RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 LGR5O75473 907 aa5.4□□□□□ -1.54
AMBRA1-208ENST00000529558 NPR3P17342 541 aa5.4□□□□□ -1.54
AMBRA1-208ENST00000529558 APLP1P51693 650 aa5.4□□□□□ -1.54
AMBRA1-208ENST00000529558 PPP4CP60510 307 aa5.4□□□□□ -1.54
AMBRA1-208ENST00000529558 PSME1Q06323 249 aa5.4□□□□□ -1.54
AMBRA1-208ENST00000529558 SH3RF1Q7Z6J0 888 aa5.4□□□□□ -1.54
AMBRA1-208ENST00000529558 MRPL50Q8N5N7 158 aaKnown RBP5.4□□□□□ -1.54
AMBRA1-208ENST00000529558 SPATA32Q96LK8 384 aa5.4□□□□□ -1.54
AMBRA1-208ENST00000529558 MKNK1Q9BUB5 465 aa5.4□□□□□ -1.54
AMBRA1-208ENST00000529558 CADPSQ9ULU8 1353 aa5.4□□□□□ -1.55
AMBRA1-208ENST00000529558 SCAMP3O14828 347 aaKnown RBP5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 SMARCA5O60264 1052 aaPredicted RBP5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 ERCC5P28715 1186 aaPredicted RBP5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 FKBP5Q13451 457 aaPredicted RBP5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 VARS2Q5ST30 1063 aaKnown RBP5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 LDLRAD1Q5T700 205 aa5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 TSEN2Q8NCE0 465 aaKnown RBP5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 HELQQ8TDG4 1101 aa5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 RBCK1Q9BYM8 510 aa5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 UNC93B1Q9H1C4 597 aa5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 PPP1R1BQ9UD71 204 aaPredicted RBP5.39□□□□□ -1.55
AMBRA1-208ENST00000529558 TK2O00142 265 aa5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 FAM13AO94988 1023 aa5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 P4HBP07237 508 aaKnown RBP5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 HDLBPQ00341 1268 aaKnown RBP5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 NAA30Q147X3 362 aaPredicted RBP5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 PTCRAQ6ISU1 281 aaPredicted RBP5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 TMC7Q7Z402 723 aa5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 PURBQ96QR8 312 aaKnown RBP5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 SPSB2Q99619 263 aa5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 ERBB3P21860 1342 aa5.38□□□□□ -1.55
AMBRA1-208ENST00000529558 ESPNB1AK53 854 aa5.37□□□□□ -1.55
AMBRA1-208ENST00000529558 CARD14Q9BXL6 1004 aa5.37□□□□□ -1.55
AMBRA1-208ENST00000529558 MAGEB6P1A0A0J9YX57 407 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 SOWAHBA6NEL2 793 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 TREHO43280 583 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 IGFBP4P22692 258 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 ERFEQ4G0M1 354 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 C9orf131Q5VYM1 1079 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 SP7Q8TDD2 431 aaPredicted RBP5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 PIK3R5Q8WYR1 880 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 CITED4Q96RK1 184 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 PRDM9Q9NQV7 894 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 TSR3Q9UJK0 312 aaKnown RBP5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 HPS5Q9UPZ3 1129 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 PCDHB11Q9Y5F2 797 aa5.36□□□□□ -1.55
AMBRA1-208ENST00000529558 FOXO3O43524 673 aa5.35□□□□□ -1.55
AMBRA1-208ENST00000529558 FGD1P98174 961 aa5.35□□□□□ -1.55
AMBRA1-208ENST00000529558 FMR1Q06787 632 aaKnown RBP eCLIP5.35□□□□□ -1.55
AMBRA1-208ENST00000529558 RAD51AP2Q09MP3 1159 aa5.35□□□□□ -1.55
AMBRA1-208ENST00000529558 DSC3Q14574 896 aa5.35□□□□□ -1.55
AMBRA1-208ENST00000529558 BPHLQ86WA6 291 aaPredicted RBP5.35□□□□□ -1.55
AMBRA1-208ENST00000529558 SEPT12Q8IYM1 358 aa5.35□□□□□ -1.55
AMBRA1-208ENST00000529558 ZNF687Q8N1G0 1237 aa5.35□□□□□ -1.55
AMBRA1-208ENST00000529558 GAS2L2Q8NHY3 880 aa5.35□□□□□ -1.55
AMBRA1-208ENST00000529558 PPM1GO15355 546 aaPredicted RBP5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 NDUFB5O43674 189 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 XPCQ01831 940 aaPredicted RBP5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 PLCB3Q01970 1234 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 NBPF20Q3BBV1 942 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 C4orf48Q5BLP8 95 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 METTL16Q86W50 562 aaKnown RBP5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 CCDC24Q8N4L8 307 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 TMEM87AQ8NBN3 555 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 ANKK1Q8NFD2 765 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 BAP1Q92560 729 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 ZNF358Q9NW07 568 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 PCDH10Q9P2E7 1040 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 PARP2Q9UGN5 583 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 BRPF3Q9ULD4 1205 aa5.34□□□□□ -1.55
AMBRA1-208ENST00000529558 TMEM229AB2RXF0 380 aa5.33□□□□□ -1.56
AMBRA1-208ENST00000529558 PRPF40AO75400 957 aaKnown RBP5.33□□□□□ -1.56
AMBRA1-208ENST00000529558 LDHBP07195 334 aaKnown RBP5.33□□□□□ -1.56
AMBRA1-208ENST00000529558 MPSTP25325 297 aa5.33□□□□□ -1.56
AMBRA1-208ENST00000529558 ITGAEP38570 1179 aa5.33□□□□□ -1.56
AMBRA1-208ENST00000529558 AGERQ15109 404 aa5.33□□□□□ -1.56
AMBRA1-208ENST00000529558 TMC4Q7Z404 712 aa5.33□□□□□ -1.56
AMBRA1-208ENST00000529558 FOXJ1Q92949 421 aa5.33□□□□□ -1.56
AMBRA1-208ENST00000529558 SLC10A4Q96EP9 437 aa5.33□□□□□ -1.56
AMBRA1-208ENST00000529558 ATAD2Q6PL18 1390 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 HRO43593 1189 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 MYCP01106 439 aaPredicted RBP5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 IGHA2P01877 340 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 BCAMP50895 628 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 DAB2P98082 770 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 EHHADHQ08426 723 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 ADGRD1Q6QNK2 874 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 DPH6Q7L8W6 267 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 NT5DC4Q86YG4 428 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 ZNF511Q8NB15 262 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 SLC43A3Q8NBI5 491 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 TMC1Q8TDI8 760 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 SCG3Q8WXD2 468 aaKnown RBP5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 DMRTB1Q96MA1 342 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 FAM161BQ96MY7 647 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 DUSP9Q99956 384 aaKnown RBP5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 C1QTNF2Q9BXJ5 285 aa5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 METTL5Q9NRN9 209 aaKnown RBP5.32□□□□□ -1.56
AMBRA1-208ENST00000529558 CDV3Q9UKY7 258 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms