RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 PLEKHF1Q96S99 279 aa20.68■□□□□ 0.9
CNN1-202ENST00000535659 MEGF6O75095 1541 aa20.66■□□□□ 0.9
CNN1-202ENST00000535659 EXOC5O00471 708 aa20.66■□□□□ 0.9
CNN1-202ENST00000535659 NEFMP07197 916 aa20.66■□□□□ 0.9
CNN1-202ENST00000535659 PLEKHO1Q53GL0 409 aaPredicted RBP20.66■□□□□ 0.9
CNN1-202ENST00000535659 UPF1Q92900 1129 aaKnown RBP eCLIP20.66■□□□□ 0.9
CNN1-202ENST00000535659 RUNDC1Q96C34 613 aa20.66■□□□□ 0.9
CNN1-202ENST00000535659 PHACTR3Q96KR7 559 aa20.66■□□□□ 0.9
CNN1-202ENST00000535659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.66■□□□□ 0.9
CNN1-202ENST00000535659 DISP2A7MBM2 1401 aa20.65■□□□□ 0.9
CNN1-202ENST00000535659 AMOTQ4VCS5 1084 aa20.65■□□□□ 0.9
CNN1-202ENST00000535659 CCDC146Q8IYE0 955 aa20.65■□□□□ 0.9
CNN1-202ENST00000535659 ZCRB1Q8TBF4 217 aaKnown RBP20.65■□□□□ 0.9
CNN1-202ENST00000535659 SPG7Q9UQ90 795 aa20.64■□□□□ 0.9
CNN1-202ENST00000535659 WNK3Q9BYP7 1800 aa20.64■□□□□ 0.9
CNN1-202ENST00000535659 A0A0G2JS52 829 aa20.63■□□□□ 0.89
CNN1-202ENST00000535659 MYT1Q01538 1121 aa20.63■□□□□ 0.89
CNN1-202ENST00000535659 PLEKHG2Q9H7P9 1386 aa20.63■□□□□ 0.89
CNN1-202ENST00000535659 DDB1Q16531 1140 aa20.63■□□□□ 0.89
CNN1-202ENST00000535659 SEPT12Q8IYM1 358 aa20.63■□□□□ 0.89
CNN1-202ENST00000535659 OVOS2A0A0G2JMS6 1433 aa20.62■□□□□ 0.89
CNN1-202ENST00000535659 PARP4Q9UKK3 1724 aaKnown RBP20.62■□□□□ 0.89
CNN1-202ENST00000535659 MAPK8IP3Q9UPT6 1336 aa20.62■□□□□ 0.89
CNN1-202ENST00000535659 MTHFSDQ2M296 383 aaKnown RBP20.62■□□□□ 0.89
CNN1-202ENST00000535659 THSD7AQ9UPZ6 1657 aa20.59■□□□□ 0.89
CNN1-202ENST00000535659 GAS2L2Q8NHY3 880 aa20.59■□□□□ 0.89
CNN1-202ENST00000535659 DDX54Q8TDD1 881 aaKnown RBP20.59■□□□□ 0.89
CNN1-202ENST00000535659 PDE3BQ13370 1112 aa20.58■□□□□ 0.89
CNN1-202ENST00000535659 APAF1O14727 1248 aa20.58■□□□□ 0.88
CNN1-202ENST00000535659 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.88
CNN1-202ENST00000535659 CYP27B1O15528 508 aa20.57■□□□□ 0.88
CNN1-202ENST00000535659 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
CNN1-202ENST00000535659 IFNL2Q8IZJ0 200 aa20.57■□□□□ 0.88
CNN1-202ENST00000535659 LRRC37A3O60309 1634 aa20.57■□□□□ 0.88
CNN1-202ENST00000535659 PCDH11XQ9BZA7 1347 aa20.56■□□□□ 0.88
CNN1-202ENST00000535659 PCDH11YQ9BZA8 1340 aa20.56■□□□□ 0.88
CNN1-202ENST00000535659 PKD1L3Q7Z443 1732 aa20.56■□□□□ 0.88
CNN1-202ENST00000535659 TMPOP42166 694 aaKnown RBP20.56■□□□□ 0.88
CNN1-202ENST00000535659 C1orf141Q5JVX7 400 aa20.56■□□□□ 0.88
CNN1-202ENST00000535659 TNS2Q63HR2 1409 aa20.56■□□□□ 0.88
CNN1-202ENST00000535659 PHKG2P15735 406 aa20.55■□□□□ 0.88
CNN1-202ENST00000535659 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
CNN1-202ENST00000535659 RIPK4P57078 832 aa20.54■□□□□ 0.88
CNN1-202ENST00000535659 NEUROD2Q15784 382 aa20.54■□□□□ 0.88
CNN1-202ENST00000535659 MARCH10Q8NA82 808 aaPredicted RBP20.54■□□□□ 0.88
CNN1-202ENST00000535659 RGS12O14924 1447 aa20.53■□□□□ 0.88
CNN1-202ENST00000535659 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
CNN1-202ENST00000535659 SHANK3Q9BYB0 1731 aa20.53■□□□□ 0.88
CNN1-202ENST00000535659 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
CNN1-202ENST00000535659 NKX1-1Q15270 411 aaPredicted RBP20.53■□□□□ 0.88
CNN1-202ENST00000535659 KRT27Q7Z3Y8 459 aa20.53■□□□□ 0.88
CNN1-202ENST00000535659 HSP90AB1P08238 724 aaKnown RBP20.52■□□□□ 0.87
CNN1-202ENST00000535659 SENP3-EIF4A1A0A087X0R7 540 aa20.51■□□□□ 0.87
CNN1-202ENST00000535659 HTATSF1O43719 755 aaKnown RBP20.51■□□□□ 0.87
CNN1-202ENST00000535659 NCBP3Q53F19 620 aaKnown RBP20.5■□□□□ 0.87
CNN1-202ENST00000535659 MPRIPQ6WCQ1 1025 aa20.49■□□□□ 0.87
CNN1-202ENST00000535659 NGEFQ8N5V2 710 aa20.49■□□□□ 0.87
CNN1-202ENST00000535659 RTF1Q92541 710 aaKnown RBP20.49■□□□□ 0.87
CNN1-202ENST00000535659 DCAF5Q96JK2 942 aa20.49■□□□□ 0.87
CNN1-202ENST00000535659 MAP3K5Q99683 1374 aa20.49■□□□□ 0.87
CNN1-202ENST00000535659 LGR6Q9HBX8 967 aa20.48■□□□□ 0.87
CNN1-202ENST00000535659 LMOD3Q0VAK6 560 aa20.48■□□□□ 0.87
CNN1-202ENST00000535659 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
CNN1-202ENST00000535659 IL17REQ8NFR9 667 aa20.48■□□□□ 0.87
CNN1-202ENST00000535659 TRIM35Q9UPQ4 493 aa20.48■□□□□ 0.87
CNN1-202ENST00000535659 SALL2Q9Y467 1007 aaPredicted RBP20.48■□□□□ 0.87
CNN1-202ENST00000535659 BRWD3Q6RI45 1802 aa20.47■□□□□ 0.87
CNN1-202ENST00000535659 RNMTO43148 476 aaKnown RBP20.46■□□□□ 0.87
CNN1-202ENST00000535659 CCDC27Q2M243 656 aa20.46■□□□□ 0.87
CNN1-202ENST00000535659 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
CNN1-202ENST00000535659 FAM196AQ6ZSG2 479 aa20.45■□□□□ 0.86
CNN1-202ENST00000535659 MCM10Q7L590 875 aa20.45■□□□□ 0.86
CNN1-202ENST00000535659 HNRNPUQ00839 825 aaKnown RBP eCLIP20.44■□□□□ 0.86
CNN1-202ENST00000535659 ERVV-2B6SEH9 535 aa20.43■□□□□ 0.86
CNN1-202ENST00000535659 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
CNN1-202ENST00000535659 DLG5Q8TDM6 1919 aa20.43■□□□□ 0.86
CNN1-202ENST00000535659 KDM6AO15550 1401 aaPredicted RBP20.42■□□□□ 0.86
CNN1-202ENST00000535659 BCL9O00512 1426 aa20.41■□□□□ 0.86
CNN1-202ENST00000535659 CEMIPQ8WUJ3 1361 aa20.41■□□□□ 0.86
CNN1-202ENST00000535659 PRIM1P49642 420 aaKnown RBP20.41■□□□□ 0.86
CNN1-202ENST00000535659 CABP4P57796 275 aa20.41■□□□□ 0.86
CNN1-202ENST00000535659 ACSBG1Q96GR2 724 aa20.41■□□□□ 0.86
CNN1-202ENST00000535659 THUMPD2Q9BTF0 503 aaKnown RBP20.41■□□□□ 0.86
CNN1-202ENST00000535659 TEFQ10587 303 aa20.4■□□□□ 0.86
CNN1-202ENST00000535659 NFATC2IPQ8NCF5 419 aa20.4■□□□□ 0.86
CNN1-202ENST00000535659 SLC52A2Q9HAB3 445 aa20.4■□□□□ 0.86
CNN1-202ENST00000535659 ADAMTS7Q9UKP4 1686 aa20.38■□□□□ 0.85
CNN1-202ENST00000535659 CALD1Q05682 793 aaKnown RBP20.38■□□□□ 0.85
CNN1-202ENST00000535659 WDR63Q8IWG1 891 aa20.38■□□□□ 0.85
CNN1-202ENST00000535659 SYTL4Q96C24 671 aaPredicted RBP20.38■□□□□ 0.85
CNN1-202ENST00000535659 EP400Q96L91 3159 aa20.38■□□□□ 0.85
CNN1-202ENST00000535659 TOGARAM1Q9Y4F4 1720 aa20.38■□□□□ 0.85
CNN1-202ENST00000535659 KCNQ2O43526 872 aa20.37■□□□□ 0.85
CNN1-202ENST00000535659 TAF7Q15545 349 aaPredicted RBP20.37■□□□□ 0.85
CNN1-202ENST00000535659 TMOD3Q9NYL9 352 aa20.37■□□□□ 0.85
CNN1-202ENST00000535659 SCN11AQ9UI33 1791 aa20.36■□□□□ 0.85
CNN1-202ENST00000535659 ZNF521Q96K83 1311 aa20.36■□□□□ 0.85
CNN1-202ENST00000535659 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
CNN1-202ENST00000535659 PIGBQ92521 554 aa20.36■□□□□ 0.85
CNN1-202ENST00000535659 YTHDC1Q96MU7 727 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms