RNA–Protein interactions for RNA: ENST00000530773.5

VPS51-209, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 837 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-209ENST00000530773 ANKRD24Q8TF21 1146 aa25.7■■□□□ 1.7
VPS51-209ENST00000530773 LTN1O94822 1766 aa25.69■■□□□ 1.7
VPS51-209ENST00000530773 FAM9BQ8IZU0 186 aa25.69■■□□□ 1.7
VPS51-209ENST00000530773 LTV1Q96GA3 475 aaPredicted RBP25.69■■□□□ 1.7
VPS51-209ENST00000530773 COL3A1P02461 1466 aaPredicted RBP25.68■■□□□ 1.7
VPS51-209ENST00000530773 NLRP2Q9NX02 1062 aa25.67■■□□□ 1.7
VPS51-209ENST00000530773 FCHSD2O94868 740 aa25.66■■□□□ 1.7
VPS51-209ENST00000530773 NEFMP07197 916 aa25.66■■□□□ 1.7
VPS51-209ENST00000530773 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
VPS51-209ENST00000530773 PARP4Q9UKK3 1724 aaKnown RBP25.66■■□□□ 1.7
VPS51-209ENST00000530773 ERBB3P21860 1342 aa25.65■■□□□ 1.7
VPS51-209ENST00000530773 BCL11BQ9C0K0 894 aaPredicted RBP25.65■■□□□ 1.7
VPS51-209ENST00000530773 ADAMTS8Q9UP79 889 aa25.65■■□□□ 1.7
VPS51-209ENST00000530773 COL18A1P39060 1754 aa25.64■■□□□ 1.7
VPS51-209ENST00000530773 TNS1Q9HBL0 1735 aaKnown RBP25.63■■□□□ 1.69
VPS51-209ENST00000530773 PLSCR1O15162 318 aa25.63■■□□□ 1.69
VPS51-209ENST00000530773 MARCH10Q8NA82 808 aaPredicted RBP25.62■■□□□ 1.69
VPS51-209ENST00000530773 EYA1Q99502 592 aa25.62■■□□□ 1.69
VPS51-209ENST00000530773 IGSF1Q8N6C5 1336 aa25.61■■□□□ 1.69
VPS51-209ENST00000530773 IL2RBP14784 551 aa25.59■■□□□ 1.69
VPS51-209ENST00000530773 SULT6B1Q6IMI4 303 aa25.59■■□□□ 1.69
VPS51-209ENST00000530773 NBPF6Q5VWK0 638 aa25.58■■□□□ 1.69
VPS51-209ENST00000530773 NBPF4Q96M43 638 aa25.58■■□□□ 1.69
VPS51-209ENST00000530773 RUNDC1Q96C34 613 aa25.57■■□□□ 1.68
VPS51-209ENST00000530773 BCL9O00512 1426 aa25.56■■□□□ 1.68
VPS51-209ENST00000530773 HMOX1P09601 288 aa25.55■■□□□ 1.68
VPS51-209ENST00000530773 MAPK8IP3Q9UPT6 1336 aa25.55■■□□□ 1.68
VPS51-209ENST00000530773 RSPH6AQ9H0K4 717 aa25.54■■□□□ 1.68
VPS51-209ENST00000530773 KDRP35968 1356 aa25.54■■□□□ 1.68
VPS51-209ENST00000530773 LRRC37A3O60309 1634 aa25.53■■□□□ 1.68
VPS51-209ENST00000530773 LRP5O75197 1615 aa25.53■■□□□ 1.68
VPS51-209ENST00000530773 NGEFQ8N5V2 710 aa25.53■■□□□ 1.68
VPS51-209ENST00000530773 RAPGEF4Q8WZA2 1011 aa25.53■■□□□ 1.68
VPS51-209ENST00000530773 RGPD5Q99666 1765 aa25.53■■□□□ 1.68
VPS51-209ENST00000530773 FAM208AQ9UK61 1670 aaKnown RBP25.52■■□□□ 1.68
VPS51-209ENST00000530773 PRKAR2BP31323 418 aa25.51■■□□□ 1.67
VPS51-209ENST00000530773 PLEKHG2Q9H7P9 1386 aa25.5■■□□□ 1.67
VPS51-209ENST00000530773 TNS2Q63HR2 1409 aa25.49■■□□□ 1.67
VPS51-209ENST00000530773 TATP17735 454 aaPredicted RBP25.49■■□□□ 1.67
VPS51-209ENST00000530773 PLEKHF1Q96S99 279 aa25.49■■□□□ 1.67
VPS51-209ENST00000530773 AMOTQ4VCS5 1084 aa25.48■■□□□ 1.67
VPS51-209ENST00000530773 AEBP1Q8IUX7 1158 aa25.48■■□□□ 1.67
VPS51-209ENST00000530773 USHBP1Q8N6Y0 703 aa25.48■■□□□ 1.67
VPS51-209ENST00000530773 SPON1Q9HCB6 807 aa25.48■■□□□ 1.67
VPS51-209ENST00000530773 NCAPD2Q15021 1401 aa25.47■■□□□ 1.67
VPS51-209ENST00000530773 NCBP3Q53F19 620 aaKnown RBP25.47■■□□□ 1.67
VPS51-209ENST00000530773 PLEKHO1Q53GL0 409 aaPredicted RBP25.47■■□□□ 1.67
VPS51-209ENST00000530773 CCDC146Q8IYE0 955 aa25.47■■□□□ 1.67
VPS51-209ENST00000530773 PTF1AQ7RTS3 328 aa25.46■■□□□ 1.67
VPS51-209ENST00000530773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.46■■□□□ 1.67
VPS51-209ENST00000530773 PPP1R1BQ9UD71 204 aaPredicted RBP25.46■■□□□ 1.67
VPS51-209ENST00000530773 ACSBG1Q96GR2 724 aa25.45■■□□□ 1.66
VPS51-209ENST00000530773 KCNQ2O43526 872 aa25.44■■□□□ 1.66
VPS51-209ENST00000530773 TXNRD1Q16881 649 aa25.44■■□□□ 1.66
VPS51-209ENST00000530773 GAS2L2Q8NHY3 880 aa25.44■■□□□ 1.66
VPS51-209ENST00000530773 DDX54Q8TDD1 881 aaKnown RBP25.44■■□□□ 1.66
VPS51-209ENST00000530773 STK32BQ9NY57 414 aa25.44■■□□□ 1.66
VPS51-209ENST00000530773 SPG7Q9UQ90 795 aa25.44■■□□□ 1.66
VPS51-209ENST00000530773 RREB1Q92766 1687 aa25.44■■□□□ 1.66
VPS51-209ENST00000530773 WNK3Q9BYP7 1800 aa25.43■■□□□ 1.66
VPS51-209ENST00000530773 APAF1O14727 1248 aa25.43■■□□□ 1.66
VPS51-209ENST00000530773 HNRNPUQ00839 825 aaKnown RBP eCLIP25.42■■□□□ 1.66
VPS51-209ENST00000530773 PROM2Q8N271 834 aa25.41■■□□□ 1.66
VPS51-209ENST00000530773 SBF2Q86WG5 1849 aa25.41■■□□□ 1.66
VPS51-209ENST00000530773 NUP188Q5SRE5 1749 aa25.4■■□□□ 1.66
VPS51-209ENST00000530773 LMOD3Q0VAK6 560 aa25.4■■□□□ 1.66
VPS51-209ENST00000530773 NFE2L2Q16236 605 aa25.4■■□□□ 1.66
VPS51-209ENST00000530773 PHACTR3Q96KR7 559 aa25.4■■□□□ 1.66
VPS51-209ENST00000530773 DCAF8L1A6NGE4 600 aa25.39■■□□□ 1.66
VPS51-209ENST00000530773 TMPOP42166 694 aaKnown RBP25.39■■□□□ 1.66
VPS51-209ENST00000530773 RGPD3A6NKT7 1758 aaPredicted RBP25.39■■□□□ 1.65
VPS51-209ENST00000530773 RGPD4Q7Z3J3 1758 aa25.39■■□□□ 1.65
VPS51-209ENST00000530773 ZCRB1Q8TBF4 217 aaKnown RBP25.38■■□□□ 1.65
VPS51-209ENST00000530773 RIPK4P57078 832 aa25.37■■□□□ 1.65
VPS51-209ENST00000530773 HTATSF1O43719 755 aaKnown RBP25.36■■□□□ 1.65
VPS51-209ENST00000530773 SLC15A2Q16348 729 aa25.36■■□□□ 1.65
VPS51-209ENST00000530773 MTHFSDQ2M296 383 aaKnown RBP25.36■■□□□ 1.65
VPS51-209ENST00000530773 C1orf141Q5JVX7 400 aa25.36■■□□□ 1.65
VPS51-209ENST00000530773 ANO8Q9HCE9 1232 aaPredicted RBP25.36■■□□□ 1.65
VPS51-209ENST00000530773 CCDC27Q2M243 656 aa25.35■■□□□ 1.65
VPS51-209ENST00000530773 YTHDC1Q96MU7 727 aaKnown RBP25.35■■□□□ 1.65
VPS51-209ENST00000530773 RGPD2P0DJD1 1756 aa25.34■■□□□ 1.65
VPS51-209ENST00000530773 NEUROD2Q15784 382 aa25.34■■□□□ 1.65
VPS51-209ENST00000530773 RTF1Q92541 710 aaKnown RBP25.34■■□□□ 1.65
VPS51-209ENST00000530773 SYTL4Q96C24 671 aaPredicted RBP25.34■■□□□ 1.65
VPS51-209ENST00000530773 AKAP4Q5JQC9 854 aa25.33■■□□□ 1.65
VPS51-209ENST00000530773 ZNF530Q6P9A1 599 aaPredicted RBP25.33■■□□□ 1.65
VPS51-209ENST00000530773 GNAT3A8MTJ3 354 aa25.32■■□□□ 1.64
VPS51-209ENST00000530773 HSP90AB1P08238 724 aaKnown RBP25.32■■□□□ 1.64
VPS51-209ENST00000530773 CALD1Q05682 793 aaKnown RBP25.32■■□□□ 1.64
VPS51-209ENST00000530773 IFNL2Q8IZJ0 200 aa25.32■■□□□ 1.64
VPS51-209ENST00000530773 RRP7AQ9Y3A4 280 aaKnown RBP25.31■■□□□ 1.64
VPS51-209ENST00000530773 PCDH11XQ9BZA7 1347 aa25.31■■□□□ 1.64
VPS51-209ENST00000530773 PCDH11YQ9BZA8 1340 aa25.31■■□□□ 1.64
VPS51-209ENST00000530773 KAT6BQ8WYB5 2073 aa25.3■■□□□ 1.64
VPS51-209ENST00000530773 SLC27A3Q5K4L6 730 aa25.3■■□□□ 1.64
VPS51-209ENST00000530773 MEGF6O75095 1541 aa25.3■■□□□ 1.64
VPS51-209ENST00000530773 ZBED9Q6R2W3 1325 aa25.3■■□□□ 1.64
VPS51-209ENST00000530773 PRIM1P49642 420 aaKnown RBP25.29■■□□□ 1.64
VPS51-209ENST00000530773 SALL2Q9Y467 1007 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms