RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMCO4-205ENST00000529714 THSD7AQ9UPZ6 1657 aa18.1■□□□□ 0.49
SMCO4-205ENST00000529714 NEFMP07197 916 aa18.1■□□□□ 0.49
SMCO4-205ENST00000529714 RGS17Q9UGC6 210 aaPredicted RBP18.1■□□□□ 0.49
SMCO4-205ENST00000529714 RUNDC1Q96C34 613 aa18.09■□□□□ 0.49
SMCO4-205ENST00000529714 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.49
SMCO4-205ENST00000529714 ONECUT3O60422 494 aaPredicted RBP18.08■□□□□ 0.48
SMCO4-205ENST00000529714 RBM6P78332 1123 aaKnown RBP18.08■□□□□ 0.48
SMCO4-205ENST00000529714 AMOTQ4VCS5 1084 aa18.08■□□□□ 0.48
SMCO4-205ENST00000529714 LRRC37A3O60309 1634 aa18.07■□□□□ 0.48
SMCO4-205ENST00000529714 TNS2Q63HR2 1409 aa18.06■□□□□ 0.48
SMCO4-205ENST00000529714 FAM98CQ17RN3 349 aaKnown RBP18.06■□□□□ 0.48
SMCO4-205ENST00000529714 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
SMCO4-205ENST00000529714 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
SMCO4-205ENST00000529714 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
SMCO4-205ENST00000529714 PHACTR3Q96KR7 559 aa18.05■□□□□ 0.48
SMCO4-205ENST00000529714 SHANK3Q9BYB0 1731 aa18.05■□□□□ 0.48
SMCO4-205ENST00000529714 CCDC146Q8IYE0 955 aa18.04■□□□□ 0.48
SMCO4-205ENST00000529714 ZCRB1Q8TBF4 217 aaKnown RBP18.04■□□□□ 0.48
SMCO4-205ENST00000529714 RXRBP28702 533 aa18.03■□□□□ 0.48
SMCO4-205ENST00000529714 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
SMCO4-205ENST00000529714 PCDH11XQ9BZA7 1347 aa18.02■□□□□ 0.48
SMCO4-205ENST00000529714 PCDH11YQ9BZA8 1340 aa18.02■□□□□ 0.48
SMCO4-205ENST00000529714 EXOC5O00471 708 aa18.02■□□□□ 0.48
SMCO4-205ENST00000529714 NFE2L2Q16236 605 aa18.02■□□□□ 0.48
SMCO4-205ENST00000529714 DDB1Q16531 1140 aa18.02■□□□□ 0.48
SMCO4-205ENST00000529714 MTHFSDQ2M296 383 aaKnown RBP18.02■□□□□ 0.48
SMCO4-205ENST00000529714 POTEAQ6S8J7 498 aa18.02■□□□□ 0.48
SMCO4-205ENST00000529714 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
SMCO4-205ENST00000529714 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
SMCO4-205ENST00000529714 APAF1O14727 1248 aa18■□□□□ 0.47
SMCO4-205ENST00000529714 TMPOP42166 694 aaKnown RBP18■□□□□ 0.47
SMCO4-205ENST00000529714 ZNF530Q6P9A1 599 aaPredicted RBP18■□□□□ 0.47
SMCO4-205ENST00000529714 AKAP4Q5JQC9 854 aa17.99■□□□□ 0.47
SMCO4-205ENST00000529714 SEPT12Q8IYM1 358 aa17.99■□□□□ 0.47
SMCO4-205ENST00000529714 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
SMCO4-205ENST00000529714 A0A0G2JS52 829 aa17.98■□□□□ 0.47
SMCO4-205ENST00000529714 CYP27B1O15528 508 aa17.98■□□□□ 0.47
SMCO4-205ENST00000529714 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
SMCO4-205ENST00000529714 PHKG2P15735 406 aa17.98■□□□□ 0.47
SMCO4-205ENST00000529714 MYT1Q01538 1121 aa17.98■□□□□ 0.47
SMCO4-205ENST00000529714 C1orf141Q5JVX7 400 aa17.98■□□□□ 0.47
SMCO4-205ENST00000529714 MAP3K5Q99683 1374 aa17.98■□□□□ 0.47
SMCO4-205ENST00000529714 ADAMTS7Q9UKP4 1686 aa17.98■□□□□ 0.47
SMCO4-205ENST00000529714 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
SMCO4-205ENST00000529714 LMOD3Q0VAK6 560 aa17.97■□□□□ 0.47
SMCO4-205ENST00000529714 RGS12O14924 1447 aa17.97■□□□□ 0.47
SMCO4-205ENST00000529714 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
SMCO4-205ENST00000529714 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
SMCO4-205ENST00000529714 RIPK4P57078 832 aa17.96■□□□□ 0.47
SMCO4-205ENST00000529714 PDE3BQ13370 1112 aa17.96■□□□□ 0.47
SMCO4-205ENST00000529714 NKX1-1Q15270 411 aaPredicted RBP17.96■□□□□ 0.47
SMCO4-205ENST00000529714 CCDC27Q2M243 656 aa17.96■□□□□ 0.47
SMCO4-205ENST00000529714 SCN11AQ9UI33 1791 aa17.95■□□□□ 0.46
SMCO4-205ENST00000529714 DDX54Q8TDD1 881 aaKnown RBP17.95■□□□□ 0.46
SMCO4-205ENST00000529714 VIRMAQ69YN4 1812 aaKnown RBP17.94■□□□□ 0.46
SMCO4-205ENST00000529714 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
SMCO4-205ENST00000529714 BCL9O00512 1426 aa17.94■□□□□ 0.46
SMCO4-205ENST00000529714 MARCH10Q8NA82 808 aaPredicted RBP17.93■□□□□ 0.46
SMCO4-205ENST00000529714 RTF1Q92541 710 aaKnown RBP17.93■□□□□ 0.46
SMCO4-205ENST00000529714 DCAF5Q96JK2 942 aa17.93■□□□□ 0.46
SMCO4-205ENST00000529714 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
SMCO4-205ENST00000529714 KDM6AO15550 1401 aaPredicted RBP17.92■□□□□ 0.46
SMCO4-205ENST00000529714 HNRNPUQ00839 825 aaKnown RBP eCLIP17.92■□□□□ 0.46
SMCO4-205ENST00000529714 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
SMCO4-205ENST00000529714 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
SMCO4-205ENST00000529714 KRT27Q7Z3Y8 459 aa17.91■□□□□ 0.46
SMCO4-205ENST00000529714 MRC1P22897 1456 aa17.9■□□□□ 0.46
SMCO4-205ENST00000529714 TOGARAM1Q9Y4F4 1720 aa17.9■□□□□ 0.46
SMCO4-205ENST00000529714 RNMTO43148 476 aaKnown RBP17.89■□□□□ 0.45
SMCO4-205ENST00000529714 CALD1Q05682 793 aaKnown RBP17.89■□□□□ 0.45
SMCO4-205ENST00000529714 MPRIPQ6WCQ1 1025 aa17.89■□□□□ 0.45
SMCO4-205ENST00000529714 WWC1Q8IX03 1113 aa17.89■□□□□ 0.45
SMCO4-205ENST00000529714 IL17REQ8NFR9 667 aa17.89■□□□□ 0.45
SMCO4-205ENST00000529714 DOT1LQ8TEK3 1739 aa17.89■□□□□ 0.45
SMCO4-205ENST00000529714 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
SMCO4-205ENST00000529714 ZBED9Q6R2W3 1325 aa17.88■□□□□ 0.45
SMCO4-205ENST00000529714 ZNF521Q96K83 1311 aa17.88■□□□□ 0.45
SMCO4-205ENST00000529714 SIPA1L3O60292 1781 aaPredicted RBP17.88■□□□□ 0.45
SMCO4-205ENST00000529714 MCM10Q7L590 875 aa17.87■□□□□ 0.45
SMCO4-205ENST00000529714 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
SMCO4-205ENST00000529714 LGR6Q9HBX8 967 aa17.87■□□□□ 0.45
SMCO4-205ENST00000529714 ITGB4P16144 1822 aa17.86■□□□□ 0.45
SMCO4-205ENST00000529714 DCTN1Q14203 1278 aa17.86■□□□□ 0.45
SMCO4-205ENST00000529714 FAM196AQ6ZSG2 479 aa17.86■□□□□ 0.45
SMCO4-205ENST00000529714 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
SMCO4-205ENST00000529714 IL16Q14005 1332 aa17.86■□□□□ 0.45
SMCO4-205ENST00000529714 NHSQ6T4R5 1651 aa17.86■□□□□ 0.45
SMCO4-205ENST00000529714 SBF2Q86WG5 1849 aa17.86■□□□□ 0.45
SMCO4-205ENST00000529714 TEFQ10587 303 aa17.85■□□□□ 0.45
SMCO4-205ENST00000529714 SENP3-EIF4A1A0A087X0R7 540 aa17.84■□□□□ 0.45
SMCO4-205ENST00000529714 SLC52A2Q9HAB3 445 aa17.84■□□□□ 0.45
SMCO4-205ENST00000529714 CABP4P57796 275 aa17.83■□□□□ 0.44
SMCO4-205ENST00000529714 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
SMCO4-205ENST00000529714 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.44
SMCO4-205ENST00000529714 TAF7Q15545 349 aaPredicted RBP17.82■□□□□ 0.44
SMCO4-205ENST00000529714 IFT57Q9NWB7 429 aa17.82■□□□□ 0.44
SMCO4-205ENST00000529714 PAPPAQ13219 1627 aa17.81■□□□□ 0.44
SMCO4-205ENST00000529714 GOLGA2Q08379 1002 aa17.81■□□□□ 0.44
SMCO4-205ENST00000529714 FAM182BQ5T319 152 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms