RNA–Protein interactions for RNA: ENST00000529251.1

TCN1-202, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-202ENST00000529251 RNF20Q5VTR2 975 aa7.74□□□□□ -1.17
TCN1-202ENST00000529251 PROSER2Q86WR7 435 aaPredicted RBP7.74□□□□□ -1.17
TCN1-202ENST00000529251 FNBP4Q8N3X1 1017 aaPredicted RBP7.74□□□□□ -1.17
TCN1-202ENST00000529251 RNF217Q8TC41 542 aa7.74□□□□□ -1.17
TCN1-202ENST00000529251 ZNF592Q92610 1267 aa7.74□□□□□ -1.17
TCN1-202ENST00000529251 ARID3AQ99856 593 aa7.74□□□□□ -1.17
TCN1-202ENST00000529251 ZNF330Q9Y3S2 320 aaPredicted RBP7.74□□□□□ -1.17
TCN1-202ENST00000529251 SCTRP47872 440 aa7.73□□□□□ -1.17
TCN1-202ENST00000529251 FOXD4L5Q5VV16 416 aaPredicted RBP7.73□□□□□ -1.17
TCN1-202ENST00000529251 A6NJR5 290 aa7.72□□□□□ -1.17
TCN1-202ENST00000529251 RAD21O60216 631 aa7.72□□□□□ -1.17
TCN1-202ENST00000529251 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
TCN1-202ENST00000529251 INSM1Q01101 510 aaPredicted RBP7.72□□□□□ -1.17
TCN1-202ENST00000529251 POLMQ9NP87 494 aaPredicted RBP7.72□□□□□ -1.17
TCN1-202ENST00000529251 CEP126Q9P2H0 1117 aa7.72□□□□□ -1.17
TCN1-202ENST00000529251 VAC14Q08AM6 782 aa7.71□□□□□ -1.18
TCN1-202ENST00000529251 CC2D2BQ6DHV5 1058 aa7.71□□□□□ -1.18
TCN1-202ENST00000529251 TRIM52Q96A61 297 aa7.71□□□□□ -1.18
TCN1-202ENST00000529251 PRM3Q9NNZ6 103 aa7.71□□□□□ -1.18
TCN1-202ENST00000529251 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.18
TCN1-202ENST00000529251 SENP3-EIF4A1A0A087X0R7 540 aa7.7□□□□□ -1.18
TCN1-202ENST00000529251 SLC35F4A4IF30 521 aa7.7□□□□□ -1.18
TCN1-202ENST00000529251 ATP5J2-PTCD1G3V325 749 aa7.7□□□□□ -1.18
TCN1-202ENST00000529251 CCDC155Q8N6L0 562 aa7.7□□□□□ -1.18
TCN1-202ENST00000529251 CCDC85AQ96PX6 553 aaPredicted RBP7.7□□□□□ -1.18
TCN1-202ENST00000529251 OSBPL3Q9H4L5 887 aa7.7□□□□□ -1.18
TCN1-202ENST00000529251 RNF144AP50876 292 aaPredicted RBP7.69□□□□□ -1.18
TCN1-202ENST00000529251 A0A1W2PRU2 124 aa7.68□□□□□ -1.18
TCN1-202ENST00000529251 EIF4G2P78344 907 aaKnown RBP eCLIP7.68□□□□□ -1.18
TCN1-202ENST00000529251 PHTF2Q8N3S3 785 aa7.68□□□□□ -1.18
TCN1-202ENST00000529251 ADAMTS19Q8TE59 1207 aa7.68□□□□□ -1.18
TCN1-202ENST00000529251 STK17AQ9UEE5 414 aa7.68□□□□□ -1.18
TCN1-202ENST00000529251 ERICH6Q7L0X2 663 aa7.67□□□□□ -1.18
TCN1-202ENST00000529251 CYP2U1Q7Z449 544 aa7.67□□□□□ -1.18
TCN1-202ENST00000529251 GPR161Q8N6U8 529 aaKnown RBP7.67□□□□□ -1.18
TCN1-202ENST00000529251 NANOS1Q8WY41 292 aaKnown RBP7.67□□□□□ -1.18
TCN1-202ENST00000529251 CDCA7Q9BWT1 371 aaPredicted RBP7.67□□□□□ -1.18
TCN1-202ENST00000529251 ITGA6P23229 1130 aa7.66□□□□□ -1.18
TCN1-202ENST00000529251 GPC1P35052 558 aa7.66□□□□□ -1.18
TCN1-202ENST00000529251 CLN3Q13286 438 aa7.66□□□□□ -1.18
TCN1-202ENST00000529251 TSGA10IPQ3SY00 556 aa7.66□□□□□ -1.18
TCN1-202ENST00000529251 LYSMD3Q7Z3D4 306 aa7.66□□□□□ -1.18
TCN1-202ENST00000529251 CHIC2Q9UKJ5 165 aa7.66□□□□□ -1.18
TCN1-202ENST00000529251 MEN1O00255 615 aa7.65□□□□□ -1.18
TCN1-202ENST00000529251 KRT76Q01546 638 aa7.65□□□□□ -1.18
TCN1-202ENST00000529251 WASHC4Q2M389 1173 aa7.64□□□□□ -1.19
TCN1-202ENST00000529251 PRICKLE2Q7Z3G6 844 aa7.64□□□□□ -1.19
TCN1-202ENST00000529251 CCDC82Q8N4S0 544 aa7.64□□□□□ -1.19
TCN1-202ENST00000529251 ZSCAN1Q8NBB4 408 aa7.64□□□□□ -1.19
TCN1-202ENST00000529251 ARHGEF10LQ9HCE6 1279 aa7.64□□□□□ -1.19
TCN1-202ENST00000529251 GRIP2Q9C0E4 1043 aa7.63□□□□□ -1.19
TCN1-202ENST00000529251 GNRH1P01148 92 aa7.62□□□□□ -1.19
TCN1-202ENST00000529251 RHOQP17081 205 aa7.62□□□□□ -1.19
TCN1-202ENST00000529251 SLFNL1Q499Z3 407 aa7.62□□□□□ -1.19
TCN1-202ENST00000529251 RNF135Q8IUD6 432 aa7.62□□□□□ -1.19
TCN1-202ENST00000529251 VWA5B2Q8N398 1253 aa7.62□□□□□ -1.19
TCN1-202ENST00000529251 RAB6BQ9NRW1 208 aa7.62□□□□□ -1.19
TCN1-202ENST00000529251 CUEDC1Q9NWM3 386 aaPredicted RBP7.62□□□□□ -1.19
TCN1-202ENST00000529251 DOLKQ9UPQ8 538 aa7.62□□□□□ -1.19
TCN1-202ENST00000529251 HRH3Q9Y5N1 445 aa7.62□□□□□ -1.19
TCN1-202ENST00000529251 MYCP01106 439 aaPredicted RBP7.61□□□□□ -1.19
TCN1-202ENST00000529251 IL2RAP01589 272 aa7.61□□□□□ -1.19
TCN1-202ENST00000529251 HDGFL1Q5TGJ6 251 aa7.61□□□□□ -1.19
TCN1-202ENST00000529251 GLMNQ92990 594 aa7.61□□□□□ -1.19
TCN1-202ENST00000529251 NLRP3Q96P20 1036 aa7.61□□□□□ -1.19
TCN1-202ENST00000529251 SPATA31C2B4DYI2 1134 aa7.6□□□□□ -1.19
TCN1-202ENST00000529251 RNFT1Q5M7Z0 435 aa7.6□□□□□ -1.19
TCN1-202ENST00000529251 CNKSR1Q969H4 720 aa7.6□□□□□ -1.19
TCN1-202ENST00000529251 ESYT1Q9BSJ8 1104 aa7.6□□□□□ -1.19
TCN1-202ENST00000529251 COL25A1Q9BXS0 654 aaPredicted RBP7.6□□□□□ -1.19
TCN1-202ENST00000529251 ESF1Q9H501 851 aaKnown RBP7.6□□□□□ -1.19
TCN1-202ENST00000529251 SOX11P35716 441 aa7.59□□□□□ -1.19
TCN1-202ENST00000529251 POU4F2Q12837 409 aa7.59□□□□□ -1.19
TCN1-202ENST00000529251 SLC27A3Q5K4L6 730 aa7.59□□□□□ -1.19
TCN1-202ENST00000529251 NBPF10Q6P3W6 841 aaKnown RBP7.59□□□□□ -1.19
TCN1-202ENST00000529251 NBPF15Q8N660 670 aa7.59□□□□□ -1.19
TCN1-202ENST00000529251 XAGE2Q96GT9 111 aa7.59□□□□□ -1.19
TCN1-202ENST00000529251 CDC14CA4D256 554 aa7.58□□□□□ -1.2
TCN1-202ENST00000529251 STAU1O95793 577 aaKnown RBP7.58□□□□□ -1.2
TCN1-202ENST00000529251 USP4Q13107 963 aa7.58□□□□□ -1.2
TCN1-202ENST00000529251 SEMA3FQ13275 785 aa7.58□□□□□ -1.2
TCN1-202ENST00000529251 WDR44Q5JSH3 913 aa7.58□□□□□ -1.2
TCN1-202ENST00000529251 SV2AQ7L0J3 742 aa7.58□□□□□ -1.2
TCN1-202ENST00000529251 CALR3Q96L12 384 aaKnown RBP7.58□□□□□ -1.2
TCN1-202ENST00000529251 CNTNAP3BQ96NU0 1288 aa7.58□□□□□ -1.2
TCN1-202ENST00000529251 CNTNAP3Q9BZ76 1288 aa7.58□□□□□ -1.2
TCN1-202ENST00000529251 FHDC1Q9C0D6 1143 aaPredicted RBP7.58□□□□□ -1.2
TCN1-202ENST00000529251 ALG2Q9H553 416 aa7.58□□□□□ -1.2
TCN1-202ENST00000529251 DYRK1BQ9Y463 629 aa7.58□□□□□ -1.2
TCN1-202ENST00000529251 PIK3CDO00329 1044 aa7.57□□□□□ -1.2
TCN1-202ENST00000529251 CENPCQ03188 943 aa7.57□□□□□ -1.2
TCN1-202ENST00000529251 MAP7D1Q3KQU3 841 aa7.57□□□□□ -1.2
TCN1-202ENST00000529251 OXLD1Q5BKU9 147 aa7.57□□□□□ -1.2
TCN1-202ENST00000529251 PLPP7Q8NBV4 271 aa7.57□□□□□ -1.2
TCN1-202ENST00000529251 ZNF837Q96EG3 531 aaPredicted RBP7.56□□□□□ -1.2
TCN1-202ENST00000529251 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
TCN1-202ENST00000529251 ETNK1Q9HBU6 452 aa7.56□□□□□ -1.2
TCN1-202ENST00000529251 FAM181BA6NEQ2 426 aa7.55□□□□□ -1.2
TCN1-202ENST00000529251 RFX1P22670 979 aa7.55□□□□□ -1.2
TCN1-202ENST00000529251 GAS6Q14393 721 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms