RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
RPUSD4-208ENST00000533628 PLEKHG2Q9H7P9 1386 aa17.04■□□□□ 0.32
RPUSD4-208ENST00000533628 A0A0G2JS52 829 aa17.03■□□□□ 0.32
RPUSD4-208ENST00000533628 HMOX1P09601 288 aa17.03■□□□□ 0.32
RPUSD4-208ENST00000533628 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
RPUSD4-208ENST00000533628 PKD1L3Q7Z443 1732 aa17.03■□□□□ 0.32
RPUSD4-208ENST00000533628 EXOC5O00471 708 aa17.03■□□□□ 0.32
RPUSD4-208ENST00000533628 KRT27Q7Z3Y8 459 aa17.03■□□□□ 0.32
RPUSD4-208ENST00000533628 MARCH10Q8NA82 808 aaPredicted RBP17.01■□□□□ 0.31
RPUSD4-208ENST00000533628 ZCRB1Q8TBF4 217 aaKnown RBP17.01■□□□□ 0.31
RPUSD4-208ENST00000533628 RSPH6AQ9H0K4 717 aa17.01■□□□□ 0.31
RPUSD4-208ENST00000533628 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
RPUSD4-208ENST00000533628 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
RPUSD4-208ENST00000533628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.01■□□□□ 0.31
RPUSD4-208ENST00000533628 PDE3BQ13370 1112 aa17■□□□□ 0.31
RPUSD4-208ENST00000533628 FCHSD2O94868 740 aa16.99■□□□□ 0.31
RPUSD4-208ENST00000533628 FAM182BQ5T319 152 aa16.98■□□□□ 0.31
RPUSD4-208ENST00000533628 BCL9O00512 1426 aa16.97■□□□□ 0.31
RPUSD4-208ENST00000533628 CYP27B1O15528 508 aa16.97■□□□□ 0.31
RPUSD4-208ENST00000533628 PRKAR2BP31323 418 aa16.97■□□□□ 0.31
RPUSD4-208ENST00000533628 PNISRQ8TF01 805 aaKnown RBP16.97■□□□□ 0.31
RPUSD4-208ENST00000533628 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
RPUSD4-208ENST00000533628 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
RPUSD4-208ENST00000533628 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
RPUSD4-208ENST00000533628 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
RPUSD4-208ENST00000533628 DDX54Q8TDD1 881 aaKnown RBP16.96■□□□□ 0.31
RPUSD4-208ENST00000533628 PHACTR3Q96KR7 559 aa16.96■□□□□ 0.31
RPUSD4-208ENST00000533628 MRS2Q9HD23 443 aa16.96■□□□□ 0.31
RPUSD4-208ENST00000533628 MIER1Q8N108 512 aa16.95■□□□□ 0.3
RPUSD4-208ENST00000533628 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
RPUSD4-208ENST00000533628 PCDH11XQ9BZA7 1347 aa16.95■□□□□ 0.3
RPUSD4-208ENST00000533628 PCDH11YQ9BZA8 1340 aa16.95■□□□□ 0.3
RPUSD4-208ENST00000533628 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
RPUSD4-208ENST00000533628 MTHFSDQ2M296 383 aaKnown RBP16.94■□□□□ 0.3
RPUSD4-208ENST00000533628 BCL11AQ9H165 835 aa16.94■□□□□ 0.3
RPUSD4-208ENST00000533628 PHKG2P15735 406 aa16.93■□□□□ 0.3
RPUSD4-208ENST00000533628 FAM196AQ6ZSG2 479 aa16.93■□□□□ 0.3
RPUSD4-208ENST00000533628 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
RPUSD4-208ENST00000533628 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
RPUSD4-208ENST00000533628 SBF2Q86WG5 1849 aa16.92■□□□□ 0.3
RPUSD4-208ENST00000533628 ZNF530Q6P9A1 599 aaPredicted RBP16.92■□□□□ 0.3
RPUSD4-208ENST00000533628 IFNL2Q8IZJ0 200 aa16.92■□□□□ 0.3
RPUSD4-208ENST00000533628 EP400Q96L91 3159 aa16.9■□□□□ 0.3
RPUSD4-208ENST00000533628 TOGARAM1Q9Y4F4 1720 aa16.89■□□□□ 0.3
RPUSD4-208ENST00000533628 PNNQ9H307 717 aaKnown RBP16.89■□□□□ 0.29
RPUSD4-208ENST00000533628 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
RPUSD4-208ENST00000533628 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.29
RPUSD4-208ENST00000533628 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
RPUSD4-208ENST00000533628 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
RPUSD4-208ENST00000533628 ADAMTS7Q9UKP4 1686 aa16.88■□□□□ 0.29
RPUSD4-208ENST00000533628 DOT1LQ8TEK3 1739 aa16.88■□□□□ 0.29
RPUSD4-208ENST00000533628 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
RPUSD4-208ENST00000533628 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
RPUSD4-208ENST00000533628 UPF1Q92900 1129 aaKnown RBP eCLIP16.87■□□□□ 0.292e-8■■■■■ 41.9
RPUSD4-208ENST00000533628 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
RPUSD4-208ENST00000533628 KCNQ2O43526 872 aa16.87■□□□□ 0.29
RPUSD4-208ENST00000533628 TRIM37O94972 964 aa16.86■□□□□ 0.29
RPUSD4-208ENST00000533628 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
RPUSD4-208ENST00000533628 C1orf141Q5JVX7 400 aa16.86■□□□□ 0.29
RPUSD4-208ENST00000533628 ACSBG1Q96GR2 724 aa16.86■□□□□ 0.29
RPUSD4-208ENST00000533628 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
RPUSD4-208ENST00000533628 TNS1Q9HBL0 1735 aaKnown RBP16.85■□□□□ 0.29
RPUSD4-208ENST00000533628 NFE2L2Q16236 605 aa16.85■□□□□ 0.29
RPUSD4-208ENST00000533628 MPRIPQ6WCQ1 1025 aa16.85■□□□□ 0.29
RPUSD4-208ENST00000533628 BCL11BQ9C0K0 894 aaPredicted RBP16.85■□□□□ 0.29
RPUSD4-208ENST00000533628 MAP3K5Q99683 1374 aa16.85■□□□□ 0.29
RPUSD4-208ENST00000533628 SCN11AQ9UI33 1791 aa16.85■□□□□ 0.29
RPUSD4-208ENST00000533628 PRIM1P49642 420 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-208ENST00000533628 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
RPUSD4-208ENST00000533628 MAPK8IP3Q9UPT6 1336 aa16.84■□□□□ 0.29
RPUSD4-208ENST00000533628 DLG5Q8TDM6 1919 aa16.84■□□□□ 0.29
RPUSD4-208ENST00000533628 ITGB4P16144 1822 aa16.84■□□□□ 0.29
RPUSD4-208ENST00000533628 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
RPUSD4-208ENST00000533628 RNMTO43148 476 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-208ENST00000533628 IL17REQ8NFR9 667 aa16.84■□□□□ 0.29
RPUSD4-208ENST00000533628 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
RPUSD4-208ENST00000533628 ERVV-2B6SEH9 535 aa16.82■□□□□ 0.28
RPUSD4-208ENST00000533628 NEFMP07197 916 aa16.82■□□□□ 0.28
RPUSD4-208ENST00000533628 CCDC125Q86Z20 511 aa16.82■□□□□ 0.28
RPUSD4-208ENST00000533628 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
RPUSD4-208ENST00000533628 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
RPUSD4-208ENST00000533628 HTATSF1O43719 755 aaKnown RBP16.82■□□□□ 0.28
RPUSD4-208ENST00000533628 MRC1P22897 1456 aa16.82■□□□□ 0.28
RPUSD4-208ENST00000533628 CEMIPQ8WUJ3 1361 aa16.81■□□□□ 0.28
RPUSD4-208ENST00000533628 BTAF1O14981 1849 aa16.81■□□□□ 0.28
RPUSD4-208ENST00000533628 SOCS7O14512 581 aa16.81■□□□□ 0.28
RPUSD4-208ENST00000533628 APAF1O14727 1248 aa16.8■□□□□ 0.28
RPUSD4-208ENST00000533628 PIGBQ92521 554 aa16.8■□□□□ 0.28
RPUSD4-208ENST00000533628 RRP7AQ9Y3A4 280 aaKnown RBP16.79■□□□□ 0.28
RPUSD4-208ENST00000533628 RIPK4P57078 832 aa16.79■□□□□ 0.28
RPUSD4-208ENST00000533628 DCTN1Q14203 1278 aa16.79■□□□□ 0.28
RPUSD4-208ENST00000533628 SYTL4Q96C24 671 aaPredicted RBP16.79■□□□□ 0.28
RPUSD4-208ENST00000533628 MCM10Q7L590 875 aa16.78■□□□□ 0.28
RPUSD4-208ENST00000533628 SLC52A2Q9HAB3 445 aa16.78■□□□□ 0.28
RPUSD4-208ENST00000533628 TRIM35Q9UPQ4 493 aa16.78■□□□□ 0.28
RPUSD4-208ENST00000533628 KAT6BQ8WYB5 2073 aa16.78■□□□□ 0.28
RPUSD4-208ENST00000533628 SIPA1L3O60292 1781 aaPredicted RBP16.78■□□□□ 0.28
RPUSD4-208ENST00000533628 APBA3O96018 575 aa16.77■□□□□ 0.28
RPUSD4-208ENST00000533628 CABP4P57796 275 aa16.77■□□□□ 0.28
RPUSD4-208ENST00000533628 NFATC2IPQ8NCF5 419 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms