RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 BRWD3Q6RI45 1802 aa19.23■□□□□ 0.67
UBXN1-209ENST00000528907 U2SURPO15042 1029 aaKnown RBP19.23■□□□□ 0.67
UBXN1-209ENST00000528907 FCHSD2O94868 740 aa19.23■□□□□ 0.67
UBXN1-209ENST00000528907 TATP17735 454 aaPredicted RBP19.23■□□□□ 0.67
UBXN1-209ENST00000528907 CCDC184Q52MB2 194 aa19.22■□□□□ 0.67
UBXN1-209ENST00000528907 AEBP1Q8IUX7 1158 aa19.22■□□□□ 0.67
UBXN1-209ENST00000528907 SEPT12Q8IYM1 358 aa19.22■□□□□ 0.67
UBXN1-209ENST00000528907 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
UBXN1-209ENST00000528907 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.67
UBXN1-209ENST00000528907 RSPH6AQ9H0K4 717 aa19.21■□□□□ 0.67
UBXN1-209ENST00000528907 MRS2Q9HD23 443 aa19.21■□□□□ 0.67
UBXN1-209ENST00000528907 EXOC5O00471 708 aa19.2■□□□□ 0.66
UBXN1-209ENST00000528907 DDB1Q16531 1140 aa19.2■□□□□ 0.66
UBXN1-209ENST00000528907 PNISRQ8TF01 805 aaKnown RBP19.2■□□□□ 0.66
UBXN1-209ENST00000528907 PNNQ9H307 717 aaKnown RBP19.2■□□□□ 0.66
UBXN1-209ENST00000528907 HMOX1P09601 288 aa19.19■□□□□ 0.66
UBXN1-209ENST00000528907 AMOTQ4VCS5 1084 aa19.19■□□□□ 0.66
UBXN1-209ENST00000528907 BCL9O00512 1426 aa19.18■□□□□ 0.66
UBXN1-209ENST00000528907 WDR43Q15061 677 aaKnown RBP eCLIP19.18■□□□□ 0.66
UBXN1-209ENST00000528907 MIER1Q8N108 512 aa19.18■□□□□ 0.66
UBXN1-209ENST00000528907 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
UBXN1-209ENST00000528907 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
UBXN1-209ENST00000528907 SPG7Q9UQ90 795 aa19.17■□□□□ 0.66
UBXN1-209ENST00000528907 PLEKHO1Q53GL0 409 aaPredicted RBP19.16■□□□□ 0.66
UBXN1-209ENST00000528907 PRKAR2BP31323 418 aa19.15■□□□□ 0.66
UBXN1-209ENST00000528907 ADAMTS8Q9UP79 889 aa19.15■□□□□ 0.66
UBXN1-209ENST00000528907 PCDH11XQ9BZA7 1347 aa19.15■□□□□ 0.66
UBXN1-209ENST00000528907 PCDH11YQ9BZA8 1340 aa19.15■□□□□ 0.66
UBXN1-209ENST00000528907 PDE3BQ13370 1112 aa19.14■□□□□ 0.65
UBXN1-209ENST00000528907 KRT27Q7Z3Y8 459 aa19.14■□□□□ 0.65
UBXN1-209ENST00000528907 A0A0G2JS52 829 aa19.13■□□□□ 0.65
UBXN1-209ENST00000528907 MYT1Q01538 1121 aa19.13■□□□□ 0.65
UBXN1-209ENST00000528907 ADAMTS7Q9UKP4 1686 aa19.13■□□□□ 0.65
UBXN1-209ENST00000528907 NKX1-1Q15270 411 aaPredicted RBP19.12■□□□□ 0.65
UBXN1-209ENST00000528907 MARCH10Q8NA82 808 aaPredicted RBP19.12■□□□□ 0.65
UBXN1-209ENST00000528907 IFNL2Q8IZJ0 200 aa19.11■□□□□ 0.65
UBXN1-209ENST00000528907 GAS2L2Q8NHY3 880 aa19.11■□□□□ 0.65
UBXN1-209ENST00000528907 LRP5O75197 1615 aa19.11■□□□□ 0.65
UBXN1-209ENST00000528907 SBF2Q86WG5 1849 aa19.1■□□□□ 0.65
UBXN1-209ENST00000528907 CYP27B1O15528 508 aa19.1■□□□□ 0.65
UBXN1-209ENST00000528907 NEFMP07197 916 aa19.1■□□□□ 0.65
UBXN1-209ENST00000528907 PHKG2P15735 406 aa19.1■□□□□ 0.65
UBXN1-209ENST00000528907 MTHFSDQ2M296 383 aaKnown RBP19.1■□□□□ 0.65
UBXN1-209ENST00000528907 RUNDC1Q96C34 613 aa19.1■□□□□ 0.65
UBXN1-209ENST00000528907 PHACTR3Q96KR7 559 aa19.1■□□□□ 0.65
UBXN1-209ENST00000528907 AKAP4Q5JQC9 854 aa19.09■□□□□ 0.65
UBXN1-209ENST00000528907 DLG5Q8TDM6 1919 aa19.08■□□□□ 0.65
UBXN1-209ENST00000528907 HSP90AB1P08238 724 aaKnown RBP19.08■□□□□ 0.64
UBXN1-209ENST00000528907 FAM196AQ6ZSG2 479 aa19.08■□□□□ 0.64
UBXN1-209ENST00000528907 VIRMAQ69YN4 1812 aaKnown RBP19.08■□□□□ 0.64
UBXN1-209ENST00000528907 SCN11AQ9UI33 1791 aa19.08■□□□□ 0.64
UBXN1-209ENST00000528907 MAPK8IP3Q9UPT6 1336 aa19.07■□□□□ 0.64
UBXN1-209ENST00000528907 NCBP3Q53F19 620 aaKnown RBP19.07■□□□□ 0.64
UBXN1-209ENST00000528907 ZNF530Q6P9A1 599 aaPredicted RBP19.07■□□□□ 0.64
UBXN1-209ENST00000528907 DDX54Q8TDD1 881 aaKnown RBP19.07■□□□□ 0.64
UBXN1-209ENST00000528907 NHSQ6T4R5 1651 aa19.07■□□□□ 0.64
UBXN1-209ENST00000528907 DOT1LQ8TEK3 1739 aa19.06■□□□□ 0.64
UBXN1-209ENST00000528907 TOGARAM1Q9Y4F4 1720 aa19.06■□□□□ 0.64
UBXN1-209ENST00000528907 C1orf141Q5JVX7 400 aa19.06■□□□□ 0.64
UBXN1-209ENST00000528907 DEFB132Q7Z7B7 95 aa19.06■□□□□ 0.64
UBXN1-209ENST00000528907 HTATSF1O43719 755 aaKnown RBP19.05■□□□□ 0.64
UBXN1-209ENST00000528907 SF3B2Q13435 895 aaKnown RBP19.05■□□□□ 0.64
UBXN1-209ENST00000528907 NFE2L2Q16236 605 aa19.05■□□□□ 0.64
UBXN1-209ENST00000528907 DCAF5Q96JK2 942 aa19.05■□□□□ 0.64
UBXN1-209ENST00000528907 MAP3K5Q99683 1374 aa19.05■□□□□ 0.64
UBXN1-209ENST00000528907 KDM6AO15550 1401 aaPredicted RBP19.03■□□□□ 0.64
UBXN1-209ENST00000528907 ITGB4P16144 1822 aa19.03■□□□□ 0.64
UBXN1-209ENST00000528907 GNAT3A8MTJ3 354 aa19.03■□□□□ 0.64
UBXN1-209ENST00000528907 MRC1P22897 1456 aa19.03■□□□□ 0.64
UBXN1-209ENST00000528907 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
UBXN1-209ENST00000528907 CCDC146Q8IYE0 955 aa19.02■□□□□ 0.64
UBXN1-209ENST00000528907 FAM9BQ8IZU0 186 aa19.02■□□□□ 0.64
UBXN1-209ENST00000528907 ERVV-2B6SEH9 535 aa19.01■□□□□ 0.63
UBXN1-209ENST00000528907 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
UBXN1-209ENST00000528907 SIPA1L3O60292 1781 aaPredicted RBP19.01■□□□□ 0.63
UBXN1-209ENST00000528907 TNS1Q9HBL0 1735 aaKnown RBP19■□□□□ 0.63
UBXN1-209ENST00000528907 FAM182BQ5T319 152 aa19■□□□□ 0.63
UBXN1-209ENST00000528907 NGEFQ8N5V2 710 aa19■□□□□ 0.63
UBXN1-209ENST00000528907 APAF1O14727 1248 aa18.98■□□□□ 0.63
UBXN1-209ENST00000528907 RNMTO43148 476 aaKnown RBP18.98■□□□□ 0.63
UBXN1-209ENST00000528907 LMOD3Q0VAK6 560 aa18.98■□□□□ 0.63
UBXN1-209ENST00000528907 RGPD3A6NKT7 1758 aaPredicted RBP18.97■□□□□ 0.63
UBXN1-209ENST00000528907 RGPD4Q7Z3J3 1758 aa18.97■□□□□ 0.63
UBXN1-209ENST00000528907 RIPK4P57078 832 aa18.97■□□□□ 0.63
UBXN1-209ENST00000528907 CCDC27Q2M243 656 aa18.97■□□□□ 0.63
UBXN1-209ENST00000528907 MPRIPQ6WCQ1 1025 aa18.97■□□□□ 0.63
UBXN1-209ENST00000528907 IL17REQ8NFR9 667 aa18.97■□□□□ 0.63
UBXN1-209ENST00000528907 BCL11BQ9C0K0 894 aaPredicted RBP18.97■□□□□ 0.63
UBXN1-209ENST00000528907 BTAF1O14981 1849 aa18.97■□□□□ 0.63
UBXN1-209ENST00000528907 RTF1Q92541 710 aaKnown RBP18.96■□□□□ 0.63
UBXN1-209ENST00000528907 LGR6Q9HBX8 967 aa18.96■□□□□ 0.63
UBXN1-209ENST00000528907 TRIM35Q9UPQ4 493 aa18.95■□□□□ 0.62
UBXN1-209ENST00000528907 PAPPAQ13219 1627 aa18.95■□□□□ 0.62
UBXN1-209ENST00000528907 PSDA5PKW4 1024 aaPredicted RBP18.94■□□□□ 0.62
UBXN1-209ENST00000528907 PRIM1P49642 420 aaKnown RBP18.94■□□□□ 0.62
UBXN1-209ENST00000528907 SLC52A2Q9HAB3 445 aa18.94■□□□□ 0.62
UBXN1-209ENST00000528907 KCNQ2O43526 872 aa18.93■□□□□ 0.62
UBXN1-209ENST00000528907 ACSBG1Q96GR2 724 aa18.93■□□□□ 0.62
UBXN1-209ENST00000528907 TRIM37O94972 964 aa18.92■□□□□ 0.62
UBXN1-209ENST00000528907 BAG6P46379 1132 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms