RNA–Protein interactions for RNA: ENST00000532224.5

PTPN22-209, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 2

Gene PTPN22, Length 2,421 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-209ENST00000532224 MAGI3Q5TCQ9 1506 aa3.38□□□□□ -1.87
PTPN22-209ENST00000532224 FAM69CQ0P6D2 419 aa3.38□□□□□ -1.87
PTPN22-209ENST00000532224 SCARF1Q14162 830 aa3.38□□□□□ -1.87
PTPN22-209ENST00000532224 BPHLQ86WA6 291 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-209ENST00000532224 GPKOWQ92917 476 aaPredicted RBP eCLIP3.38□□□□□ -1.87
PTPN22-209ENST00000532224 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
PTPN22-209ENST00000532224 PLXNC1O60486 1568 aa3.38□□□□□ -1.87
PTPN22-209ENST00000532224 CASKIN1Q8WXD9 1431 aa3.37□□□□□ -1.87
PTPN22-209ENST00000532224 ABCC10Q5T3U5 1492 aa3.37□□□□□ -1.87
PTPN22-209ENST00000532224 NUTM2BA6NNL0 878 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-209ENST00000532224 NUTM2EB1AL46 878 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-209ENST00000532224 TERTO14746 1132 aaKnown RBP3.37□□□□□ -1.87
PTPN22-209ENST00000532224 ADH1CP00326 375 aa3.37□□□□□ -1.87
PTPN22-209ENST00000532224 HRCP23327 699 aa3.37□□□□□ -1.87
PTPN22-209ENST00000532224 LORP23490 312 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-209ENST00000532224 PDE4DQ08499 809 aa3.37□□□□□ -1.87
PTPN22-209ENST00000532224 LINC01559Q495D7 138 aa3.37□□□□□ -1.87
PTPN22-209ENST00000532224 NUTM2DQ5VT03 806 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-209ENST00000532224 NUTM2AQ8IVF1 878 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-209ENST00000532224 ACIN1Q9UKV3 1341 aaKnown RBP3.37□□□□□ -1.87
PTPN22-209ENST00000532224 NEO1Q92859 1461 aa3.37□□□□□ -1.87
PTPN22-209ENST00000532224 TIAM1Q13009 1591 aa3.37□□□□□ -1.87
PTPN22-209ENST00000532224 RICTORQ6R327 1708 aa3.37□□□□□ -1.87
PTPN22-209ENST00000532224 F12P00748 615 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-209ENST00000532224 NR5A1Q13285 461 aa3.36□□□□□ -1.87
PTPN22-209ENST00000532224 PTPN23Q9H3S7 1636 aa3.36□□□□□ -1.87
PTPN22-209ENST00000532224 KCNMA1Q12791 1236 aa3.36□□□□□ -1.87
PTPN22-209ENST00000532224 NFX1Q12986 1120 aaKnown RBP3.36□□□□□ -1.87
PTPN22-209ENST00000532224 NNTQ13423 1086 aa3.36□□□□□ -1.87
PTPN22-209ENST00000532224 AGERQ15109 404 aa3.36□□□□□ -1.87
PTPN22-209ENST00000532224 TRIM52Q96A61 297 aa3.36□□□□□ -1.87
PTPN22-209ENST00000532224 CDK15Q96Q40 435 aa3.36□□□□□ -1.87
PTPN22-209ENST00000532224 GCC2Q8IWJ2 1684 aa3.36□□□□□ -1.87
PTPN22-209ENST00000532224 CFAP99D6REC4 459 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 UPP2O95045 317 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 SNRPBP14678 240 aaKnown RBP3.35□□□□□ -1.87
PTPN22-209ENST00000532224 MYSM1Q5VVJ2 828 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 PNMA1Q8ND90 353 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 PCDHB15Q9Y5E8 787 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 SHANK2Q9UPX8 1470 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 ARHGEF40Q8TER5 1519 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 KDM5CP41229 1560 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 INO80Q9ULG1 1556 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-209ENST00000532224 LILRB3O75022 631 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 CLK2P49760 499 aaKnown RBP3.35□□□□□ -1.87
PTPN22-209ENST00000532224 IRF7Q92985 503 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 NXF1Q9UBU9 619 aaKnown RBP3.35□□□□□ -1.87
PTPN22-209ENST00000532224 CDV3Q9UKY7 258 aaKnown RBP3.35□□□□□ -1.87
PTPN22-209ENST00000532224 MAP4K5Q9Y4K4 846 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 TLL2Q9Y6L7 1015 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 CDC42BPBQ9Y5S2 1711 aa3.35□□□□□ -1.87
PTPN22-209ENST00000532224 RNF17Q9BXT8 1623 aaKnown RBP3.35□□□□□ -1.87
PTPN22-209ENST00000532224 MAGI2Q86UL8 1455 aa3.34□□□□□ -1.87
PTPN22-209ENST00000532224 CEP162Q5TB80 1403 aa3.34□□□□□ -1.87
PTPN22-209ENST00000532224 UACAQ9BZF9 1416 aa3.34□□□□□ -1.87
PTPN22-209ENST00000532224 ZC3H4Q9UPT8 1303 aaKnown RBP3.34□□□□□ -1.87
PTPN22-209ENST00000532224 LAMC2Q13753 1193 aa3.34□□□□□ -1.87
PTPN22-209ENST00000532224 MRPL14Q6P1L8 145 aaKnown RBP3.34□□□□□ -1.87
PTPN22-209ENST00000532224 FAM9AQ8IZU1 332 aaPredicted RBP3.34□□□□□ -1.87
PTPN22-209ENST00000532224 KCTD17Q8N5Z5 321 aa3.34□□□□□ -1.87
PTPN22-209ENST00000532224 WDR4P57081 412 aaKnown RBP3.34□□□□□ -1.87
PTPN22-209ENST00000532224 CSPP1Q1MSJ5 1256 aa3.34□□□□□ -1.87
PTPN22-209ENST00000532224 TRMT44Q8IYL2 757 aaKnown RBP3.34□□□□□ -1.87
PTPN22-209ENST00000532224 CABLES1Q8TDN4 633 aa3.34□□□□□ -1.87
PTPN22-209ENST00000532224 TSC1Q92574 1164 aa3.34□□□□□ -1.87
PTPN22-209ENST00000532224 DDRGK1Q96HY6 314 aa3.34□□□□□ -1.87
PTPN22-209ENST00000532224 DEPDC5O75140 1603 aa3.34□□□□□ -1.88
PTPN22-209ENST00000532224 CLIP1P30622 1438 aa3.34□□□□□ -1.88
PTPN22-209ENST00000532224 AKNAQ7Z591 1439 aa3.34□□□□□ -1.88
PTPN22-209ENST00000532224 TIMP2P16035 220 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 TRIM46Q7Z4K8 759 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 C1QTNF2Q9BXJ5 285 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 MAP10Q9P2G4 905 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 NEURL4Q96JN8 1562 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 ARHGAP35Q9NRY4 1499 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.33□□□□□ -1.88
PTPN22-209ENST00000532224 BMP1P13497 986 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 ARID5BQ14865 1188 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 SLC24A3Q9HC58 644 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 LIMD1Q9UGP4 676 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 EMILIN1Q9Y6C2 1016 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 ABCC1P33527 1531 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 VPS8Q8N3P4 1428 aa3.33□□□□□ -1.88
PTPN22-209ENST00000532224 PRG4Q92954 1404 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-209ENST00000532224 ZNF142P52746 1687 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-209ENST00000532224 DNMT1P26358 1616 aaKnown RBP3.32□□□□□ -1.88
PTPN22-209ENST00000532224 TDRD9Q8NDG6 1382 aaKnown RBP3.32□□□□□ -1.88
PTPN22-209ENST00000532224 AGLP35573 1532 aa3.32□□□□□ -1.88
PTPN22-209ENST00000532224 H3BM21 787 aa3.32□□□□□ -1.88
PTPN22-209ENST00000532224 FOXJ1Q92949 421 aa3.32□□□□□ -1.88
PTPN22-209ENST00000532224 ZFP42Q96MM3 310 aa3.32□□□□□ -1.88
PTPN22-209ENST00000532224 NUP153P49790 1475 aaKnown RBP3.32□□□□□ -1.88
PTPN22-209ENST00000532224 TCOF1Q13428 1488 aaKnown RBP3.32□□□□□ -1.88
PTPN22-209ENST00000532224 ZIC2O95409 532 aaPredicted RBP3.32□□□□□ -1.88
PTPN22-209ENST00000532224 DHX9Q08211 1270 aaKnown RBP3.32□□□□□ -1.88
PTPN22-209ENST00000532224 SKIV2LQ15477 1246 aaKnown RBP3.32□□□□□ -1.88
PTPN22-209ENST00000532224 SH3D19Q5HYK7 790 aa3.32□□□□□ -1.88
PTPN22-209ENST00000532224 PDXDC2PQ6P474 469 aa3.32□□□□□ -1.88
PTPN22-209ENST00000532224 PGPEP1Q9NXJ5 209 aa3.32□□□□□ -1.88
PTPN22-209ENST00000532224 EPRSP07814 1512 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms