RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 IL21Q9HBE4 155 aa10.44□□□□□ -0.74
CAPRIN1-208ENST00000530008 PCDH10Q9P2E7 1040 aa10.44□□□□□ -0.74
CAPRIN1-208ENST00000530008 ZNF16P17020 682 aaPredicted RBP10.43□□□□□ -0.74
CAPRIN1-208ENST00000530008 ZNF211Q13398 564 aaPredicted RBP10.43□□□□□ -0.74
CAPRIN1-208ENST00000530008 TJAP1Q5JTD0 557 aa10.43□□□□□ -0.74
CAPRIN1-208ENST00000530008 CCDC125Q86Z20 511 aa10.43□□□□□ -0.74
CAPRIN1-208ENST00000530008 SEPT12Q8IYM1 358 aa10.43□□□□□ -0.74
CAPRIN1-208ENST00000530008 HINFPQ9BQA5 517 aa10.43□□□□□ -0.74
CAPRIN1-208ENST00000530008 ANKRD33BA6NCL7 494 aa10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 H3BRB1 525 aa10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 ICMTO60725 284 aa10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 LGR5O75473 907 aa10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 TRMT44Q8IYL2 757 aaKnown RBP10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 MRRFQ96E11 262 aaKnown RBP10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 TUT1Q9H6E5 874 aaKnown RBP10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 ANO2Q9NQ90 1003 aa10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 KIAA1522Q9P206 1035 aaPredicted RBP10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 CDV3Q9UKY7 258 aaKnown RBP10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 FCF1Q9Y324 198 aaKnown RBP10.42□□□□□ -0.74
CAPRIN1-208ENST00000530008 S1PR4O95977 384 aa10.41□□□□□ -0.74
CAPRIN1-208ENST00000530008 NPAS4Q8IUM7 802 aa10.41□□□□□ -0.74
CAPRIN1-208ENST00000530008 GLYCTKQ8IVS8 523 aa10.41□□□□□ -0.74
CAPRIN1-208ENST00000530008 IGSF5Q9NSI5 407 aa10.41□□□□□ -0.74
CAPRIN1-208ENST00000530008 M0R2N6 131 aa10.4□□□□□ -0.74
CAPRIN1-208ENST00000530008 WEE1P30291 646 aa10.4□□□□□ -0.74
CAPRIN1-208ENST00000530008 SH3BP2P78314 561 aa10.39□□□□□ -0.75
CAPRIN1-208ENST00000530008 TSEN2Q8NCE0 465 aaKnown RBP10.39□□□□□ -0.75
CAPRIN1-208ENST00000530008 GIPC2Q8TF65 315 aa10.39□□□□□ -0.75
CAPRIN1-208ENST00000530008 GTF3C2Q8WUA4 911 aaPredicted RBP10.39□□□□□ -0.75
CAPRIN1-208ENST00000530008 SEPT3Q9UH03 358 aa10.39□□□□□ -0.75
CAPRIN1-208ENST00000530008 C21orf2O43822 256 aa10.38□□□□□ -0.75
CAPRIN1-208ENST00000530008 MYCP01106 439 aaPredicted RBP10.38□□□□□ -0.75
CAPRIN1-208ENST00000530008 MKNK1Q9BUB5 465 aa10.38□□□□□ -0.75
CAPRIN1-208ENST00000530008 RAB15P59190 212 aa10.37□□□□□ -0.75
CAPRIN1-208ENST00000530008 FKBP5Q13451 457 aaPredicted RBP10.37□□□□□ -0.75
CAPRIN1-208ENST00000530008 NKX2-3Q8TAU0 364 aa10.37□□□□□ -0.75
CAPRIN1-208ENST00000530008 KCTD15Q96SI1 283 aaPredicted RBP10.37□□□□□ -0.75
CAPRIN1-208ENST00000530008 DNMT3AQ9Y6K1 912 aaPredicted RBP10.37□□□□□ -0.75
CAPRIN1-208ENST00000530008 POTEMA6NI47 508 aa10.36□□□□□ -0.75
CAPRIN1-208ENST00000530008 PTCD1O75127 700 aaKnown RBP10.36□□□□□ -0.75
CAPRIN1-208ENST00000530008 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.36□□□□□ -0.75
CAPRIN1-208ENST00000530008 LOC105371045A0A1W2PR82 267 aa10.35□□□□□ -0.75
CAPRIN1-208ENST00000530008 MAPK1P28482 360 aa10.35□□□□□ -0.75
CAPRIN1-208ENST00000530008 FKBP4Q02790 459 aaKnown RBP eCLIP10.35□□□□□ -0.75
CAPRIN1-208ENST00000530008 SF3B2Q13435 895 aaKnown RBP10.35□□□□□ -0.75
CAPRIN1-208ENST00000530008 ECM1Q16610 540 aa10.35□□□□□ -0.75
CAPRIN1-208ENST00000530008 CAPN12Q6ZSI9 719 aa10.35□□□□□ -0.75
CAPRIN1-208ENST00000530008 PURBQ96QR8 312 aaKnown RBP10.35□□□□□ -0.75
CAPRIN1-208ENST00000530008 ZNF358Q9NW07 568 aa10.35□□□□□ -0.75
CAPRIN1-208ENST00000530008 SCTRP47872 440 aa10.34□□□□□ -0.75
CAPRIN1-208ENST00000530008 PTPN5P54829 565 aa10.34□□□□□ -0.75
CAPRIN1-208ENST00000530008 ZNF326Q5BKZ1 582 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-208ENST00000530008 DCTN4Q9UJW0 460 aa10.34□□□□□ -0.75
CAPRIN1-208ENST00000530008 INTS6LQ5JSJ4 861 aaKnown RBP10.33□□□□□ -0.76
CAPRIN1-208ENST00000530008 COL26A1Q96A83 441 aa10.33□□□□□ -0.76
CAPRIN1-208ENST00000530008 ASB16Q96NS5 453 aa10.33□□□□□ -0.76
CAPRIN1-208ENST00000530008 KRTAP3-3Q9BYR6 98 aa10.33□□□□□ -0.76
CAPRIN1-208ENST00000530008 KRTAP3-2Q9BYR7 98 aa10.33□□□□□ -0.76
CAPRIN1-208ENST00000530008 ERVH48-1M5A8F1 160 aa10.32□□□□□ -0.76
CAPRIN1-208ENST00000530008 ARHGAP4P98171 946 aa10.32□□□□□ -0.76
CAPRIN1-208ENST00000530008 MTMR3Q13615 1198 aa10.32□□□□□ -0.76
CAPRIN1-208ENST00000530008 MAP4K5Q9Y4K4 846 aa10.32□□□□□ -0.76
CAPRIN1-208ENST00000530008 TMEM229AB2RXF0 380 aa10.31□□□□□ -0.76
CAPRIN1-208ENST00000530008 IGFBP4P22692 258 aa10.31□□□□□ -0.76
CAPRIN1-208ENST00000530008 VASH1Q7L8A9 365 aaPredicted RBP10.31□□□□□ -0.76
CAPRIN1-208ENST00000530008 FBXO33Q7Z6M2 555 aa10.31□□□□□ -0.76
CAPRIN1-208ENST00000530008 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
CAPRIN1-208ENST00000530008 ESF1Q9H501 851 aaKnown RBP10.31□□□□□ -0.76
CAPRIN1-208ENST00000530008 VARSP26640 1264 aaKnown RBP10.3□□□□□ -0.76
CAPRIN1-208ENST00000530008 ERVK-9P63128 1117 aa10.3□□□□□ -0.76
CAPRIN1-208ENST00000530008 ZSCAN29Q8IWY8 852 aaPredicted RBP10.3□□□□□ -0.76
CAPRIN1-208ENST00000530008 HELQQ8TDG4 1101 aa10.3□□□□□ -0.76
CAPRIN1-208ENST00000530008 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
CAPRIN1-208ENST00000530008 ZBTB24O43167 697 aaPredicted RBP10.29□□□□□ -0.76
CAPRIN1-208ENST00000530008 FOXO3O43524 673 aa10.29□□□□□ -0.76
CAPRIN1-208ENST00000530008 SCNN1DP51172 638 aa10.29□□□□□ -0.76
CAPRIN1-208ENST00000530008 NAA30Q147X3 362 aaPredicted RBP10.29□□□□□ -0.76
CAPRIN1-208ENST00000530008 CC2D2BQ6DHV5 1058 aa10.29□□□□□ -0.76
CAPRIN1-208ENST00000530008 TRIM32Q13049 653 aa10.28□□□□□ -0.76
CAPRIN1-208ENST00000530008 BACH1O14867 736 aa10.27□□□□□ -0.77
CAPRIN1-208ENST00000530008 VAMP1P23763 118 aa10.27□□□□□ -0.77
CAPRIN1-208ENST00000530008 GDF10P55107 478 aa10.27□□□□□ -0.77
CAPRIN1-208ENST00000530008 TAGLNQ01995 201 aaKnown RBP10.27□□□□□ -0.77
CAPRIN1-208ENST00000530008 TNS4Q8IZW8 715 aa10.27□□□□□ -0.77
CAPRIN1-208ENST00000530008 SCG3Q8WXD2 468 aaKnown RBP10.27□□□□□ -0.77
CAPRIN1-208ENST00000530008 OSBPL3Q9H4L5 887 aa10.27□□□□□ -0.77
CAPRIN1-208ENST00000530008 WASLO00401 505 aaPredicted RBP10.26□□□□□ -0.77
CAPRIN1-208ENST00000530008 TCF3P15923 654 aa10.26□□□□□ -0.77
CAPRIN1-208ENST00000530008 NPR3P17342 541 aa10.26□□□□□ -0.77
CAPRIN1-208ENST00000530008 WNT7BP56706 349 aa10.26□□□□□ -0.77
CAPRIN1-208ENST00000530008 SKOR1P84550 965 aa10.26□□□□□ -0.77
CAPRIN1-208ENST00000530008 COL19A1Q14993 1142 aa10.26□□□□□ -0.77
CAPRIN1-208ENST00000530008 RGL4Q8IZJ4 473 aa10.26□□□□□ -0.77
CAPRIN1-208ENST00000530008 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
CAPRIN1-208ENST00000530008 FAM13AO94988 1023 aa10.25□□□□□ -0.77
CAPRIN1-208ENST00000530008 STAU1O95793 577 aaKnown RBP10.25□□□□□ -0.77
CAPRIN1-208ENST00000530008 ATAD2Q6PL18 1390 aa10.25□□□□□ -0.77
CAPRIN1-208ENST00000530008 EPHA4P54764 986 aa10.24□□□□□ -0.77
CAPRIN1-208ENST00000530008 TRIM52Q96A61 297 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms