RNA–Protein interactions for RNA: ENST00000532705.1

COMMD9-206, Transcript of COMM domain containing 9, humanhuman

TSL 2 BASIC

Gene COMMD9, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-206ENST00000532705 UPF1Q92900 1129 aaKnown RBP eCLIP13.84□□□□□ -0.19
COMMD9-206ENST00000532705 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
COMMD9-206ENST00000532705 DISP2A7MBM2 1401 aa13.83□□□□□ -0.2
COMMD9-206ENST00000532705 EYA1Q99502 592 aa13.83□□□□□ -0.2
COMMD9-206ENST00000532705 PARP4Q9UKK3 1724 aaKnown RBP13.82□□□□□ -0.2
COMMD9-206ENST00000532705 DIAPH1O60610 1272 aaKnown RBP13.82□□□□□ -0.2
COMMD9-206ENST00000532705 ZCRB1Q8TBF4 217 aaKnown RBP13.82□□□□□ -0.2
COMMD9-206ENST00000532705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
COMMD9-206ENST00000532705 OVOS2A0A0G2JMS6 1433 aa13.81□□□□□ -0.2
COMMD9-206ENST00000532705 BCL9O00512 1426 aa13.81□□□□□ -0.2
COMMD9-206ENST00000532705 PEAK1Q9H792 1746 aa13.81□□□□□ -0.2
COMMD9-206ENST00000532705 CNGB1Q14028 1251 aaPredicted RBP13.81□□□□□ -0.2
COMMD9-206ENST00000532705 NUDCQ9Y266 331 aa13.81□□□□□ -0.2
COMMD9-206ENST00000532705 PPP2R1AP30153 589 aa13.8□□□□□ -0.2
COMMD9-206ENST00000532705 IL13P35225 146 aa13.8□□□□□ -0.2
COMMD9-206ENST00000532705 SPG7Q9UQ90 795 aa13.8□□□□□ -0.2
COMMD9-206ENST00000532705 IGSF1Q8N6C5 1336 aa13.8□□□□□ -0.2
COMMD9-206ENST00000532705 BRWD3Q6RI45 1802 aa13.8□□□□□ -0.2
COMMD9-206ENST00000532705 NCAPD2Q15021 1401 aa13.8□□□□□ -0.2
COMMD9-206ENST00000532705 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
COMMD9-206ENST00000532705 PARD3Q8TEW0 1356 aa13.79□□□□□ -0.2
COMMD9-206ENST00000532705 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
COMMD9-206ENST00000532705 USHBP1Q8N6Y0 703 aa13.78□□□□□ -0.2
COMMD9-206ENST00000532705 MARCH10Q8NA82 808 aaPredicted RBP13.78□□□□□ -0.2
COMMD9-206ENST00000532705 DSG3P32926 999 aa13.77□□□□□ -0.21
COMMD9-206ENST00000532705 BAG6P46379 1132 aa13.77□□□□□ -0.21
COMMD9-206ENST00000532705 PLEKHO1Q53GL0 409 aaPredicted RBP13.77□□□□□ -0.21
COMMD9-206ENST00000532705 DDX54Q8TDD1 881 aaKnown RBP13.77□□□□□ -0.21
COMMD9-206ENST00000532705 PCDH11XQ9BZA7 1347 aa13.77□□□□□ -0.21
COMMD9-206ENST00000532705 PCDH11YQ9BZA8 1340 aa13.77□□□□□ -0.21
COMMD9-206ENST00000532705 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
COMMD9-206ENST00000532705 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
COMMD9-206ENST00000532705 KDRP35968 1356 aa13.75□□□□□ -0.21
COMMD9-206ENST00000532705 MYBBP1AQ9BQG0 1328 aaKnown RBP13.75□□□□□ -0.21
COMMD9-206ENST00000532705 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
COMMD9-206ENST00000532705 HMGB2P26583 209 aaKnown RBP13.75□□□□□ -0.21
COMMD9-206ENST00000532705 FAM182BQ5T319 152 aa13.75□□□□□ -0.21
COMMD9-206ENST00000532705 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
COMMD9-206ENST00000532705 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
COMMD9-206ENST00000532705 LRRC37A3O60309 1634 aa13.75□□□□□ -0.21
COMMD9-206ENST00000532705 TRIM37O94972 964 aa13.74□□□□□ -0.21
COMMD9-206ENST00000532705 IFNL2Q8IZJ0 200 aa13.74□□□□□ -0.21
COMMD9-206ENST00000532705 MEGF6O75095 1541 aa13.74□□□□□ -0.21
COMMD9-206ENST00000532705 U2SURPO15042 1029 aaKnown RBP13.73□□□□□ -0.21
COMMD9-206ENST00000532705 PRKRIP1Q9H875 184 aaPredicted RBP13.73□□□□□ -0.21
COMMD9-206ENST00000532705 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
COMMD9-206ENST00000532705 PLSCR1O15162 318 aa13.72□□□□□ -0.21
COMMD9-206ENST00000532705 FCHSD2O94868 740 aa13.72□□□□□ -0.21
COMMD9-206ENST00000532705 APBA3O96018 575 aa13.72□□□□□ -0.21
COMMD9-206ENST00000532705 NEFMP07197 916 aa13.72□□□□□ -0.21
COMMD9-206ENST00000532705 NKX1-1Q15270 411 aaPredicted RBP13.72□□□□□ -0.21
COMMD9-206ENST00000532705 ANP32CO43423 234 aa13.71□□□□□ -0.21
COMMD9-206ENST00000532705 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.21
COMMD9-206ENST00000532705 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
COMMD9-206ENST00000532705 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
COMMD9-206ENST00000532705 RGPD1P0DJD0 1748 aa13.7□□□□□ -0.22
COMMD9-206ENST00000532705 CYP27B1O15528 508 aa13.69□□□□□ -0.22
COMMD9-206ENST00000532705 HMOX1P09601 288 aa13.69□□□□□ -0.22
COMMD9-206ENST00000532705 PHKG2P15735 406 aa13.69□□□□□ -0.22
COMMD9-206ENST00000532705 DCAF5Q96JK2 942 aa13.69□□□□□ -0.22
COMMD9-206ENST00000532705 COL3A1P02461 1466 aaPredicted RBP13.68□□□□□ -0.22
COMMD9-206ENST00000532705 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
COMMD9-206ENST00000532705 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
COMMD9-206ENST00000532705 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
COMMD9-206ENST00000532705 EP400Q96L91 3159 aa13.67□□□□□ -0.22
COMMD9-206ENST00000532705 KAT6BQ8WYB5 2073 aa13.67□□□□□ -0.22
COMMD9-206ENST00000532705 ERVV-2B6SEH9 535 aa13.67□□□□□ -0.22
COMMD9-206ENST00000532705 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
COMMD9-206ENST00000532705 AKAP4Q5JQC9 854 aa13.67□□□□□ -0.22
COMMD9-206ENST00000532705 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
COMMD9-206ENST00000532705 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
COMMD9-206ENST00000532705 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
COMMD9-206ENST00000532705 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
COMMD9-206ENST00000532705 KCNQ2O43526 872 aa13.65□□□□□ -0.22
COMMD9-206ENST00000532705 ABCB7O75027 752 aa13.65□□□□□ -0.22
COMMD9-206ENST00000532705 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
COMMD9-206ENST00000532705 DEFB132Q7Z7B7 95 aa13.65□□□□□ -0.22
COMMD9-206ENST00000532705 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
COMMD9-206ENST00000532705 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
COMMD9-206ENST00000532705 SBF2Q86WG5 1849 aa13.64□□□□□ -0.23
COMMD9-206ENST00000532705 PRKAR2BP31323 418 aa13.64□□□□□ -0.23
COMMD9-206ENST00000532705 WDR43Q15061 677 aaKnown RBP eCLIP13.64□□□□□ -0.23
COMMD9-206ENST00000532705 NBPF14Q5TI25 921 aa13.64□□□□□ -0.23
COMMD9-206ENST00000532705 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
COMMD9-206ENST00000532705 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
COMMD9-206ENST00000532705 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
COMMD9-206ENST00000532705 HTATSF1O43719 755 aaKnown RBP13.62□□□□□ -0.23
COMMD9-206ENST00000532705 EZH2Q15910 746 aaKnown RBP13.62□□□□□ -0.23
COMMD9-206ENST00000532705 MTHFSDQ2M296 383 aaKnown RBP13.62□□□□□ -0.23
COMMD9-206ENST00000532705 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
COMMD9-206ENST00000532705 NHSQ6T4R5 1651 aa13.62□□□□□ -0.23
COMMD9-206ENST00000532705 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
COMMD9-206ENST00000532705 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
COMMD9-206ENST00000532705 CABP4P57796 275 aa13.61□□□□□ -0.23
COMMD9-206ENST00000532705 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
COMMD9-206ENST00000532705 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
COMMD9-206ENST00000532705 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
COMMD9-206ENST00000532705 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
COMMD9-206ENST00000532705 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
COMMD9-206ENST00000532705 RGPD3A6NKT7 1758 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms