RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
TGFBR3-208ENST00000529608 CDCA7Q9BWT1 371 aaPredicted RBP12.25□□□□□ -0.45
TGFBR3-208ENST00000529608 FHDC1Q9C0D6 1143 aaPredicted RBP12.25□□□□□ -0.45
TGFBR3-208ENST00000529608 TTC21AQ8NDW8 1320 aa12.25□□□□□ -0.45
TGFBR3-208ENST00000529608 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
TGFBR3-208ENST00000529608 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
TGFBR3-208ENST00000529608 EXOC5O00471 708 aa12.24□□□□□ -0.45
TGFBR3-208ENST00000529608 CCDC7Q96M83 1385 aa12.24□□□□□ -0.45
TGFBR3-208ENST00000529608 TUBGCP6Q96RT7 1819 aa12.24□□□□□ -0.45
TGFBR3-208ENST00000529608 SYT17Q9BSW7 474 aa12.24□□□□□ -0.45
TGFBR3-208ENST00000529608 STK32BQ9NY57 414 aa12.24□□□□□ -0.45
TGFBR3-208ENST00000529608 CHD4Q14839 1912 aa12.23□□□□□ -0.45
TGFBR3-208ENST00000529608 ROCK2O75116 1388 aaKnown RBP12.23□□□□□ -0.45
TGFBR3-208ENST00000529608 USP31Q70CQ4 1352 aa12.23□□□□□ -0.45
TGFBR3-208ENST00000529608 ERBB3P21860 1342 aa12.23□□□□□ -0.45
TGFBR3-208ENST00000529608 EVX2Q03828 476 aa12.23□□□□□ -0.45
TGFBR3-208ENST00000529608 NME9Q86XW9 330 aa12.23□□□□□ -0.45
TGFBR3-208ENST00000529608 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
TGFBR3-208ENST00000529608 SBNO2Q9Y2G9 1366 aa12.22□□□□□ -0.45
TGFBR3-208ENST00000529608 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
TGFBR3-208ENST00000529608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
TGFBR3-208ENST00000529608 MIER1Q8N108 512 aa12.22□□□□□ -0.45
TGFBR3-208ENST00000529608 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
TGFBR3-208ENST00000529608 LRRC4BQ9NT99 713 aa12.22□□□□□ -0.45
TGFBR3-208ENST00000529608 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
TGFBR3-208ENST00000529608 SHANK3Q9BYB0 1731 aa12.22□□□□□ -0.45
TGFBR3-208ENST00000529608 QSER1Q2KHR3 1735 aa12.21□□□□□ -0.45
TGFBR3-208ENST00000529608 MTFR1LQ9H019 292 aa12.21□□□□□ -0.45
TGFBR3-208ENST00000529608 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
TGFBR3-208ENST00000529608 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
TGFBR3-208ENST00000529608 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
TGFBR3-208ENST00000529608 DOT1LQ8TEK3 1739 aa12.19□□□□□ -0.46
TGFBR3-208ENST00000529608 LY75O60449 1722 aa12.18□□□□□ -0.46
TGFBR3-208ENST00000529608 IL2RBP14784 551 aa12.18□□□□□ -0.46
TGFBR3-208ENST00000529608 ANKRD24Q8TF21 1146 aa12.18□□□□□ -0.46
TGFBR3-208ENST00000529608 SLC12A5Q9H2X9 1139 aa12.18□□□□□ -0.46
TGFBR3-208ENST00000529608 KAT6BQ8WYB5 2073 aa12.17□□□□□ -0.46
TGFBR3-208ENST00000529608 KCNQ4P56696 695 aa12.17□□□□□ -0.46
TGFBR3-208ENST00000529608 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
TGFBR3-208ENST00000529608 ARXQ96QS3 562 aa12.17□□□□□ -0.46
TGFBR3-208ENST00000529608 A0A1W2PP64 1363 aa12.17□□□□□ -0.46
TGFBR3-208ENST00000529608 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
TGFBR3-208ENST00000529608 EDC4Q6P2E9 1401 aaKnown RBP12.15□□□□□ -0.46
TGFBR3-208ENST00000529608 FBLN1P23142 703 aa12.15□□□□□ -0.46
TGFBR3-208ENST00000529608 NSD2O96028 1365 aa12.15□□□□□ -0.46
TGFBR3-208ENST00000529608 MAP3K5Q99683 1374 aa12.15□□□□□ -0.46
TGFBR3-208ENST00000529608 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
TGFBR3-208ENST00000529608 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
TGFBR3-208ENST00000529608 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
TGFBR3-208ENST00000529608 DDX54Q8TDD1 881 aaKnown RBP12.13□□□□□ -0.47
TGFBR3-208ENST00000529608 LTV1Q96GA3 475 aaPredicted RBP12.13□□□□□ -0.47
TGFBR3-208ENST00000529608 MEGF6O75095 1541 aa12.12□□□□□ -0.47
TGFBR3-208ENST00000529608 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
TGFBR3-208ENST00000529608 IP6K1Q92551 441 aa12.12□□□□□ -0.47
TGFBR3-208ENST00000529608 CARD11Q9BXL7 1154 aa12.12□□□□□ -0.47
TGFBR3-208ENST00000529608 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-208ENST00000529608 NLGN2Q8NFZ4 835 aa12.11□□□□□ -0.47
TGFBR3-208ENST00000529608 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
TGFBR3-208ENST00000529608 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-208ENST00000529608 C1QTNF8P60827 252 aa12.1□□□□□ -0.47
TGFBR3-208ENST00000529608 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
TGFBR3-208ENST00000529608 GOLGB1Q14789 3259 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-208ENST00000529608 MAP3K19Q56UN5 1328 aa12.1□□□□□ -0.47
TGFBR3-208ENST00000529608 SENP3-EIF4A1A0A087X0R7 540 aa12.09□□□□□ -0.47
TGFBR3-208ENST00000529608 HOXC9P31274 260 aa12.09□□□□□ -0.47
TGFBR3-208ENST00000529608 C5P01031 1676 aa12.09□□□□□ -0.47
TGFBR3-208ENST00000529608 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
TGFBR3-208ENST00000529608 GPR162Q16538 588 aa12.08□□□□□ -0.48
TGFBR3-208ENST00000529608 SLC27A3Q5K4L6 730 aa12.08□□□□□ -0.48
TGFBR3-208ENST00000529608 SLC16A10Q8TF71 515 aa12.08□□□□□ -0.48
TGFBR3-208ENST00000529608 SYTL4Q96C24 671 aaPredicted RBP12.08□□□□□ -0.48
TGFBR3-208ENST00000529608 TESK2Q96S53 571 aa12.08□□□□□ -0.48
TGFBR3-208ENST00000529608 TOGARAM1Q9Y4F4 1720 aa12.08□□□□□ -0.48
TGFBR3-208ENST00000529608 YBX3P16989 372 aaKnown RBP eCLIP12.07□□□□□ -0.48
TGFBR3-208ENST00000529608 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
TGFBR3-208ENST00000529608 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
TGFBR3-208ENST00000529608 COL23A1Q86Y22 540 aaPredicted RBP12.06□□□□□ -0.48
TGFBR3-208ENST00000529608 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
TGFBR3-208ENST00000529608 USHBP1Q8N6Y0 703 aa12.06□□□□□ -0.48
TGFBR3-208ENST00000529608 CCER1Q8TC90 406 aaPredicted RBP12.06□□□□□ -0.48
TGFBR3-208ENST00000529608 NBPF4Q96M43 638 aa12.06□□□□□ -0.48
TGFBR3-208ENST00000529608 TFCP2L1Q9NZI6 479 aa12.06□□□□□ -0.48
TGFBR3-208ENST00000529608 ITGB4P16144 1822 aa12.06□□□□□ -0.48
TGFBR3-208ENST00000529608 POLD1P28340 1107 aa12.05□□□□□ -0.48
TGFBR3-208ENST00000529608 RRS1Q15050 365 aaKnown RBP12.05□□□□□ -0.48
TGFBR3-208ENST00000529608 ZCRB1Q8TBF4 217 aaKnown RBP12.05□□□□□ -0.48
TGFBR3-208ENST00000529608 PUS7Q96PZ0 661 aaKnown RBP12.05□□□□□ -0.48
TGFBR3-208ENST00000529608 KIF20BQ96Q89 1820 aa12.04□□□□□ -0.48
TGFBR3-208ENST00000529608 ST20-MTHFSA0A0A6YYL1 179 aa12.04□□□□□ -0.48
TGFBR3-208ENST00000529608 COG3Q96JB2 828 aa12.04□□□□□ -0.48
TGFBR3-208ENST00000529608 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
TGFBR3-208ENST00000529608 CCNL1Q9UK58 526 aaPredicted RBP12.04□□□□□ -0.48
TGFBR3-208ENST00000529608 AMPHP49418 695 aa12.03□□□□□ -0.48
TGFBR3-208ENST00000529608 MSL1Q68DK7 614 aa12.03□□□□□ -0.48
TGFBR3-208ENST00000529608 AMIGO3Q86WK7 504 aa12.03□□□□□ -0.48
TGFBR3-208ENST00000529608 UBR3Q6ZT12 1888 aa12.02□□□□□ -0.48
TGFBR3-208ENST00000529608 FYB1O15117 783 aa12.02□□□□□ -0.49
TGFBR3-208ENST00000529608 SMIM5Q71RC9 77 aa12.02□□□□□ -0.49
TGFBR3-208ENST00000529608 GGNBP2Q9H3C7 697 aa12.02□□□□□ -0.49
TGFBR3-208ENST00000529608 C4BP0C0L5 1744 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms