RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 MAP4K5Q9Y4K4 846 aa8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 ESPNB1AK53 854 aa8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 LMOD1P29536 600 aaPredicted RBP8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 CFAP70Q5T0N1 1121 aa8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 ZNF592Q92610 1267 aa8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 TMPRSS4Q9NRS4 437 aa8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 ERCC6L2Q5T890 1561 aa8.84□□□□□ -0.99
AMBRA1-209ENST00000529963 GRIN2AQ12879 1464 aa8.84□□□□□ -0.99
AMBRA1-209ENST00000529963 ERVH48-1M5A8F1 160 aa8.84□□□□□ -0.99
AMBRA1-209ENST00000529963 PLPP7Q8NBV4 271 aa8.84□□□□□ -0.99
AMBRA1-209ENST00000529963 TOR4AQ9NXH8 423 aa8.84□□□□□ -0.99
AMBRA1-209ENST00000529963 PDZRN3Q9UPQ7 1066 aa8.84□□□□□ -0.99
AMBRA1-209ENST00000529963 PCDHB11Q9Y5F2 797 aa8.84□□□□□ -0.99
AMBRA1-209ENST00000529963 WASF2Q9Y6W5 498 aa8.84□□□□□ -0.99
AMBRA1-209ENST00000529963 ATP9BO43861 1147 aa8.83□□□□□ -1
AMBRA1-209ENST00000529963 CDCA8Q53HL2 280 aa8.83□□□□□ -1
AMBRA1-209ENST00000529963 OXLD1Q5BKU9 147 aa8.83□□□□□ -1
AMBRA1-209ENST00000529963 MAFBQ9Y5Q3 323 aaPredicted RBP8.83□□□□□ -1
AMBRA1-209ENST00000529963 USP17L5A8MUK1 530 aa8.82□□□□□ -1
AMBRA1-209ENST00000529963 NNTQ13423 1086 aa8.82□□□□□ -1
AMBRA1-209ENST00000529963 MPNDQ8N594 471 aa8.82□□□□□ -1
AMBRA1-209ENST00000529963 DOLKQ9UPQ8 538 aa8.82□□□□□ -1
AMBRA1-209ENST00000529963 FHAD1B1AJZ9 1412 aa8.82□□□□□ -1
AMBRA1-209ENST00000529963 ADAMTS12P58397 1594 aa8.82□□□□□ -1
AMBRA1-209ENST00000529963 TOP2BQ02880 1626 aa8.82□□□□□ -1
AMBRA1-209ENST00000529963 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.81□□□□□ -1
AMBRA1-209ENST00000529963 RGS20O76081 388 aa8.81□□□□□ -1
AMBRA1-209ENST00000529963 SMPD1P17405 629 aa8.81□□□□□ -1
AMBRA1-209ENST00000529963 NUP160Q12769 1436 aa8.81□□□□□ -1
AMBRA1-209ENST00000529963 RNF20Q5VTR2 975 aa8.81□□□□□ -1
AMBRA1-209ENST00000529963 BIVM-ERCC5R4GMW8 1640 aa8.81□□□□□ -1
AMBRA1-209ENST00000529963 USP17L3A6NCW0 530 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 USP17L4A6NCW7 530 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 PRR20EP86478 221 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 PRR20CP86479 221 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 PRR20DP86480 221 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 PRR20BP86481 221 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 PRR20AP86496 221 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 NR5A1Q13285 461 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 NCOA4Q13772 614 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 PPP1R26Q5T8A7 1209 aaPredicted RBP8.8□□□□□ -1
AMBRA1-209ENST00000529963 TRAF7Q6Q0C0 670 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 CCDC116Q8IYX3 515 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 SCTRP47872 440 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 FBXO41Q8TF61 875 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 HPS1Q92902 700 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 CYLDQ9NQC7 956 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 CHIC2Q9UKJ5 165 aa8.8□□□□□ -1
AMBRA1-209ENST00000529963 ERICH3Q5RHP9 1530 aa8.79□□□□□ -1
AMBRA1-209ENST00000529963 CEP170Q5SW79 1584 aa8.79□□□□□ -1
AMBRA1-209ENST00000529963 KIF13AQ9H1H9 1805 aa8.79□□□□□ -1
AMBRA1-209ENST00000529963 SEPT12Q8IYM1 358 aa8.79□□□□□ -1
AMBRA1-209ENST00000529963 ZNF784Q8NCA9 323 aaPredicted RBP8.79□□□□□ -1
AMBRA1-209ENST00000529963 NFATC2IPQ8NCF5 419 aa8.79□□□□□ -1
AMBRA1-209ENST00000529963 FAM187AA6NFU0 413 aa8.77□□□□□ -1.01
AMBRA1-209ENST00000529963 GFRA3O60609 400 aa8.77□□□□□ -1.01
AMBRA1-209ENST00000529963 WDR4P57081 412 aaKnown RBP8.76□□□□□ -1.01
AMBRA1-209ENST00000529963 DHX9Q08211 1270 aaKnown RBP8.76□□□□□ -1.01
AMBRA1-209ENST00000529963 EML3Q32P44 896 aa8.76□□□□□ -1.01
AMBRA1-209ENST00000529963 MAP7D1Q3KQU3 841 aa8.76□□□□□ -1.01
AMBRA1-209ENST00000529963 ITPKCQ96DU7 683 aa8.76□□□□□ -1.01
AMBRA1-209ENST00000529963 ARXQ96QS3 562 aa8.76□□□□□ -1.01
AMBRA1-209ENST00000529963 ZFAND3Q9H8U3 227 aa8.76□□□□□ -1.01
AMBRA1-209ENST00000529963 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
AMBRA1-209ENST00000529963 SHROOM2Q13796 1616 aa8.76□□□□□ -1.01
AMBRA1-209ENST00000529963 CBLBQ13191 982 aa8.75□□□□□ -1.01
AMBRA1-209ENST00000529963 LILRA1O75019 489 aa8.75□□□□□ -1.01
AMBRA1-209ENST00000529963 ZIC2O95409 532 aaPredicted RBP8.75□□□□□ -1.01
AMBRA1-209ENST00000529963 ADD1P35611 737 aaKnown RBP8.75□□□□□ -1.01
AMBRA1-209ENST00000529963 KANK4Q5T7N3 995 aaPredicted RBP8.75□□□□□ -1.01
AMBRA1-209ENST00000529963 PLEKHM2Q8IWE5 1019 aa8.75□□□□□ -1.01
AMBRA1-209ENST00000529963 VRTNQ9H8Y1 702 aa8.75□□□□□ -1.01
AMBRA1-209ENST00000529963 KDM6BO15054 1643 aa8.74□□□□□ -1.01
AMBRA1-209ENST00000529963 PRG4Q92954 1404 aaPredicted RBP8.74□□□□□ -1.01
AMBRA1-209ENST00000529963 STAU1O95793 577 aaKnown RBP8.74□□□□□ -1.01
AMBRA1-209ENST00000529963 KLF16Q9BXK1 252 aaPredicted RBP8.74□□□□□ -1.01
AMBRA1-209ENST00000529963 EMILIN1Q9Y6C2 1016 aa8.74□□□□□ -1.01
AMBRA1-209ENST00000529963 LMTK3Q96Q04 1460 aa8.73□□□□□ -1.01
AMBRA1-209ENST00000529963 TIMP2P16035 220 aa8.73□□□□□ -1.01
AMBRA1-209ENST00000529963 ERVK-9P63128 1117 aa8.73□□□□□ -1.01
AMBRA1-209ENST00000529963 SRPK2P78362 688 aaKnown RBP8.73□□□□□ -1.01
AMBRA1-209ENST00000529963 MYT1Q01538 1121 aa8.73□□□□□ -1.01
AMBRA1-209ENST00000529963 USP4Q13107 963 aa8.73□□□□□ -1.01
AMBRA1-209ENST00000529963 CC2D2BQ6DHV5 1058 aa8.73□□□□□ -1.01
AMBRA1-209ENST00000529963 PBXIP1Q96AQ6 731 aa8.73□□□□□ -1.01
AMBRA1-209ENST00000529963 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
AMBRA1-209ENST00000529963 HECW2Q9P2P5 1572 aa8.72□□□□□ -1.01
AMBRA1-209ENST00000529963 RASA1P20936 1047 aa8.72□□□□□ -1.01
AMBRA1-209ENST00000529963 CLDN10P78369 228 aa8.72□□□□□ -1.01
AMBRA1-209ENST00000529963 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
AMBRA1-209ENST00000529963 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
AMBRA1-209ENST00000529963 MYCP01106 439 aaPredicted RBP8.71□□□□□ -1.01
AMBRA1-209ENST00000529963 GTF2IP78347 998 aa8.71□□□□□ -1.01
AMBRA1-209ENST00000529963 FAM69CQ0P6D2 419 aa8.71□□□□□ -1.01
AMBRA1-209ENST00000529963 CRTC2Q53ET0 693 aaPredicted RBP8.71□□□□□ -1.01
AMBRA1-209ENST00000529963 AGBL1Q96MI9 1066 aa8.71□□□□□ -1.01
AMBRA1-209ENST00000529963 OSBPL3Q9H4L5 887 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms