RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 DHX9Q08211 1270 aaKnown RBP13.38□□□□□ -0.27
KNL1-209ENST00000532347 TRIM67Q6ZTA4 783 aa13.38□□□□□ -0.27
KNL1-209ENST00000532347 TMPRSS4Q9NRS4 437 aa13.38□□□□□ -0.27
KNL1-209ENST00000532347 NOD1Q9Y239 953 aa13.38□□□□□ -0.27
KNL1-209ENST00000532347 WIZO95785 1651 aa13.37□□□□□ -0.27
KNL1-209ENST00000532347 ATP5J2-PTCD1G3V325 749 aa13.37□□□□□ -0.27
KNL1-209ENST00000532347 USP4Q13107 963 aa13.37□□□□□ -0.27
KNL1-209ENST00000532347 RETREG2Q8NC44 543 aa13.37□□□□□ -0.27
KNL1-209ENST00000532347 WASF2Q9Y6W5 498 aa13.37□□□□□ -0.27
KNL1-209ENST00000532347 TTC24A2A3L6 582 aaPredicted RBP13.36□□□□□ -0.27
KNL1-209ENST00000532347 RASA1P20936 1047 aa13.36□□□□□ -0.27
KNL1-209ENST00000532347 SCTRP47872 440 aa13.36□□□□□ -0.27
KNL1-209ENST00000532347 PPP1R26Q5T8A7 1209 aaPredicted RBP13.36□□□□□ -0.27
KNL1-209ENST00000532347 CYP4X1Q8N118 509 aa13.36□□□□□ -0.27
KNL1-209ENST00000532347 TOR4AQ9NXH8 423 aa13.36□□□□□ -0.27
KNL1-209ENST00000532347 J3QL48 77 aa13.35□□□□□ -0.27
KNL1-209ENST00000532347 CRTC2Q53ET0 693 aaPredicted RBP13.35□□□□□ -0.27
KNL1-209ENST00000532347 TRIM50Q86XT4 487 aa13.35□□□□□ -0.27
KNL1-209ENST00000532347 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 CLDN10P78369 228 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 PRR20EP86478 221 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 PRR20CP86479 221 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 PRR20DP86480 221 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 PRR20BP86481 221 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 PRR20AP86496 221 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 NNTQ13423 1086 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 OGFOD1Q8N543 542 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 ZNF784Q8NCA9 323 aaPredicted RBP13.34□□□□□ -0.27
KNL1-209ENST00000532347 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
KNL1-209ENST00000532347 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
KNL1-209ENST00000532347 PRDM2Q13029 1718 aa13.33□□□□□ -0.27
KNL1-209ENST00000532347 FAM196BA6NMK8 535 aa13.33□□□□□ -0.28
KNL1-209ENST00000532347 RGS20O76081 388 aa13.33□□□□□ -0.28
KNL1-209ENST00000532347 MYCP01106 439 aaPredicted RBP13.33□□□□□ -0.28
KNL1-209ENST00000532347 LARP1Q6PKG0 1096 aaKnown RBP13.33□□□□□ -0.28
KNL1-209ENST00000532347 CYLDQ9NQC7 956 aa13.33□□□□□ -0.28
KNL1-209ENST00000532347 USP17L15C9J2P7 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L10C9JJH3 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L13C9JLJ4 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L12C9JPN9 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L11C9JVI0 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L21D6R901 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L18D6R9N7 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L22D6RA61 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L17D6RBQ6 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L19D6RCP7 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L20D6RJB6 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 GTF2IP78347 998 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 USP17L24Q0WX57 530 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 PTK7Q13308 1070 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
KNL1-209ENST00000532347 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
KNL1-209ENST00000532347 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
KNL1-209ENST00000532347 ATP1A2P50993 1020 aa13.31□□□□□ -0.28
KNL1-209ENST00000532347 DNAAF2Q9NVR5 837 aaKnown RBP13.31□□□□□ -0.28
KNL1-209ENST00000532347 PCDHGA11Q9Y5H2 935 aa13.31□□□□□ -0.28
KNL1-209ENST00000532347 EMILIN1Q9Y6C2 1016 aa13.31□□□□□ -0.28
KNL1-209ENST00000532347 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
KNL1-209ENST00000532347 LILRA1O75019 489 aa13.3□□□□□ -0.28
KNL1-209ENST00000532347 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
KNL1-209ENST00000532347 SMPD1P17405 629 aa13.3□□□□□ -0.28
KNL1-209ENST00000532347 ELOAQ14241 798 aaKnown RBP13.3□□□□□ -0.28
KNL1-209ENST00000532347 ZNF594Q96JF6 807 aaPredicted RBP13.3□□□□□ -0.28
KNL1-209ENST00000532347 PGPEP1Q9NXJ5 209 aa13.3□□□□□ -0.28
KNL1-209ENST00000532347 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
KNL1-209ENST00000532347 NOVA2Q9UNW9 492 aaKnown RBP13.3□□□□□ -0.28
KNL1-209ENST00000532347 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
KNL1-209ENST00000532347 MYT1Q01538 1121 aa13.29□□□□□ -0.28
KNL1-209ENST00000532347 ESF1Q9H501 851 aaKnown RBP13.29□□□□□ -0.28
KNL1-209ENST00000532347 ZBTB7BO15156 539 aaPredicted RBP13.28□□□□□ -0.28
KNL1-209ENST00000532347 LARGE2Q8N3Y3 721 aa13.28□□□□□ -0.28
KNL1-209ENST00000532347 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
KNL1-209ENST00000532347 OSBPL3Q9H4L5 887 aa13.28□□□□□ -0.28
KNL1-209ENST00000532347 STK32AQ8WU08 396 aa13.27□□□□□ -0.29
KNL1-209ENST00000532347 KLF16Q9BXK1 252 aaPredicted RBP13.27□□□□□ -0.29
KNL1-209ENST00000532347 RIMBP3CA6NJZ7 1639 aa13.26□□□□□ -0.29
KNL1-209ENST00000532347 RIMBP3BA6NNM3 1639 aa13.26□□□□□ -0.29
KNL1-209ENST00000532347 PSME1Q06323 249 aa13.26□□□□□ -0.29
KNL1-209ENST00000532347 ANKMY2Q8IV38 441 aa13.26□□□□□ -0.29
KNL1-209ENST00000532347 RSF1Q96T23 1441 aaPredicted RBP13.26□□□□□ -0.29
KNL1-209ENST00000532347 RIMBP3Q9UFD9 1639 aa13.26□□□□□ -0.29
KNL1-209ENST00000532347 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
KNL1-209ENST00000532347 ADD1P35611 737 aaKnown RBP13.25□□□□□ -0.29
KNL1-209ENST00000532347 SIX5Q8N196 739 aa13.25□□□□□ -0.29
KNL1-209ENST00000532347 ITPKCQ96DU7 683 aa13.25□□□□□ -0.29
KNL1-209ENST00000532347 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
KNL1-209ENST00000532347 USTQ9Y2C2 406 aa13.25□□□□□ -0.29
KNL1-209ENST00000532347 CARNS1A5YM72 827 aa13.24□□□□□ -0.29
KNL1-209ENST00000532347 DKK1O94907 266 aa13.24□□□□□ -0.29
KNL1-209ENST00000532347 DPYDQ12882 1025 aa13.24□□□□□ -0.29
KNL1-209ENST00000532347 TMEM164Q5U3C3 297 aa13.24□□□□□ -0.29
KNL1-209ENST00000532347 CCDC102BQ68D86 513 aa13.24□□□□□ -0.29
KNL1-209ENST00000532347 TPCN2Q8NHX9 752 aa13.24□□□□□ -0.29
KNL1-209ENST00000532347 TMEM88BA6NKF7 163 aa13.23□□□□□ -0.29
KNL1-209ENST00000532347 ZIC2O95409 532 aaPredicted RBP13.23□□□□□ -0.29
KNL1-209ENST00000532347 WDR4P57081 412 aaKnown RBP13.23□□□□□ -0.29
KNL1-209ENST00000532347 FAM200AQ8TCP9 573 aa13.23□□□□□ -0.29
KNL1-209ENST00000532347 ZFAND3Q9H8U3 227 aa13.23□□□□□ -0.29
KNL1-209ENST00000532347 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
KNL1-209ENST00000532347 HPS1Q92902 700 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms