RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 MAP3K19Q56UN5 1328 aa18.65■□□□□ 0.58
SSH3-207ENST00000531495 USP47Q96K76 1375 aa18.65■□□□□ 0.58
SSH3-207ENST00000531495 BTAF1O14981 1849 aa18.65■□□□□ 0.58
SSH3-207ENST00000531495 CHD4Q14839 1912 aa18.64■□□□□ 0.58
SSH3-207ENST00000531495 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.57
SSH3-207ENST00000531495 CGNL1Q0VF96 1302 aa18.64■□□□□ 0.57
SSH3-207ENST00000531495 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
SSH3-207ENST00000531495 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
SSH3-207ENST00000531495 FLAD1Q8NFF5 587 aa18.63■□□□□ 0.57
SSH3-207ENST00000531495 UTRNP46939 3433 aa18.62■□□□□ 0.57
SSH3-207ENST00000531495 NLGN2Q8NFZ4 835 aa18.62■□□□□ 0.57
SSH3-207ENST00000531495 LTN1O94822 1766 aa18.61■□□□□ 0.57
SSH3-207ENST00000531495 USP54Q70EL1 1684 aa18.61■□□□□ 0.57
SSH3-207ENST00000531495 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
SSH3-207ENST00000531495 COL23A1Q86Y22 540 aaPredicted RBP18.61■□□□□ 0.57
SSH3-207ENST00000531495 ST20-MTHFSA0A0A6YYL1 179 aa18.6■□□□□ 0.57
SSH3-207ENST00000531495 FBLN1P23142 703 aa18.6■□□□□ 0.57
SSH3-207ENST00000531495 NBPF6Q5VWK0 638 aa18.59■□□□□ 0.57
SSH3-207ENST00000531495 NBPF4Q96M43 638 aa18.59■□□□□ 0.57
SSH3-207ENST00000531495 CD2APQ9Y5K6 639 aa18.58■□□□□ 0.56
SSH3-207ENST00000531495 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
SSH3-207ENST00000531495 RRS1Q15050 365 aaKnown RBP18.57■□□□□ 0.56
SSH3-207ENST00000531495 TESK2Q96S53 571 aa18.57■□□□□ 0.56
SSH3-207ENST00000531495 RTL1A6NKG5 1358 aa18.56■□□□□ 0.56
SSH3-207ENST00000531495 YBX3P16989 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
SSH3-207ENST00000531495 MSL1Q68DK7 614 aa18.56■□□□□ 0.56
SSH3-207ENST00000531495 USHBP1Q8N6Y0 703 aa18.56■□□□□ 0.56
SSH3-207ENST00000531495 NSD2O96028 1365 aa18.55■□□□□ 0.56
SSH3-207ENST00000531495 FYB1O15117 783 aa18.55■□□□□ 0.56
SSH3-207ENST00000531495 TMF1P82094 1093 aa18.55■□□□□ 0.56
SSH3-207ENST00000531495 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
SSH3-207ENST00000531495 SMARCC1Q92922 1105 aaPredicted RBP18.55■□□□□ 0.56
SSH3-207ENST00000531495 GGNBP2Q9H3C7 697 aa18.55■□□□□ 0.56
SSH3-207ENST00000531495 PCDH11XQ9BZA7 1347 aa18.54■□□□□ 0.56
SSH3-207ENST00000531495 PCDH11YQ9BZA8 1340 aa18.54■□□□□ 0.56
SSH3-207ENST00000531495 FAM208AQ9UK61 1670 aaKnown RBP18.54■□□□□ 0.56
SSH3-207ENST00000531495 AK7Q96M32 723 aa18.53■□□□□ 0.56
SSH3-207ENST00000531495 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
SSH3-207ENST00000531495 GPBP1L1Q9HC44 474 aaPredicted RBP18.52■□□□□ 0.56
SSH3-207ENST00000531495 MEGF6O75095 1541 aa18.52■□□□□ 0.56
SSH3-207ENST00000531495 QSER1Q2KHR3 1735 aa18.52■□□□□ 0.55
SSH3-207ENST00000531495 HSP90AB2PQ58FF8 381 aa18.51■□□□□ 0.55
SSH3-207ENST00000531495 PALLDQ8WX93 1383 aa18.51■□□□□ 0.55
SSH3-207ENST00000531495 INSRP06213 1382 aa18.49■□□□□ 0.55
SSH3-207ENST00000531495 IFFO2Q5TF58 517 aa18.48■□□□□ 0.55
SSH3-207ENST00000531495 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
SSH3-207ENST00000531495 FLT4P35916 1363 aa18.47■□□□□ 0.55
SSH3-207ENST00000531495 KIF24Q5T7B8 1368 aa18.47■□□□□ 0.55
SSH3-207ENST00000531495 LY75O60449 1722 aa18.46■□□□□ 0.55
SSH3-207ENST00000531495 DOT1LQ8TEK3 1739 aa18.46■□□□□ 0.55
SSH3-207ENST00000531495 CYP27B1O15528 508 aa18.46■□□□□ 0.55
SSH3-207ENST00000531495 PHF14O94880 888 aa18.46■□□□□ 0.55
SSH3-207ENST00000531495 ATP10DQ9P241 1426 aa18.46■□□□□ 0.55
SSH3-207ENST00000531495 COL24A1Q17RW2 1714 aa18.46■□□□□ 0.55
SSH3-207ENST00000531495 NSD3Q9BZ95 1437 aa18.45■□□□□ 0.54
SSH3-207ENST00000531495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.44■□□□□ 0.54
SSH3-207ENST00000531495 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
SSH3-207ENST00000531495 ZNF526Q8TF50 670 aaPredicted RBP18.44■□□□□ 0.54
SSH3-207ENST00000531495 PIGBQ92521 554 aa18.44■□□□□ 0.54
SSH3-207ENST00000531495 SSFA2P28290 1259 aa18.43■□□□□ 0.54
SSH3-207ENST00000531495 LOC102724428A0A0B4J2F2 783 aa18.42■□□□□ 0.54
SSH3-207ENST00000531495 SIK1P57059 783 aa18.42■□□□□ 0.54
SSH3-207ENST00000531495 NKX1-1Q15270 411 aaPredicted RBP18.42■□□□□ 0.54
SSH3-207ENST00000531495 TMOD3Q9NYL9 352 aa18.42■□□□□ 0.54
SSH3-207ENST00000531495 IGSF1Q8N6C5 1336 aa18.42■□□□□ 0.54
SSH3-207ENST00000531495 HSPA6P17066 643 aa18.41■□□□□ 0.54
SSH3-207ENST00000531495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.41■□□□□ 0.54
SSH3-207ENST00000531495 TUBGCP6Q96RT7 1819 aa18.4■□□□□ 0.54
SSH3-207ENST00000531495 ATP6V1AP38606 617 aa18.4■□□□□ 0.54
SSH3-207ENST00000531495 EMILIN1Q9Y6C2 1016 aa18.4■□□□□ 0.54
SSH3-207ENST00000531495 SHANK3Q9BYB0 1731 aa18.4■□□□□ 0.54
SSH3-207ENST00000531495 IFNL2Q8IZJ0 200 aa18.39■□□□□ 0.53
SSH3-207ENST00000531495 WWC3Q9ULE0 1092 aa18.39■□□□□ 0.53
SSH3-207ENST00000531495 RGPD2P0DJD1 1756 aa18.39■□□□□ 0.53
SSH3-207ENST00000531495 GNPATO15228 680 aa18.38■□□□□ 0.53
SSH3-207ENST00000531495 LINC00116Q8NCU8 138 aa18.37■□□□□ 0.53
SSH3-207ENST00000531495 WASHC2AQ641Q2 1341 aa18.37■□□□□ 0.53
SSH3-207ENST00000531495 GOLGB1Q14789 3259 aaKnown RBP18.36■□□□□ 0.53
SSH3-207ENST00000531495 TRAPPC3LQ5T215 181 aa18.36■□□□□ 0.53
SSH3-207ENST00000531495 SMIM5Q71RC9 77 aa18.36■□□□□ 0.53
SSH3-207ENST00000531495 EYA1Q99502 592 aa18.36■□□□□ 0.53
SSH3-207ENST00000531495 CARD14Q9BXL6 1004 aa18.36■□□□□ 0.53
SSH3-207ENST00000531495 ASAP1Q9ULH1 1129 aa18.36■□□□□ 0.53
SSH3-207ENST00000531495 C5P01031 1676 aa18.35■□□□□ 0.53
SSH3-207ENST00000531495 AMIGO3Q86WK7 504 aa18.35■□□□□ 0.53
SSH3-207ENST00000531495 NLGN1Q8N2Q7 840 aa18.35■□□□□ 0.53
SSH3-207ENST00000531495 RTCBQ9Y3I0 505 aaKnown RBP18.35■□□□□ 0.53
SSH3-207ENST00000531495 ADCY9O60503 1353 aa18.34■□□□□ 0.53
SSH3-207ENST00000531495 MMP10P09238 476 aa18.34■□□□□ 0.53
SSH3-207ENST00000531495 PHKG2P15735 406 aa18.34■□□□□ 0.53
SSH3-207ENST00000531495 TGFB2P61812 414 aa18.34■□□□□ 0.53
SSH3-207ENST00000531495 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
SSH3-207ENST00000531495 HSP90AB1P08238 724 aaKnown RBP18.32■□□□□ 0.52
SSH3-207ENST00000531495 ITPK1Q13572 414 aa18.32■□□□□ 0.52
SSH3-207ENST00000531495 ATG3Q9NT62 314 aa18.32■□□□□ 0.52
SSH3-207ENST00000531495 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
SSH3-207ENST00000531495 CCDC87Q9NVE4 849 aa18.31■□□□□ 0.52
SSH3-207ENST00000531495 BCS1LQ9Y276 419 aa18.31■□□□□ 0.52
SSH3-207ENST00000531495 ERVV-2B6SEH9 535 aa18.3■□□□□ 0.52
SSH3-207ENST00000531495 ADRA2BP18089 450 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms