RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 KRT27Q7Z3Y8 459 aa14.74□□□□□ -0.05
CAPN1-218ENST00000530442 RAPGEF4Q8WZA2 1011 aa14.74□□□□□ -0.05
CAPN1-218ENST00000530442 TNS1Q9HBL0 1735 aaKnown RBP14.74□□□□□ -0.05
CAPN1-218ENST00000530442 VIRMAQ69YN4 1812 aaKnown RBP14.73□□□□□ -0.05
CAPN1-218ENST00000530442 U2SURPO15042 1029 aaKnown RBP14.73□□□□□ -0.05
CAPN1-218ENST00000530442 TATP17735 454 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-218ENST00000530442 NHSQ6T4R5 1651 aa14.72□□□□□ -0.05
CAPN1-218ENST00000530442 HMOX1P09601 288 aa14.72□□□□□ -0.05
CAPN1-218ENST00000530442 EXOC5O00471 708 aa14.71□□□□□ -0.05
CAPN1-218ENST00000530442 PDE3BQ13370 1112 aa14.71□□□□□ -0.05
CAPN1-218ENST00000530442 FAM182BQ5T319 152 aa14.71□□□□□ -0.05
CAPN1-218ENST00000530442 MARCH10Q8NA82 808 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-218ENST00000530442 BCL9O00512 1426 aa14.7□□□□□ -0.06
CAPN1-218ENST00000530442 CCDC184Q52MB2 194 aa14.7□□□□□ -0.06
CAPN1-218ENST00000530442 NUDCQ9Y266 331 aa14.7□□□□□ -0.06
CAPN1-218ENST00000530442 PCDH11XQ9BZA7 1347 aa14.69□□□□□ -0.06
CAPN1-218ENST00000530442 PCDH11YQ9BZA8 1340 aa14.69□□□□□ -0.06
CAPN1-218ENST00000530442 U2AF1L5P0DN76 240 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-218ENST00000530442 U2AF1Q01081 240 aaKnown RBP eCLIP14.69□□□□□ -0.06
CAPN1-218ENST00000530442 ZCRB1Q8TBF4 217 aaKnown RBP14.69□□□□□ -0.06
CAPN1-218ENST00000530442 RSPH6AQ9H0K4 717 aa14.69□□□□□ -0.06
CAPN1-218ENST00000530442 ADAMTS7Q9UKP4 1686 aa14.68□□□□□ -0.06
CAPN1-218ENST00000530442 DIEXFQ68CQ4 756 aaKnown RBP14.68□□□□□ -0.06
CAPN1-218ENST00000530442 ITGB4P16144 1822 aa14.68□□□□□ -0.06
CAPN1-218ENST00000530442 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
CAPN1-218ENST00000530442 SCN11AQ9UI33 1791 aa14.68□□□□□ -0.06
CAPN1-218ENST00000530442 CYP27B1O15528 508 aa14.67□□□□□ -0.06
CAPN1-218ENST00000530442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■□□□ 11.9
CAPN1-218ENST00000530442 PRKAR2BP31323 418 aa14.66□□□□□ -0.06
CAPN1-218ENST00000530442 DDX54Q8TDD1 881 aaKnown RBP14.66□□□□□ -0.06
CAPN1-218ENST00000530442 SPG7Q9UQ90 795 aa14.66□□□□□ -0.06
CAPN1-218ENST00000530442 BTAF1O14981 1849 aa14.66□□□□□ -0.06
CAPN1-218ENST00000530442 FCHSD2O94868 740 aa14.64□□□□□ -0.07
CAPN1-218ENST00000530442 PHKG2P15735 406 aa14.64□□□□□ -0.07
CAPN1-218ENST00000530442 AMOTQ4VCS5 1084 aa14.64□□□□□ -0.07
CAPN1-218ENST00000530442 PLEKHO1Q53GL0 409 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-218ENST00000530442 FAM196AQ6ZSG2 479 aa14.64□□□□□ -0.07
CAPN1-218ENST00000530442 RGPD3A6NKT7 1758 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-218ENST00000530442 RGPD4Q7Z3J3 1758 aa14.64□□□□□ -0.07
CAPN1-218ENST00000530442 KDM6AO15550 1401 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-218ENST00000530442 KAT6BQ8WYB5 2073 aa14.63□□□□□ -0.07
CAPN1-218ENST00000530442 ZNF530Q6P9A1 599 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-218ENST00000530442 PHACTR3Q96KR7 559 aa14.63□□□□□ -0.07
CAPN1-218ENST00000530442 MRS2Q9HD23 443 aa14.63□□□□□ -0.07
CAPN1-218ENST00000530442 WDR43Q15061 677 aaKnown RBP eCLIP14.62□□□□□ -0.07
CAPN1-218ENST00000530442 MTHFSDQ2M296 383 aaKnown RBP14.62□□□□□ -0.07
CAPN1-218ENST00000530442 IFNL2Q8IZJ0 200 aa14.62□□□□□ -0.07
CAPN1-218ENST00000530442 PLEKHF1Q96S99 279 aa14.62□□□□□ -0.07
CAPN1-218ENST00000530442 SIPA1L3O60292 1781 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-218ENST00000530442 MRC1P22897 1456 aa14.62□□□□□ -0.07
CAPN1-218ENST00000530442 NKX1-1Q15270 411 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-218ENST00000530442 UPF1Q92900 1129 aaKnown RBP eCLIP14.61□□□□□ -0.07
CAPN1-218ENST00000530442 PTF1AQ7RTS3 328 aa14.6□□□□□ -0.07
CAPN1-218ENST00000530442 ACSBG1Q96GR2 724 aa14.6□□□□□ -0.07
CAPN1-218ENST00000530442 ADAMTS8Q9UP79 889 aa14.6□□□□□ -0.07
CAPN1-218ENST00000530442 RREB1Q92766 1687 aa14.6□□□□□ -0.07
CAPN1-218ENST00000530442 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
CAPN1-218ENST00000530442 PAPPAQ13219 1627 aa14.59□□□□□ -0.07
CAPN1-218ENST00000530442 LY75O60449 1722 aa14.59□□□□□ -0.07
CAPN1-218ENST00000530442 TRIM37O94972 964 aa14.59□□□□□ -0.07
CAPN1-218ENST00000530442 AKAP4Q5JQC9 854 aa14.59□□□□□ -0.07
CAPN1-218ENST00000530442 C1orf141Q5JVX7 400 aa14.59□□□□□ -0.07
CAPN1-218ENST00000530442 GAS2L2Q8NHY3 880 aa14.59□□□□□ -0.07
CAPN1-218ENST00000530442 PNISRQ8TF01 805 aaKnown RBP14.59□□□□□ -0.07
CAPN1-218ENST00000530442 SOCS7O14512 581 aa14.58□□□□□ -0.08
CAPN1-218ENST00000530442 KCNQ2O43526 872 aa14.58□□□□□ -0.08
CAPN1-218ENST00000530442 CCDC146Q8IYE0 955 aa14.58□□□□□ -0.08
CAPN1-218ENST00000530442 CCER2I3L3R5 266 aa14.57□□□□□ -0.08
CAPN1-218ENST00000530442 MIER1Q8N108 512 aa14.57□□□□□ -0.08
CAPN1-218ENST00000530442 MAPK8IP3Q9UPT6 1336 aa14.57□□□□□ -0.08
CAPN1-218ENST00000530442 NUP188Q5SRE5 1749 aa14.57□□□□□ -0.08
CAPN1-218ENST00000530442 HSP90AB1P08238 724 aaKnown RBP14.56□□□□□ -0.08
CAPN1-218ENST00000530442 MPRIPQ6WCQ1 1025 aa14.56□□□□□ -0.08
CAPN1-218ENST00000530442 DCAF5Q96JK2 942 aa14.56□□□□□ -0.08
CAPN1-218ENST00000530442 BCL11BQ9C0K0 894 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-218ENST00000530442 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
CAPN1-218ENST00000530442 PRIM1P49642 420 aaKnown RBP14.55□□□□□ -0.08
CAPN1-218ENST00000530442 SYTL4Q96C24 671 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-218ENST00000530442 RUNDC1Q96C34 613 aa14.55□□□□□ -0.08
CAPN1-218ENST00000530442 UBR2Q8IWV8 1755 aa14.55□□□□□ -0.08
CAPN1-218ENST00000530442 GNAT3A8MTJ3 354 aa14.54□□□□□ -0.08
CAPN1-218ENST00000530442 NEFMP07197 916 aa14.54□□□□□ -0.08
CAPN1-218ENST00000530442 NFE2L2Q16236 605 aa14.54□□□□□ -0.08
CAPN1-218ENST00000530442 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
CAPN1-218ENST00000530442 CEMIPQ8WUJ3 1361 aa14.54□□□□□ -0.08
CAPN1-218ENST00000530442 RNMTO43148 476 aaKnown RBP14.53□□□□□ -0.08
CAPN1-218ENST00000530442 DEFB132Q7Z7B7 95 aa14.53□□□□□ -0.08
CAPN1-218ENST00000530442 LGR6Q9HBX8 967 aa14.53□□□□□ -0.08
CAPN1-218ENST00000530442 KDM3BQ7LBC6 1761 aa14.52□□□□□ -0.08
CAPN1-218ENST00000530442 ERVV-2B6SEH9 535 aa14.52□□□□□ -0.09
CAPN1-218ENST00000530442 APBA3O96018 575 aa14.52□□□□□ -0.09
CAPN1-218ENST00000530442 SF3B2Q13435 895 aaKnown RBP14.52□□□□□ -0.09
CAPN1-218ENST00000530442 TAF1LQ8IZX4 1826 aa14.51□□□□□ -0.09
CAPN1-218ENST00000530442 TMPOP42166 694 aaKnown RBP14.51□□□□□ -0.09
CAPN1-218ENST00000530442 BAG6P46379 1132 aa14.51□□□□□ -0.09
CAPN1-218ENST00000530442 FAM9BQ8IZU0 186 aa14.51□□□□□ -0.09
CAPN1-218ENST00000530442 IL17REQ8NFR9 667 aa14.51□□□□□ -0.09
CAPN1-218ENST00000530442 PIGBQ92521 554 aa14.51□□□□□ -0.09
CAPN1-218ENST00000530442 TMOD3Q9NYL9 352 aa14.51□□□□□ -0.09
CAPN1-218ENST00000530442 RRP7AQ9Y3A4 280 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms