aa12.75□□□□□ -0.37
UBB-204ENST00000535788 WDR17Q8IZU2 1322 aa12.75□□□□□ -0.37
UBB-204ENST00000535788 C11orf95C9JLR9 678 aaPredicted RBP12.74□□□□□ -0.37
UBB-204ENST00000535788 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
UBB-204ENST00000535788 SLC15A2Q16348 729 aa12.74□□□□□ -0.37
UBB-204ENST00000535788 COG3Q96JB2 828 aa12.74□□□□□ -0.37
UBB-204ENST00000535788 THRAP3Q9Y2W1 955 aaKnown RBP12.74□□□□□ -0.37
UBB-204ENST00000535788 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
UBB-204ENST00000535788 WNK3Q9BYP7 1800 aa12.74□□□□□ -0.37
UBB-204ENST00000535788 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
UBB-204ENST00000535788 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
UBB-204ENST00000535788 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
UBB-204ENST00000535788 OVOS2A0A0G2JMS6 1433 aa12.72□□□□□ -0.37
UBB-204ENST00000535788 NSD3Q9BZ95 1437 aa12.72□□□□□ -0.37
UBB-204ENST00000535788 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
UBB-204ENST00000535788 LRRC37A3O60309 1634 aa12.72□□□□□ -0.37
UBB-204ENST00000535788 DDB1Q16531 1140 aa12.71□□□□□ -0.37
UBB-204ENST00000535788 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.37
UBB-204ENST00000535788 ERBB3P21860 1342 aa12.7□□□□□ -0.38
UBB-204ENST00000535788 FYB1O15117 783 aa12.7□□□□□ -0.38
UBB-204ENST00000535788 DHX37Q8IY37 1157 aaKnown RBP12.7□□□□□ -0.38
UBB-204ENST00000535788 CARD10Q9BWT7 1032 aa12.7□□□□□ -0.38
UBB-204ENST00000535788 CARD14Q9BXL6 1004 aa12.7□□□□□ -0.38
UBB-204ENST00000535788 MAP3K19Q56UN5 1328 aa12.69□□□□□ -0.38
UBB-204ENST00000535788 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
UBB-204ENST00000535788 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
UBB-204ENST00000535788 SBF2Q86WG5 1849 aa12.68□□□□□ -0.38
UBB-204ENST00000535788 FBLN1P23142 703 aa12.68□□□□□ -0.38
UBB-204ENST00000535788 ANKRD24Q8TF21 1146 aa12.68□□□□□ -0.38
UBB-204ENST00000535788 IP6K1Q92551 441 aa12.68□□□□□ -0.38
UBB-204ENST00000535788 HSPA6P17066 643 aa12.67□□□□□ -0.38
UBB-204ENST00000535788 MARCH10Q8NA82 808 aaPredicted RBP12.67□□□□□ -0.38
UBB-204ENST00000535788 CDCA7Q9BWT1 371 aaPredicted RBP12.67□□□□□ -0.38
UBB-204ENST00000535788 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
UBB-204ENST00000535788 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
UBB-204ENST00000535788 RGPD3A6NKT7 1758 aaPredicted RBP12.66□□□□□ -0.38
UBB-204ENST00000535788 RGPD4Q7Z3J3 1758 aa12.66□□□□□ -0.38
UBB-204ENST00000535788 PEAK1Q9H792 1746 aa12.66□□□□□ -0.38
UBB-204ENST00000535788 HOXC9P31274 260 aa12.66□□□□□ -0.38
UBB-204ENST00000535788 AMPHP49418 695 aa12.66□□□□□ -0.38
UBB-204ENST00000535788 RRS1Q15050 365 aaKnown RBP12.66□□□□□ -0.38
UBB-204ENST00000535788 ZNF526Q8TF50 670 aaPredicted RBP12.66□□□□□ -0.38
UBB-204ENST00000535788 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
UBB-204ENST00000535788 RTL1A6NKG5 1358 aa12.66□□□□□ -0.38
UBB-204ENST00000535788 CAPN15O75808 1086 aa12.65□□□□□ -0.38
UBB-204ENST00000535788 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
UBB-204ENST00000535788 CGNL1Q0VF96 1302 aa12.64□□□□□ -0.39
UBB-204ENST00000535788 TNS2Q63HR2 1409 aa12.64□□□□□ -0.39
UBB-204ENST00000535788 NLGN2Q8NFZ4 835 aa12.64□□□□□ -0.39
UBB-204ENST00000535788 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
UBB-204ENST00000535788 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
UBB-204ENST00000535788 ANKRD26Q9UPS8 1709 aa12.63□□□□□ -0.39
UBB-204ENST00000535788 PANK3Q9H999 370 aa12.63□□□□□ -0.39
UBB-204ENST00000535788 BCCIPQ9P287 314 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBB-204ENST00000535788 RGPD2P0DJD1 1756 aa12.63□□□□□ -0.39
UBB-204ENST00000535788 IL2RBP14784 551 aa12.62□□□□□ -0.39
UBB-204ENST00000535788 YBX3P16989 372 aaKnown RBP eCLIP12.62□□□□□ -0.393e-15■■□□□ 13.5
UBB-204ENST00000535788 POLD1P28340 1107 aa12.62□□□□□ -0.39
UBB-204ENST00000535788 ACSBG1Q96GR2 724 aa12.62□□□□□ -0.39
UBB-204ENST00000535788 KIF7Q2M1P5 1343 aa12.62□□□□□ -0.39
UBB-204ENST00000535788 FLT4P35916 1363 aa12.61□□□□□ -0.39
UBB-204ENST00000535788 KIF24Q5T7B8 1368 aa12.61□□□□□ -0.39
UBB-204ENST00000535788 EXOC5O00471 708 aa12.61□□□□□ -0.39
UBB-204ENST00000535788 GRIN3BO60391 1043 aa12.61□□□□□ -0.39
UBB-204ENST00000535788 SMG6Q86US8 1419 aaKnown RBP12.61□□□□□ -0.39
UBB-204ENST00000535788 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
UBB-204ENST00000535788 INSRP06213 1382 aa12.6□□□□□ -0.39
UBB-204ENST00000535788 ZNF827Q17R98 1081 aa12.6□□□□□ -0.39
UBB-204ENST00000535788 EMILIN1Q9Y6C2 1016 aa12.6□□□□□ -0.39
UBB-204ENST00000535788 HSP90AB2PQ58FF8 381 aa12.59□□□□□ -0.39
UBB-204ENST00000535788 ARID3AQ99856 593 aa12.59□□□□□ -0.39
UBB-204ENST00000535788 BCL9O00512 1426 aa12.59□□□□□ -0.39
UBB-204ENST00000535788 NSD2O96028 1365 aa12.58□□□□□ -0.4
UBB-204ENST00000535788 MEGF6O75095 1541 aa12.58□□□□□ -0.4
UBB-204ENST00000535788 PPM1GO15355 546 aaPredicted RBP12.58□□□□□ -0.4
UBB-204ENST00000535788 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
UBB-204ENST00000535788 MAP2P11137 1827 aaKnown RBP12.58□□□□□ -0.4
UBB-204ENST00000535788 TNNT2P45379 298 aaPredicted RBP12.57□□□□□ -0.4
UBB-204ENST00000535788 NBPF6Q5VWK0 638 aa12.57□□□□□ -0.4
UBB-204ENST00000535788 USHBP1Q8N6Y0 703 aa12.57□□□□□ -0.4
UBB-204ENST00000535788 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
UBB-204ENST00000535788 NBPF4Q96M43 638 aa12.57□□□□□ -0.4
UBB-204ENST00000535788 KAT6BQ8WYB5 2073 aa12.57□□□□□ -0.4
UBB-204ENST00000535788 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
UBB-204ENST00000535788 LRRC4BQ9NT99 713 aa12.56□□□□□ -0.4
UBB-204ENST00000535788 NHSQ6T4R5 1651 aa12.56□□□□□ -0.4
UBB-204ENST00000535788 COL13A1Q5TAT6 717 aaPredicted RBP12.55□□□□□ -0.4
UBB-204ENST00000535788 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
UBB-204ENST00000535788 POLKQ9UBT6 870 aa12.55□□□□□ -0.4
UBB-204ENST00000535788 KNSTRNQ9Y448 316 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms