RNA–Protein interactions for RNA: ENST00000532536.5

SHARPIN-206, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 3

Gene SHARPIN, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-206ENST00000532536 MSL1Q68DK7 614 aa9.55□□□□□ -0.88
SHARPIN-206ENST00000532536 NLRP13Q86W25 1043 aa9.55□□□□□ -0.88
SHARPIN-206ENST00000532536 COL23A1Q86Y22 540 aaPredicted RBP9.55□□□□□ -0.88
SHARPIN-206ENST00000532536 STAC3Q96MF2 364 aa9.55□□□□□ -0.88
SHARPIN-206ENST00000532536 KDM2AQ9Y2K7 1162 aa9.55□□□□□ -0.88
SHARPIN-206ENST00000532536 KCPQ6ZWJ8 1503 aa9.55□□□□□ -0.88
SHARPIN-206ENST00000532536 PPIP5K1Q6PFW1 1433 aa9.55□□□□□ -0.88
SHARPIN-206ENST00000532536 C5P01031 1676 aa9.55□□□□□ -0.88
SHARPIN-206ENST00000532536 DCAF11Q8TEB1 546 aa9.54□□□□□ -0.88
SHARPIN-206ENST00000532536 TIMELESSQ9UNS1 1208 aa9.54□□□□□ -0.88
SHARPIN-206ENST00000532536 TAF1LQ8IZX4 1826 aa9.54□□□□□ -0.88
SHARPIN-206ENST00000532536 MINK1Q8N4C8 1332 aaPredicted RBP9.54□□□□□ -0.88
SHARPIN-206ENST00000532536 KDM2BQ8NHM5 1336 aa9.54□□□□□ -0.88
SHARPIN-206ENST00000532536 CTCFP49711 727 aaPredicted RBP9.53□□□□□ -0.88
SHARPIN-206ENST00000532536 L3MBTL2Q969R5 705 aa9.53□□□□□ -0.88
SHARPIN-206ENST00000532536 AXIN2Q9Y2T1 843 aa9.53□□□□□ -0.88
SHARPIN-206ENST00000532536 VIRMAQ69YN4 1812 aaKnown RBP9.53□□□□□ -0.88
SHARPIN-206ENST00000532536 CPSF1Q10570 1443 aaKnown RBP9.53□□□□□ -0.88
SHARPIN-206ENST00000532536 ACEP12821 1306 aa9.53□□□□□ -0.88
SHARPIN-206ENST00000532536 N4BP2Q86UW6 1770 aaPredicted RBP9.52□□□□□ -0.88
SHARPIN-206ENST00000532536 MSH5O43196 834 aa9.52□□□□□ -0.89
SHARPIN-206ENST00000532536 SBF1O95248 1867 aa9.52□□□□□ -0.89
SHARPIN-206ENST00000532536 CFAP70Q5T0N1 1121 aa9.52□□□□□ -0.89
SHARPIN-206ENST00000532536 NUDT16Q96DE0 195 aaKnown RBP9.52□□□□□ -0.89
SHARPIN-206ENST00000532536 TONSLQ96HA7 1378 aa9.51□□□□□ -0.89
SHARPIN-206ENST00000532536 DOT1LQ8TEK3 1739 aa9.51□□□□□ -0.89
SHARPIN-206ENST00000532536 TOGARAM1Q9Y4F4 1720 aa9.51□□□□□ -0.89
SHARPIN-206ENST00000532536 KCNQ4P56696 695 aa9.5□□□□□ -0.89
SHARPIN-206ENST00000532536 UBR3Q6ZT12 1888 aa9.5□□□□□ -0.89
SHARPIN-206ENST00000532536 PLEKHG3A1L390 1219 aa9.49□□□□□ -0.89
SHARPIN-206ENST00000532536 ZBTB7CA1YPR0 619 aa9.49□□□□□ -0.89
SHARPIN-206ENST00000532536 FLAD1Q8NFF5 587 aa9.49□□□□□ -0.89
SHARPIN-206ENST00000532536 RRAGCQ9HB90 399 aa9.49□□□□□ -0.89
SHARPIN-206ENST00000532536 C9orf131Q5VYM1 1079 aa9.48□□□□□ -0.89
SHARPIN-206ENST00000532536 NSD2O96028 1365 aa9.48□□□□□ -0.89
SHARPIN-206ENST00000532536 LBX1P52954 281 aa9.47□□□□□ -0.89
SHARPIN-206ENST00000532536 AIDAQ96BJ3 306 aa9.47□□□□□ -0.89
SHARPIN-206ENST00000532536 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
SHARPIN-206ENST00000532536 CCNL1Q9UK58 526 aaPredicted RBP9.47□□□□□ -0.89
SHARPIN-206ENST00000532536 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
SHARPIN-206ENST00000532536 CCDC85CA6NKD9 419 aa9.46□□□□□ -0.9
SHARPIN-206ENST00000532536 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
SHARPIN-206ENST00000532536 ARHGAP27Q6ZUM4 889 aa9.46□□□□□ -0.9
SHARPIN-206ENST00000532536 ARHGEF25Q86VW2 580 aa9.46□□□□□ -0.9
SHARPIN-206ENST00000532536 TRAK1Q9UPV9 953 aa9.46□□□□□ -0.9
SHARPIN-206ENST00000532536 CNTNAP1P78357 1384 aa9.46□□□□□ -0.9
SHARPIN-206ENST00000532536 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.9
SHARPIN-206ENST00000532536 C4BP0C0L5 1744 aa9.45□□□□□ -0.9
SHARPIN-206ENST00000532536 IL2RBP14784 551 aa9.45□□□□□ -0.9
SHARPIN-206ENST00000532536 WBP1LQ9NX94 342 aa9.45□□□□□ -0.9
SHARPIN-206ENST00000532536 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
SHARPIN-206ENST00000532536 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
SHARPIN-206ENST00000532536 HMGB2P26583 209 aaKnown RBP9.44□□□□□ -0.9
SHARPIN-206ENST00000532536 ZEB1P37275 1124 aaPredicted RBP9.44□□□□□ -0.9
SHARPIN-206ENST00000532536 NLRP6P59044 892 aa9.44□□□□□ -0.9
SHARPIN-206ENST00000532536 TGFB2P61812 414 aa9.44□□□□□ -0.9
SHARPIN-206ENST00000532536 ZC3H4Q9UPT8 1303 aaKnown RBP9.44□□□□□ -0.9
SHARPIN-206ENST00000532536 NFAT5O94916 1531 aa9.44□□□□□ -0.9
SHARPIN-206ENST00000532536 HSPA8P11142 646 aaKnown RBP9.43□□□□□ -0.9
SHARPIN-206ENST00000532536 NSD3Q9BZ95 1437 aa9.42□□□□□ -0.9
SHARPIN-206ENST00000532536 VEGFAP15692 232 aaPredicted RBP9.42□□□□□ -0.9
SHARPIN-206ENST00000532536 NBPF1Q3BBV0 1214 aa9.42□□□□□ -0.9
SHARPIN-206ENST00000532536 CDK19Q9BWU1 502 aa9.42□□□□□ -0.9
SHARPIN-206ENST00000532536 RNF181Q9P0P0 153 aa9.42□□□□□ -0.9
SHARPIN-206ENST00000532536 TIAM2Q8IVF5 1701 aa9.42□□□□□ -0.9
SHARPIN-206ENST00000532536 KDM6AO15550 1401 aaPredicted RBP9.41□□□□□ -0.9
SHARPIN-206ENST00000532536 ERBB3P21860 1342 aa9.41□□□□□ -0.9
SHARPIN-206ENST00000532536 PRPF38BQ5VTL8 546 aaKnown RBP9.41□□□□□ -0.9
SHARPIN-206ENST00000532536 KCNH5Q8NCM2 988 aa9.41□□□□□ -0.9
SHARPIN-206ENST00000532536 LTN1O94822 1766 aa9.4□□□□□ -0.9
SHARPIN-206ENST00000532536 USP47Q96K76 1375 aa9.4□□□□□ -0.9
SHARPIN-206ENST00000532536 FAM208AQ9UK61 1670 aaKnown RBP9.4□□□□□ -0.9
SHARPIN-206ENST00000532536 FCHSD2O94868 740 aa9.4□□□□□ -0.9
SHARPIN-206ENST00000532536 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
SHARPIN-206ENST00000532536 THSD7BQ9C0I4 1608 aa9.4□□□□□ -0.9
SHARPIN-206ENST00000532536 CCDC88AQ3V6T2 1871 aa9.39□□□□□ -0.91
SHARPIN-206ENST00000532536 A0A0G2JLW4 131 aa9.39□□□□□ -0.91
SHARPIN-206ENST00000532536 SYTL4Q96C24 671 aaPredicted RBP9.39□□□□□ -0.91
SHARPIN-206ENST00000532536 GLTPD2A6NH11 291 aa9.38□□□□□ -0.91
SHARPIN-206ENST00000532536 VEGFBP49765 207 aa9.38□□□□□ -0.91
SHARPIN-206ENST00000532536 AMIGO3Q86WK7 504 aa9.38□□□□□ -0.91
SHARPIN-206ENST00000532536 DCAF5Q96JK2 942 aa9.38□□□□□ -0.91
SHARPIN-206ENST00000532536 CARD11Q9BXL7 1154 aa9.38□□□□□ -0.91
SHARPIN-206ENST00000532536 C4AP0C0L4 1744 aa9.38□□□□□ -0.91
SHARPIN-206ENST00000532536 CUL9Q8IWT3 2517 aa9.38□□□□□ -0.91
SHARPIN-206ENST00000532536 SSFA2P28290 1259 aa9.37□□□□□ -0.91
SHARPIN-206ENST00000532536 NLRP2Q9NX02 1062 aa9.37□□□□□ -0.91
SHARPIN-206ENST00000532536 ROCK2O75116 1388 aaKnown RBP9.37□□□□□ -0.91
SHARPIN-206ENST00000532536 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.36□□□□□ -0.91
SHARPIN-206ENST00000532536 DPEP1P16444 411 aa9.36□□□□□ -0.91
SHARPIN-206ENST00000532536 DDX54Q8TDD1 881 aaKnown RBP9.36□□□□□ -0.91
SHARPIN-206ENST00000532536 MAP2P11137 1827 aaKnown RBP9.35□□□□□ -0.91
SHARPIN-206ENST00000532536 POTECB2RU33 542 aa9.35□□□□□ -0.91
SHARPIN-206ENST00000532536 MMP10P09238 476 aa9.35□□□□□ -0.91
SHARPIN-206ENST00000532536 KCNA3P22001 575 aa9.35□□□□□ -0.91
SHARPIN-206ENST00000532536 MAP2K1Q02750 393 aaPredicted RBP9.35□□□□□ -0.91
SHARPIN-206ENST00000532536 AK7Q96M32 723 aa9.35□□□□□ -0.91
SHARPIN-206ENST00000532536 DICER1Q9UPY3 1922 aaKnown RBP9.35□□□□□ -0.91
SHARPIN-206ENST00000532536 PASKQ96RG2 1323 aa9.34□□□□□ -0.91
SHARPIN-206ENST00000532536 CHADLQ6NUI6 762 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms