RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 SHANK3Q9BYB0 1731 aa17.87■□□□□ 0.45
TRAPPC4-214ENST00000533632 KDRP35968 1356 aa17.86■□□□□ 0.45
TRAPPC4-214ENST00000533632 SULT6B1Q6IMI4 303 aa17.86■□□□□ 0.45
TRAPPC4-214ENST00000533632 MEGF6O75095 1541 aa17.85■□□□□ 0.45
TRAPPC4-214ENST00000533632 RSPH6AQ9H0K4 717 aa17.85■□□□□ 0.45
TRAPPC4-214ENST00000533632 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
TRAPPC4-214ENST00000533632 PLEKHF1Q96S99 279 aa17.83■□□□□ 0.44
TRAPPC4-214ENST00000533632 A0A0G2JS52 829 aa17.82■□□□□ 0.44
TRAPPC4-214ENST00000533632 MYT1Q01538 1121 aa17.82■□□□□ 0.44
TRAPPC4-214ENST00000533632 TNS2Q63HR2 1409 aa17.82■□□□□ 0.44
TRAPPC4-214ENST00000533632 PRKAR2BP31323 418 aa17.81■□□□□ 0.44
TRAPPC4-214ENST00000533632 KRT27Q7Z3Y8 459 aa17.81■□□□□ 0.44
TRAPPC4-214ENST00000533632 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
TRAPPC4-214ENST00000533632 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
TRAPPC4-214ENST00000533632 FCHSD2O94868 740 aa17.81■□□□□ 0.44
TRAPPC4-214ENST00000533632 IL2RBP14784 551 aa17.81■□□□□ 0.44
TRAPPC4-214ENST00000533632 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-214ENST00000533632 OVOS2A0A0G2JMS6 1433 aa17.8■□□□□ 0.44
TRAPPC4-214ENST00000533632 FAM182BQ5T319 152 aa17.8■□□□□ 0.44
TRAPPC4-214ENST00000533632 PHACTR3Q96KR7 559 aa17.8■□□□□ 0.44
TRAPPC4-214ENST00000533632 SBF2Q86WG5 1849 aa17.79■□□□□ 0.44
TRAPPC4-214ENST00000533632 DDB1Q16531 1140 aa17.79■□□□□ 0.44
TRAPPC4-214ENST00000533632 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.44
TRAPPC4-214ENST00000533632 MARCH10Q8NA82 808 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC4-214ENST00000533632 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
TRAPPC4-214ENST00000533632 EXOC5O00471 708 aa17.75■□□□□ 0.43
TRAPPC4-214ENST00000533632 SOCS7O14512 581 aa17.74■□□□□ 0.43
TRAPPC4-214ENST00000533632 APAF1O14727 1248 aa17.74■□□□□ 0.43
TRAPPC4-214ENST00000533632 HNRNPUQ00839 825 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRAPPC4-214ENST00000533632 PDE3BQ13370 1112 aa17.74■□□□□ 0.43
TRAPPC4-214ENST00000533632 TNS1Q9HBL0 1735 aaKnown RBP17.74■□□□□ 0.43
TRAPPC4-214ENST00000533632 RAPGEF4Q8WZA2 1011 aa17.74■□□□□ 0.43
TRAPPC4-214ENST00000533632 UPF1Q92900 1129 aaKnown RBP eCLIP17.73■□□□□ 0.43
TRAPPC4-214ENST00000533632 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-214ENST00000533632 BCL9O00512 1426 aa17.73■□□□□ 0.43
TRAPPC4-214ENST00000533632 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
TRAPPC4-214ENST00000533632 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC4-214ENST00000533632 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
TRAPPC4-214ENST00000533632 ZCRB1Q8TBF4 217 aaKnown RBP17.71■□□□□ 0.43
TRAPPC4-214ENST00000533632 PLEKHG2Q9H7P9 1386 aa17.71■□□□□ 0.43
TRAPPC4-214ENST00000533632 PNNQ9H307 717 aaKnown RBP17.71■□□□□ 0.43
TRAPPC4-214ENST00000533632 TOGARAM1Q9Y4F4 1720 aa17.71■□□□□ 0.43
TRAPPC4-214ENST00000533632 DOT1LQ8TEK3 1739 aa17.7■□□□□ 0.42
TRAPPC4-214ENST00000533632 VIRMAQ69YN4 1812 aaKnown RBP17.7■□□□□ 0.42
TRAPPC4-214ENST00000533632 TMPOP42166 694 aaKnown RBP17.7■□□□□ 0.42
TRAPPC4-214ENST00000533632 CYP27B1O15528 508 aa17.69■□□□□ 0.42
TRAPPC4-214ENST00000533632 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
TRAPPC4-214ENST00000533632 NHSQ6T4R5 1651 aa17.69■□□□□ 0.42
TRAPPC4-214ENST00000533632 NEUROD2Q15784 382 aa17.68■□□□□ 0.42
TRAPPC4-214ENST00000533632 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
TRAPPC4-214ENST00000533632 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC4-214ENST00000533632 KAT6BQ8WYB5 2073 aa17.68■□□□□ 0.42
TRAPPC4-214ENST00000533632 ZBED9Q6R2W3 1325 aa17.68■□□□□ 0.42
TRAPPC4-214ENST00000533632 DDX54Q8TDD1 881 aaKnown RBP17.68■□□□□ 0.42
TRAPPC4-214ENST00000533632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.42
TRAPPC4-214ENST00000533632 PTF1AQ7RTS3 328 aa17.67■□□□□ 0.42
TRAPPC4-214ENST00000533632 NEFMP07197 916 aa17.66■□□□□ 0.42
TRAPPC4-214ENST00000533632 PLEKHO1Q53GL0 409 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-214ENST00000533632 PCDH11XQ9BZA7 1347 aa17.66■□□□□ 0.42
TRAPPC4-214ENST00000533632 PCDH11YQ9BZA8 1340 aa17.66■□□□□ 0.42
TRAPPC4-214ENST00000533632 AMOTQ4VCS5 1084 aa17.66■□□□□ 0.42
TRAPPC4-214ENST00000533632 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-214ENST00000533632 TRIM35Q9UPQ4 493 aa17.66■□□□□ 0.42
TRAPPC4-214ENST00000533632 ITGB4P16144 1822 aa17.65■□□□□ 0.42
TRAPPC4-214ENST00000533632 ADAMTS7Q9UKP4 1686 aa17.65■□□□□ 0.42
TRAPPC4-214ENST00000533632 RIPK4P57078 832 aa17.65■□□□□ 0.42
TRAPPC4-214ENST00000533632 GAS2L2Q8NHY3 880 aa17.65■□□□□ 0.42
TRAPPC4-214ENST00000533632 TRIM37O94972 964 aa17.64■□□□□ 0.41
TRAPPC4-214ENST00000533632 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
TRAPPC4-214ENST00000533632 BTAF1O14981 1849 aa17.64■□□□□ 0.41
TRAPPC4-214ENST00000533632 MAP3K5Q99683 1374 aa17.64■□□□□ 0.41
TRAPPC4-214ENST00000533632 SCN11AQ9UI33 1791 aa17.64■□□□□ 0.41
TRAPPC4-214ENST00000533632 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
TRAPPC4-214ENST00000533632 KCNQ2O43526 872 aa17.63■□□□□ 0.41
TRAPPC4-214ENST00000533632 PHKG2P15735 406 aa17.63■□□□□ 0.41
TRAPPC4-214ENST00000533632 NKX1-1Q15270 411 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC4-214ENST00000533632 KDM6AO15550 1401 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC4-214ENST00000533632 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
TRAPPC4-214ENST00000533632 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
TRAPPC4-214ENST00000533632 AKAP4Q5JQC9 854 aa17.61■□□□□ 0.41
TRAPPC4-214ENST00000533632 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
TRAPPC4-214ENST00000533632 ACSBG1Q96GR2 724 aa17.61■□□□□ 0.41
TRAPPC4-214ENST00000533632 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
TRAPPC4-214ENST00000533632 CCDC27Q2M243 656 aa17.61■□□□□ 0.41
TRAPPC4-214ENST00000533632 MCM10Q7L590 875 aa17.61■□□□□ 0.41
TRAPPC4-214ENST00000533632 CCDC125Q86Z20 511 aa17.6■□□□□ 0.41
TRAPPC4-214ENST00000533632 IFNL2Q8IZJ0 200 aa17.6■□□□□ 0.41
TRAPPC4-214ENST00000533632 RGPD3A6NKT7 1758 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC4-214ENST00000533632 RGPD4Q7Z3J3 1758 aa17.59■□□□□ 0.41
TRAPPC4-214ENST00000533632 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
TRAPPC4-214ENST00000533632 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
TRAPPC4-214ENST00000533632 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
TRAPPC4-214ENST00000533632 IL17REQ8NFR9 667 aa17.59■□□□□ 0.41
TRAPPC4-214ENST00000533632 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC4-214ENST00000533632 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
TRAPPC4-214ENST00000533632 SIPA1L3O60292 1781 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC4-214ENST00000533632 DEFB132Q7Z7B7 95 aa17.58■□□□□ 0.41
TRAPPC4-214ENST00000533632 CEMIPQ8WUJ3 1361 aa17.58■□□□□ 0.41
TRAPPC4-214ENST00000533632 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.4
TRAPPC4-214ENST00000533632 RREB1Q92766 1687 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms