RNA–Protein interactions for RNA: ENST00000534267.5

CDKL1-209, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 2

Gene CDKL1, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-209ENST00000534267 FCHSD2O94868 740 aa12.32□□□□□ -0.44
CDKL1-209ENST00000534267 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
CDKL1-209ENST00000534267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDKL1-209ENST00000534267 LTN1O94822 1766 aa12.32□□□□□ -0.44
CDKL1-209ENST00000534267 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.31□□□□□ -0.44
CDKL1-209ENST00000534267 CSB-PGBD3P0DP91 1061 aa12.31□□□□□ -0.44
CDKL1-209ENST00000534267 PLEKHF1Q96S99 279 aa12.31□□□□□ -0.44
CDKL1-209ENST00000534267 CDCA7Q9BWT1 371 aaPredicted RBP12.31□□□□□ -0.44
CDKL1-209ENST00000534267 RSPH6AQ9H0K4 717 aa12.31□□□□□ -0.44
CDKL1-209ENST00000534267 PLCH1Q4KWH8 1693 aa12.31□□□□□ -0.44
CDKL1-209ENST00000534267 RXRBP28702 533 aa12.3□□□□□ -0.44
CDKL1-209ENST00000534267 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
CDKL1-209ENST00000534267 ADAMTS8Q9UP79 889 aa12.3□□□□□ -0.44
CDKL1-209ENST00000534267 NUDCQ9Y266 331 aa12.3□□□□□ -0.44
CDKL1-209ENST00000534267 GLI3P10071 1580 aa12.3□□□□□ -0.44
CDKL1-209ENST00000534267 RGPD1P0DJD0 1748 aa12.29□□□□□ -0.44
CDKL1-209ENST00000534267 IL2RBP14784 551 aa12.29□□□□□ -0.44
CDKL1-209ENST00000534267 USHBP1Q8N6Y0 703 aa12.29□□□□□ -0.44
CDKL1-209ENST00000534267 FAM98CQ17RN3 349 aaKnown RBP12.28□□□□□ -0.44
CDKL1-209ENST00000534267 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
CDKL1-209ENST00000534267 RGPD5Q99666 1765 aa12.28□□□□□ -0.44
CDKL1-209ENST00000534267 FAM208AQ9UK61 1670 aaKnown RBP12.27□□□□□ -0.45
CDKL1-209ENST00000534267 U2AF1L5P0DN76 240 aaPredicted RBP12.27□□□□□ -0.45
CDKL1-209ENST00000534267 U2AF1Q01081 240 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDKL1-209ENST00000534267 SEPT12Q8IYM1 358 aa12.27□□□□□ -0.45
CDKL1-209ENST00000534267 MRS2Q9HD23 443 aa12.27□□□□□ -0.45
CDKL1-209ENST00000534267 USP35Q9P2H5 1018 aa12.27□□□□□ -0.45
CDKL1-209ENST00000534267 OVOS2A0A0G2JMS6 1433 aa12.27□□□□□ -0.45
CDKL1-209ENST00000534267 MEGF6O75095 1541 aa12.27□□□□□ -0.45
CDKL1-209ENST00000534267 U2SURPO15042 1029 aaKnown RBP12.26□□□□□ -0.45
CDKL1-209ENST00000534267 HMOX1P09601 288 aa12.26□□□□□ -0.45
CDKL1-209ENST00000534267 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
CDKL1-209ENST00000534267 CYP27B1O15528 508 aa12.25□□□□□ -0.45
CDKL1-209ENST00000534267 ZCRB1Q8TBF4 217 aaKnown RBP12.25□□□□□ -0.45
CDKL1-209ENST00000534267 RAPGEF4Q8WZA2 1011 aa12.25□□□□□ -0.45
CDKL1-209ENST00000534267 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
CDKL1-209ENST00000534267 BCL9O00512 1426 aa12.25□□□□□ -0.45
CDKL1-209ENST00000534267 EXOC5O00471 708 aa12.24□□□□□ -0.45
CDKL1-209ENST00000534267 PRKAR2BP31323 418 aa12.24□□□□□ -0.45
CDKL1-209ENST00000534267 AMOTQ4VCS5 1084 aa12.24□□□□□ -0.45
CDKL1-209ENST00000534267 MARCH10Q8NA82 808 aaPredicted RBP12.24□□□□□ -0.45
CDKL1-209ENST00000534267 THSD7AQ9UPZ6 1657 aa12.23□□□□□ -0.45
CDKL1-209ENST00000534267 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
CDKL1-209ENST00000534267 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
CDKL1-209ENST00000534267 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
CDKL1-209ENST00000534267 MKRN4PQ13434 485 aaPredicted RBP12.22□□□□□ -0.45
CDKL1-209ENST00000534267 DDB1Q16531 1140 aa12.22□□□□□ -0.45
CDKL1-209ENST00000534267 PLEKHO1Q53GL0 409 aaPredicted RBP12.22□□□□□ -0.45
CDKL1-209ENST00000534267 CHRDL2Q6WN34 429 aa12.22□□□□□ -0.45
CDKL1-209ENST00000534267 RGS12O14924 1447 aa12.21□□□□□ -0.45
CDKL1-209ENST00000534267 RUNDC1Q96C34 613 aa12.21□□□□□ -0.45
CDKL1-209ENST00000534267 PNNQ9H307 717 aaKnown RBP12.21□□□□□ -0.45
CDKL1-209ENST00000534267 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
CDKL1-209ENST00000534267 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
CDKL1-209ENST00000534267 PHKG2P15735 406 aa12.2□□□□□ -0.46
CDKL1-209ENST00000534267 WDR43Q15061 677 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDKL1-209ENST00000534267 TNS2Q63HR2 1409 aa12.2□□□□□ -0.46
CDKL1-209ENST00000534267 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
CDKL1-209ENST00000534267 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
CDKL1-209ENST00000534267 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
CDKL1-209ENST00000534267 TMPOP42166 694 aaKnown RBP12.18□□□□□ -0.46
CDKL1-209ENST00000534267 NFE2L2Q16236 605 aa12.18□□□□□ -0.46
CDKL1-209ENST00000534267 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
CDKL1-209ENST00000534267 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
CDKL1-209ENST00000534267 IFNL2Q8IZJ0 200 aa12.18□□□□□ -0.46
CDKL1-209ENST00000534267 GAS2L2Q8NHY3 880 aa12.18□□□□□ -0.46
CDKL1-209ENST00000534267 PCDH11XQ9BZA7 1347 aa12.17□□□□□ -0.46
CDKL1-209ENST00000534267 PCDH11YQ9BZA8 1340 aa12.17□□□□□ -0.46
CDKL1-209ENST00000534267 APAF1O14727 1248 aa12.17□□□□□ -0.46
CDKL1-209ENST00000534267 PDE3BQ13370 1112 aa12.17□□□□□ -0.46
CDKL1-209ENST00000534267 ZNF530Q6P9A1 599 aaPredicted RBP12.17□□□□□ -0.46
CDKL1-209ENST00000534267 ILDR2Q71H61 639 aa12.17□□□□□ -0.46
CDKL1-209ENST00000534267 DDX54Q8TDD1 881 aaKnown RBP12.17□□□□□ -0.46
CDKL1-209ENST00000534267 DCAF5Q96JK2 942 aa12.17□□□□□ -0.46
CDKL1-209ENST00000534267 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
CDKL1-209ENST00000534267 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
CDKL1-209ENST00000534267 CEMIPQ8WUJ3 1361 aa12.17□□□□□ -0.46
CDKL1-209ENST00000534267 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
CDKL1-209ENST00000534267 FAM196AQ6ZSG2 479 aa12.16□□□□□ -0.46
CDKL1-209ENST00000534267 CCDC146Q8IYE0 955 aa12.16□□□□□ -0.46
CDKL1-209ENST00000534267 LGR6Q9HBX8 967 aa12.16□□□□□ -0.46
CDKL1-209ENST00000534267 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.46
CDKL1-209ENST00000534267 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
CDKL1-209ENST00000534267 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
CDKL1-209ENST00000534267 NGEFQ8N5V2 710 aa12.15□□□□□ -0.46
CDKL1-209ENST00000534267 EP400Q96L91 3159 aa12.15□□□□□ -0.46
CDKL1-209ENST00000534267 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
CDKL1-209ENST00000534267 KDM6AO15550 1401 aaPredicted RBP12.14□□□□□ -0.47
CDKL1-209ENST00000534267 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
CDKL1-209ENST00000534267 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
CDKL1-209ENST00000534267 FAM182BQ5T319 152 aa12.14□□□□□ -0.47
CDKL1-209ENST00000534267 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
CDKL1-209ENST00000534267 LRRC37A3O60309 1634 aa12.14□□□□□ -0.47
CDKL1-209ENST00000534267 ZNF521Q96K83 1311 aa12.13□□□□□ -0.47
CDKL1-209ENST00000534267 RIPK4P57078 832 aa12.13□□□□□ -0.47
CDKL1-209ENST00000534267 MPRIPQ6WCQ1 1025 aa12.13□□□□□ -0.47
CDKL1-209ENST00000534267 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
CDKL1-209ENST00000534267 KCNQ2O43526 872 aa12.12□□□□□ -0.47
CDKL1-209ENST00000534267 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
CDKL1-209ENST00000534267 C1orf141Q5JVX7 400 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms