RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 ARXQ96QS3 562 aa5.13□□□□□ -1.59
PTPRC-213ENST00000529828 PHF12Q96QT6 1004 aa5.13□□□□□ -1.59
PTPRC-213ENST00000529828 SGIP1Q9BQI5 828 aa5.13□□□□□ -1.59
PTPRC-213ENST00000529828 CPSF1Q10570 1443 aaKnown RBP5.13□□□□□ -1.59
PTPRC-213ENST00000529828 PIK3C2AO00443 1686 aa5.13□□□□□ -1.59
PTPRC-213ENST00000529828 WNK3Q9BYP7 1800 aa5.13□□□□□ -1.59
PTPRC-213ENST00000529828 CENPJQ9HC77 1338 aaPredicted RBP5.13□□□□□ -1.59
PTPRC-213ENST00000529828 GPR162Q16538 588 aa5.13□□□□□ -1.59
PTPRC-213ENST00000529828 AKAP12Q02952 1782 aa5.12□□□□□ -1.59
PTPRC-213ENST00000529828 EXOC5O00471 708 aa5.12□□□□□ -1.59
PTPRC-213ENST00000529828 GIGYF1O75420 1035 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-213ENST00000529828 COL18A1P39060 1754 aa5.12□□□□□ -1.59
PTPRC-213ENST00000529828 TNS2Q63HR2 1409 aa5.12□□□□□ -1.59
PTPRC-213ENST00000529828 ATMINO43313 823 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-213ENST00000529828 CARD10Q9BWT7 1032 aa5.12□□□□□ -1.59
PTPRC-213ENST00000529828 BCL9O00512 1426 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 KCNQ4P56696 695 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 IFFO2Q5TF58 517 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 ARHGEF25Q86VW2 580 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 CDCA7Q9BWT1 371 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-213ENST00000529828 LRRC4BQ9NT99 713 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 QRICH2Q9H0J4 1663 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 TTC21BQ7Z4L5 1316 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 PAPPAQ13219 1627 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 NLGN2Q8NFZ4 835 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 NLRP2Q9NX02 1062 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 NHSQ6T4R5 1651 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 RGPD5Q99666 1765 aa5.11□□□□□ -1.59
PTPRC-213ENST00000529828 BRD4O60885 1362 aaPredicted RBP5.1□□□□□ -1.59
PTPRC-213ENST00000529828 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
PTPRC-213ENST00000529828 STAC3Q96MF2 364 aa5.1□□□□□ -1.59
PTPRC-213ENST00000529828 NFAT5O94916 1531 aa5.1□□□□□ -1.59
PTPRC-213ENST00000529828 CHD4Q14839 1912 aa5.1□□□□□ -1.59
PTPRC-213ENST00000529828 CCDC7Q96M83 1385 aa5.1□□□□□ -1.59
PTPRC-213ENST00000529828 SHANK3Q9BYB0 1731 aa5.09□□□□□ -1.59
PTPRC-213ENST00000529828 KIAA1210Q9ULL0 1709 aa5.09□□□□□ -1.59
PTPRC-213ENST00000529828 TRPM1Q7Z4N2 1603 aa5.09□□□□□ -1.59
PTPRC-213ENST00000529828 MAP3K5Q99683 1374 aa5.09□□□□□ -1.59
PTPRC-213ENST00000529828 ABCC6O95255 1503 aa5.09□□□□□ -1.59
PTPRC-213ENST00000529828 POLD1P28340 1107 aa5.09□□□□□ -1.59
PTPRC-213ENST00000529828 CDAN1Q8IWY9 1227 aa5.09□□□□□ -1.59
PTPRC-213ENST00000529828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTPRC-213ENST00000529828 KCNH5Q8NCM2 988 aa5.09□□□□□ -1.59
PTPRC-213ENST00000529828 BTAF1O14981 1849 aa5.09□□□□□ -1.59
PTPRC-213ENST00000529828 PNPLA7Q6ZV29 1317 aa5.09□□□□□ -1.6
PTPRC-213ENST00000529828 YBX3P16989 372 aaKnown RBP eCLIP5.08□□□□□ -1.62e-7■■□□□ 13.3
PTPRC-213ENST00000529828 MSL1Q68DK7 614 aa5.08□□□□□ -1.6
PTPRC-213ENST00000529828 DDX54Q8TDD1 881 aaKnown RBP5.08□□□□□ -1.6
PTPRC-213ENST00000529828 ZNF526Q8TF50 670 aaPredicted RBP5.08□□□□□ -1.6
PTPRC-213ENST00000529828 SYTL4Q96C24 671 aaPredicted RBP5.08□□□□□ -1.6
PTPRC-213ENST00000529828 WWC3Q9ULE0 1092 aa5.08□□□□□ -1.6
PTPRC-213ENST00000529828 ERBB3P21860 1342 aa5.08□□□□□ -1.6
PTPRC-213ENST00000529828 EVC2Q86UK5 1308 aa5.08□□□□□ -1.6
PTPRC-213ENST00000529828 PCNTO95613 3336 aa5.08□□□□□ -1.6
PTPRC-213ENST00000529828 KTN1Q86UP2 1357 aaKnown RBP5.08□□□□□ -1.6
PTPRC-213ENST00000529828 IL2RBP14784 551 aa5.08□□□□□ -1.6
PTPRC-213ENST00000529828 NME9Q86XW9 330 aa5.08□□□□□ -1.6
PTPRC-213ENST00000529828 ANKRD24Q8TF21 1146 aa5.08□□□□□ -1.6
PTPRC-213ENST00000529828 LTV1Q96GA3 475 aaPredicted RBP5.08□□□□□ -1.6
PTPRC-213ENST00000529828 TFCP2L1Q9NZI6 479 aa5.08□□□□□ -1.6
PTPRC-213ENST00000529828 ATP10DQ9P241 1426 aa5.07□□□□□ -1.6
PTPRC-213ENST00000529828 POTEJP0CG39 1038 aa5.07□□□□□ -1.6
PTPRC-213ENST00000529828 MS4A3Q96HJ5 214 aa5.07□□□□□ -1.6
PTPRC-213ENST00000529828 TTC21AQ8NDW8 1320 aa5.07□□□□□ -1.6
PTPRC-213ENST00000529828 KAT6BQ8WYB5 2073 aa5.07□□□□□ -1.6
PTPRC-213ENST00000529828 PRIM1P49642 420 aaKnown RBP5.06□□□□□ -1.6
PTPRC-213ENST00000529828 TUBGCP6Q96RT7 1819 aa5.06□□□□□ -1.6
PTPRC-213ENST00000529828 TMC1Q8TDI8 760 aa5.06□□□□□ -1.6
PTPRC-213ENST00000529828 L3MBTL2Q969R5 705 aa5.06□□□□□ -1.6
PTPRC-213ENST00000529828 SLC27A3Q5K4L6 730 aa5.05□□□□□ -1.6
PTPRC-213ENST00000529828 COL23A1Q86Y22 540 aaPredicted RBP5.05□□□□□ -1.6
PTPRC-213ENST00000529828 SLC16A10Q8TF71 515 aa5.05□□□□□ -1.6
PTPRC-213ENST00000529828 GPBP1L1Q9HC44 474 aaPredicted RBP5.05□□□□□ -1.6
PTPRC-213ENST00000529828 CCNL1Q9UK58 526 aaPredicted RBP5.05□□□□□ -1.6
PTPRC-213ENST00000529828 ROCK2O75116 1388 aaKnown RBP5.05□□□□□ -1.6
PTPRC-213ENST00000529828 NSD2O96028 1365 aa5.05□□□□□ -1.6
PTPRC-213ENST00000529828 DOT1LQ8TEK3 1739 aa5.05□□□□□ -1.6
PTPRC-213ENST00000529828 LTN1O94822 1766 aa5.05□□□□□ -1.6
PTPRC-213ENST00000529828 GRIN3BO60391 1043 aa5.05□□□□□ -1.6
PTPRC-213ENST00000529828 SBNO2Q9Y2G9 1366 aa5.04□□□□□ -1.6
PTPRC-213ENST00000529828 CD163L1Q9NR16 1453 aa5.04□□□□□ -1.6
PTPRC-213ENST00000529828 MON2Q7Z3U7 1717 aa5.04□□□□□ -1.6
PTPRC-213ENST00000529828 FBLN1P23142 703 aa5.04□□□□□ -1.6
PTPRC-213ENST00000529828 SMIM5Q71RC9 77 aa5.04□□□□□ -1.6
PTPRC-213ENST00000529828 USHBP1Q8N6Y0 703 aa5.04□□□□□ -1.6
PTPRC-213ENST00000529828 SIN3AQ96ST3 1273 aa5.04□□□□□ -1.6
PTPRC-213ENST00000529828 USP31Q70CQ4 1352 aa5.04□□□□□ -1.6
PTPRC-213ENST00000529828 MEGF6O75095 1541 aa5.03□□□□□ -1.6
PTPRC-213ENST00000529828 NEUROD1Q13562 356 aa5.03□□□□□ -1.6
PTPRC-213ENST00000529828 QSER1Q2KHR3 1735 aa5.03□□□□□ -1.6
PTPRC-213ENST00000529828 ANKRD36BQ8N2N9 1353 aa5.03□□□□□ -1.6
PTPRC-213ENST00000529828 SLC12A5Q9H2X9 1139 aa5.03□□□□□ -1.6
PTPRC-213ENST00000529828 COL24A1Q17RW2 1714 aa5.03□□□□□ -1.6
PTPRC-213ENST00000529828 PHF14O94880 888 aa5.03□□□□□ -1.6
PTPRC-213ENST00000529828 HSPA6P17066 643 aa5.03□□□□□ -1.6
PTPRC-213ENST00000529828 A0A1W2PP64 1363 aa5.02□□□□□ -1.61
PTPRC-213ENST00000529828 ADCY9O60503 1353 aa5.02□□□□□ -1.61
PTPRC-213ENST00000529828 USP47Q96K76 1375 aa5.02□□□□□ -1.61
PTPRC-213ENST00000529828 HDGFL2Q7Z4V5 671 aaPredicted RBP5.02□□□□□ -1.61
PTPRC-213ENST00000529828 AMIGO3Q86WK7 504 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms