RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-209ENST00000531474 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
NXF1-209ENST00000531474 NCAPD2Q15021 1401 aa12.5□□□□□ -0.41
NXF1-209ENST00000531474 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
NXF1-209ENST00000531474 THSD7AQ9UPZ6 1657 aa12.49□□□□□ -0.41
NXF1-209ENST00000531474 MEGF6O75095 1541 aa12.49□□□□□ -0.41
NXF1-209ENST00000531474 HMOX1P09601 288 aa12.49□□□□□ -0.41
NXF1-209ENST00000531474 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
NXF1-209ENST00000531474 TATP17735 454 aaPredicted RBP12.49□□□□□ -0.41
NXF1-209ENST00000531474 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
NXF1-209ENST00000531474 PDE3BQ13370 1112 aa12.49□□□□□ -0.41
NXF1-209ENST00000531474 ONECUT3O60422 494 aaPredicted RBP12.48□□□□□ -0.41
NXF1-209ENST00000531474 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
NXF1-209ENST00000531474 OVOS2A0A0G2JMS6 1433 aa12.47□□□□□ -0.41
NXF1-209ENST00000531474 DDB1Q16531 1140 aa12.47□□□□□ -0.41
NXF1-209ENST00000531474 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
NXF1-209ENST00000531474 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
NXF1-209ENST00000531474 TNS2Q63HR2 1409 aa12.46□□□□□ -0.41
NXF1-209ENST00000531474 KDRP35968 1356 aa12.46□□□□□ -0.41
NXF1-209ENST00000531474 FKBP8Q14318 412 aa12.46□□□□□ -0.41
NXF1-209ENST00000531474 WDR43Q15061 677 aaKnown RBP eCLIP12.46□□□□□ -0.41
NXF1-209ENST00000531474 PARP4Q9UKK3 1724 aaKnown RBP12.45□□□□□ -0.42
NXF1-209ENST00000531474 EXOC5O00471 708 aa12.45□□□□□ -0.42
NXF1-209ENST00000531474 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
NXF1-209ENST00000531474 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
NXF1-209ENST00000531474 KRT27Q7Z3Y8 459 aa12.44□□□□□ -0.42
NXF1-209ENST00000531474 ZCRB1Q8TBF4 217 aaKnown RBP12.44□□□□□ -0.42
NXF1-209ENST00000531474 DDX54Q8TDD1 881 aaKnown RBP12.44□□□□□ -0.42
NXF1-209ENST00000531474 PLEKHO1Q53GL0 409 aaPredicted RBP12.43□□□□□ -0.42
NXF1-209ENST00000531474 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
NXF1-209ENST00000531474 SPG7Q9UQ90 795 aa12.43□□□□□ -0.42
NXF1-209ENST00000531474 FCHSD2O94868 740 aa12.42□□□□□ -0.42
NXF1-209ENST00000531474 FAM182BQ5T319 152 aa12.42□□□□□ -0.42
NXF1-209ENST00000531474 ILDR2Q71H61 639 aa12.42□□□□□ -0.42
NXF1-209ENST00000531474 PLEKHG2Q9H7P9 1386 aa12.42□□□□□ -0.42
NXF1-209ENST00000531474 PCDH11XQ9BZA7 1347 aa12.41□□□□□ -0.42
NXF1-209ENST00000531474 PCDH11YQ9BZA8 1340 aa12.41□□□□□ -0.42
NXF1-209ENST00000531474 AMOTQ4VCS5 1084 aa12.41□□□□□ -0.42
NXF1-209ENST00000531474 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
NXF1-209ENST00000531474 PKD1L3Q7Z443 1732 aa12.41□□□□□ -0.42
NXF1-209ENST00000531474 MARCH10Q8NA82 808 aaPredicted RBP12.41□□□□□ -0.42
NXF1-209ENST00000531474 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.422e-9■■□□□ 12.5
NXF1-209ENST00000531474 ADAMTS8Q9UP79 889 aa12.41□□□□□ -0.42
NXF1-209ENST00000531474 MAPK8IP3Q9UPT6 1336 aa12.4□□□□□ -0.42
NXF1-209ENST00000531474 BRWD3Q6RI45 1802 aa12.4□□□□□ -0.42
NXF1-209ENST00000531474 NEFMP07197 916 aa12.4□□□□□ -0.42
NXF1-209ENST00000531474 CYP27B1O15528 508 aa12.39□□□□□ -0.43
NXF1-209ENST00000531474 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
NXF1-209ENST00000531474 CCDC146Q8IYE0 955 aa12.39□□□□□ -0.43
NXF1-209ENST00000531474 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
NXF1-209ENST00000531474 PNNQ9H307 717 aaKnown RBP12.39□□□□□ -0.43
NXF1-209ENST00000531474 SHANK3Q9BYB0 1731 aa12.38□□□□□ -0.43
NXF1-209ENST00000531474 PHKG2P15735 406 aa12.38□□□□□ -0.43
NXF1-209ENST00000531474 C1orf141Q5JVX7 400 aa12.38□□□□□ -0.43
NXF1-209ENST00000531474 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
NXF1-209ENST00000531474 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
NXF1-209ENST00000531474 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
NXF1-209ENST00000531474 FAM196AQ6ZSG2 479 aa12.37□□□□□ -0.43
NXF1-209ENST00000531474 RUNDC1Q96C34 613 aa12.37□□□□□ -0.43
NXF1-209ENST00000531474 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
NXF1-209ENST00000531474 MAP3K5Q99683 1374 aa12.35□□□□□ -0.43
NXF1-209ENST00000531474 HSP90AB1P08238 724 aaKnown RBP12.35□□□□□ -0.43
NXF1-209ENST00000531474 AKAP4Q5JQC9 854 aa12.35□□□□□ -0.43
NXF1-209ENST00000531474 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
NXF1-209ENST00000531474 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
NXF1-209ENST00000531474 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
NXF1-209ENST00000531474 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
NXF1-209ENST00000531474 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
NXF1-209ENST00000531474 BCL9O00512 1426 aa12.34□□□□□ -0.43
NXF1-209ENST00000531474 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
NXF1-209ENST00000531474 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
NXF1-209ENST00000531474 TRIM37O94972 964 aa12.33□□□□□ -0.44
NXF1-209ENST00000531474 DCAF5Q96JK2 942 aa12.33□□□□□ -0.44
NXF1-209ENST00000531474 PPP4R2Q9NY27 417 aa12.33□□□□□ -0.44
NXF1-209ENST00000531474 RRP7AQ9Y3A4 280 aaKnown RBP12.33□□□□□ -0.44
NXF1-209ENST00000531474 KDM6AO15550 1401 aaPredicted RBP12.33□□□□□ -0.44
NXF1-209ENST00000531474 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
NXF1-209ENST00000531474 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
NXF1-209ENST00000531474 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
NXF1-209ENST00000531474 SENP3-EIF4A1A0A087X0R7 540 aa12.31□□□□□ -0.44
NXF1-209ENST00000531474 APAF1O14727 1248 aa12.31□□□□□ -0.44
NXF1-209ENST00000531474 KCNQ2O43526 872 aa12.31□□□□□ -0.44
NXF1-209ENST00000531474 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
NXF1-209ENST00000531474 RIPK4P57078 832 aa12.31□□□□□ -0.44
NXF1-209ENST00000531474 RTF1Q92541 710 aaKnown RBP12.31□□□□□ -0.44
NXF1-209ENST00000531474 NHSQ6T4R5 1651 aa12.31□□□□□ -0.44
NXF1-209ENST00000531474 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
NXF1-209ENST00000531474 RNMTO43148 476 aaKnown RBP12.3□□□□□ -0.44
NXF1-209ENST00000531474 CABP4P57796 275 aa12.3□□□□□ -0.44
NXF1-209ENST00000531474 MCM10Q7L590 875 aa12.3□□□□□ -0.44
NXF1-209ENST00000531474 PTF1AQ7RTS3 328 aa12.3□□□□□ -0.44
NXF1-209ENST00000531474 BCL11BQ9C0K0 894 aaPredicted RBP12.3□□□□□ -0.44
NXF1-209ENST00000531474 LGR6Q9HBX8 967 aa12.3□□□□□ -0.44
NXF1-209ENST00000531474 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
NXF1-209ENST00000531474 ERVV-2B6SEH9 535 aa12.29□□□□□ -0.44
NXF1-209ENST00000531474 HTATSF1O43719 755 aaKnown RBP12.29□□□□□ -0.44
NXF1-209ENST00000531474 LMOD3Q0VAK6 560 aa12.29□□□□□ -0.44
NXF1-209ENST00000531474 SF3B2Q13435 895 aaKnown RBP12.29□□□□□ -0.44
NXF1-209ENST00000531474 DCTN1Q14203 1278 aa12.29□□□□□ -0.44
NXF1-209ENST00000531474 IL17REQ8NFR9 667 aa12.29□□□□□ -0.44
NXF1-209ENST00000531474 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms