RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TATP17735 454 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-204ENST00000535005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCARB1-204ENST00000535005 TRPC5Q9UL62 973 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-204ENST00000535005 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
SCARB1-204ENST00000535005 IL2RBP14784 551 aa16.19■□□□□ 0.18
SCARB1-204ENST00000535005 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
SCARB1-204ENST00000535005 BARGINQ6ZT62 677 aa16.19■□□□□ 0.18
SCARB1-204ENST00000535005 CDCA7Q9BWT1 371 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-204ENST00000535005 APAF1O14727 1248 aa16.18■□□□□ 0.18
SCARB1-204ENST00000535005 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
SCARB1-204ENST00000535005 ZNF772Q68DY9 489 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-204ENST00000535005 NGEFQ8N5V2 710 aa16.18■□□□□ 0.18
SCARB1-204ENST00000535005 MEGF6O75095 1541 aa16.18■□□□□ 0.18
SCARB1-204ENST00000535005 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-204ENST00000535005 USP35Q9P2H5 1018 aa16.17■□□□□ 0.18
SCARB1-204ENST00000535005 OVOS2A0A0G2JMS6 1433 aa16.17■□□□□ 0.18
SCARB1-204ENST00000535005 FANCIQ9NVI1 1328 aa16.17■□□□□ 0.18
SCARB1-204ENST00000535005 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-204ENST00000535005 CCDC9Q9Y3X0 531 aaKnown RBP16.17■□□□□ 0.18
SCARB1-204ENST00000535005 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
SCARB1-204ENST00000535005 NFE2L2Q16236 605 aa16.16■□□□□ 0.18
SCARB1-204ENST00000535005 GAS2L2Q8NHY3 880 aa16.16■□□□□ 0.18
SCARB1-204ENST00000535005 QTRT2Q9H974 415 aaKnown RBP16.16■□□□□ 0.18
SCARB1-204ENST00000535005 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
SCARB1-204ENST00000535005 SPG7Q9UQ90 795 aa16.15■□□□□ 0.18
SCARB1-204ENST00000535005 PARP4Q9UKK3 1724 aaKnown RBP16.14■□□□□ 0.17
SCARB1-204ENST00000535005 ONECUT3O60422 494 aaPredicted RBP16.14■□□□□ 0.17
SCARB1-204ENST00000535005 HNRNPUQ00839 825 aaKnown RBP eCLIP16.13■□□□□ 0.172e-7■■□□□ 11.5
SCARB1-204ENST00000535005 CCDC27Q2M243 656 aa16.13■□□□□ 0.17
SCARB1-204ENST00000535005 ZCRB1Q8TBF4 217 aaKnown RBP16.13■□□□□ 0.17
SCARB1-204ENST00000535005 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
SCARB1-204ENST00000535005 GLI3P10071 1580 aa16.13■□□□□ 0.17
SCARB1-204ENST00000535005 PKD1L3Q7Z443 1732 aa16.13■□□□□ 0.17
SCARB1-204ENST00000535005 WNK3Q9BYP7 1800 aa16.13■□□□□ 0.17
SCARB1-204ENST00000535005 HTATSF1O43719 755 aaKnown RBP16.12■□□□□ 0.17
SCARB1-204ENST00000535005 RIPK4P57078 832 aa16.12■□□□□ 0.17
SCARB1-204ENST00000535005 RGS17Q9UGC6 210 aaPredicted RBP16.12■□□□□ 0.17
SCARB1-204ENST00000535005 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-204ENST00000535005 RRP7AQ9Y3A4 280 aaKnown RBP16.11■□□□□ 0.17
SCARB1-204ENST00000535005 EXOC5O00471 708 aa16.1■□□□□ 0.17
SCARB1-204ENST00000535005 FAM98CQ17RN3 349 aaKnown RBP16.1■□□□□ 0.17
SCARB1-204ENST00000535005 AKAP4Q5JQC9 854 aa16.1■□□□□ 0.17
SCARB1-204ENST00000535005 RBM6P78332 1123 aaKnown RBP16.1■□□□□ 0.17
SCARB1-204ENST00000535005 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
SCARB1-204ENST00000535005 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
SCARB1-204ENST00000535005 PCDH11XQ9BZA7 1347 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 PCDH11YQ9BZA8 1340 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 TNS2Q63HR2 1409 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 CYP27B1O15528 508 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 PHKG2P15735 406 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 NEUROD2Q15784 382 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 ZBED9Q6R2W3 1325 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 ZNF521Q96K83 1311 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 THSD7AQ9UPZ6 1657 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 MAP3K5Q99683 1374 aa16.09■□□□□ 0.17
SCARB1-204ENST00000535005 DDB1Q16531 1140 aa16.08■□□□□ 0.17
SCARB1-204ENST00000535005 C1orf141Q5JVX7 400 aa16.08■□□□□ 0.17
SCARB1-204ENST00000535005 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-204ENST00000535005 WWC1Q8IX03 1113 aa16.08■□□□□ 0.16
SCARB1-204ENST00000535005 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
SCARB1-204ENST00000535005 HSP90AB1P08238 724 aaKnown RBP16.06■□□□□ 0.16
SCARB1-204ENST00000535005 SALL2Q9Y467 1007 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-204ENST00000535005 SHANK3Q9BYB0 1731 aa16.06■□□□□ 0.16
SCARB1-204ENST00000535005 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
SCARB1-204ENST00000535005 LRRC37A3O60309 1634 aa16.06■□□□□ 0.16
SCARB1-204ENST00000535005 POTEAQ6S8J7 498 aa16.05■□□□□ 0.16
SCARB1-204ENST00000535005 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
SCARB1-204ENST00000535005 RTF1Q92541 710 aaKnown RBP16.05■□□□□ 0.16
SCARB1-204ENST00000535005 RXRBP28702 533 aa16.05■□□□□ 0.16
SCARB1-204ENST00000535005 IL17REQ8NFR9 667 aa16.05■□□□□ 0.16
SCARB1-204ENST00000535005 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
SCARB1-204ENST00000535005 DDX54Q8TDD1 881 aaKnown RBP16.04■□□□□ 0.16
SCARB1-204ENST00000535005 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
SCARB1-204ENST00000535005 CEMIPQ8WUJ3 1361 aa16.04■□□□□ 0.16
SCARB1-204ENST00000535005 ADAMTS7Q9UKP4 1686 aa16.04■□□□□ 0.16
SCARB1-204ENST00000535005 RNMTO43148 476 aaKnown RBP16.03■□□□□ 0.16
SCARB1-204ENST00000535005 CALD1Q05682 793 aaKnown RBP16.03■□□□□ 0.16
SCARB1-204ENST00000535005 IL16Q14005 1332 aa16.03■□□□□ 0.16
SCARB1-204ENST00000535005 PDE3BQ13370 1112 aa16.03■□□□□ 0.16
SCARB1-204ENST00000535005 MARCH10Q8NA82 808 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-204ENST00000535005 KDM6AO15550 1401 aaPredicted RBP16.02■□□□□ 0.16
SCARB1-204ENST00000535005 DCTN1Q14203 1278 aa16.02■□□□□ 0.16
SCARB1-204ENST00000535005 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
SCARB1-204ENST00000535005 MCM10Q7L590 875 aa16.02■□□□□ 0.16
SCARB1-204ENST00000535005 LGR6Q9HBX8 967 aa16.02■□□□□ 0.16
SCARB1-204ENST00000535005 A0A0G2JS52 829 aa16.01■□□□□ 0.15
SCARB1-204ENST00000535005 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
SCARB1-204ENST00000535005 THUMPD2Q9BTF0 503 aaKnown RBP16.01■□□□□ 0.15
SCARB1-204ENST00000535005 ERVV-2B6SEH9 535 aa16■□□□□ 0.15
SCARB1-204ENST00000535005 BCL9O00512 1426 aa15.99■□□□□ 0.15
SCARB1-204ENST00000535005 ZNF853P0CG23 659 aa15.98■□□□□ 0.15
SCARB1-204ENST00000535005 BABAM1Q9NWV8 329 aa15.98■□□□□ 0.15
SCARB1-204ENST00000535005 SCN11AQ9UI33 1791 aa15.98■□□□□ 0.15
SCARB1-204ENST00000535005 MRC1P22897 1456 aa15.98■□□□□ 0.15
SCARB1-204ENST00000535005 SLFN5Q08AF3 891 aa15.98■□□□□ 0.15
SCARB1-204ENST00000535005 TRMT2AQ8IZ69 625 aaKnown RBP15.98■□□□□ 0.15
SCARB1-204ENST00000535005 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
SCARB1-204ENST00000535005 E9PSI1 815 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms