RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TCP11L2Q8N4U5 519 aa16.13■□□□□ 0.17
TRAF3IP2-211ENST00000528599 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
TRAF3IP2-211ENST00000528599 MEGF6O75095 1541 aa16.13■□□□□ 0.17
TRAF3IP2-211ENST00000528599 BARGINQ6ZT62 677 aa16.12■□□□□ 0.17
TRAF3IP2-211ENST00000528599 RUNDC1Q96C34 613 aa16.12■□□□□ 0.17
TRAF3IP2-211ENST00000528599 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
TRAF3IP2-211ENST00000528599 PNNQ9H307 717 aaKnown RBP16.11■□□□□ 0.17
TRAF3IP2-211ENST00000528599 LRRC37A3O60309 1634 aa16.11■□□□□ 0.17
TRAF3IP2-211ENST00000528599 PARP4Q9UKK3 1724 aaKnown RBP16.11■□□□□ 0.17
TRAF3IP2-211ENST00000528599 DISP2A7MBM2 1401 aa16.11■□□□□ 0.17
TRAF3IP2-211ENST00000528599 SENP3-EIF4A1A0A087X0R7 540 aa16.11■□□□□ 0.17
TRAF3IP2-211ENST00000528599 A0A0G2JS52 829 aa16.1■□□□□ 0.17
TRAF3IP2-211ENST00000528599 IL2RBP14784 551 aa16.1■□□□□ 0.17
TRAF3IP2-211ENST00000528599 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
TRAF3IP2-211ENST00000528599 MYT1Q01538 1121 aa16.1■□□□□ 0.17
TRAF3IP2-211ENST00000528599 THRAP3Q9Y2W1 955 aaKnown RBP16.1■□□□□ 0.17
TRAF3IP2-211ENST00000528599 FAM182BQ5T319 152 aa16.09■□□□□ 0.17
TRAF3IP2-211ENST00000528599 MAPK8IP3Q9UPT6 1336 aa16.09■□□□□ 0.17
TRAF3IP2-211ENST00000528599 APAF1O14727 1248 aa16.08■□□□□ 0.17
TRAF3IP2-211ENST00000528599 OVOS2A0A0G2JMS6 1433 aa16.08■□□□□ 0.16
TRAF3IP2-211ENST00000528599 MTHFSDQ2M296 383 aaKnown RBP16.08■□□□□ 0.16
TRAF3IP2-211ENST00000528599 NEFMP07197 916 aa16.07■□□□□ 0.16
TRAF3IP2-211ENST00000528599 KRT27Q7Z3Y8 459 aa16.07■□□□□ 0.16
TRAF3IP2-211ENST00000528599 PLEKHO1Q53GL0 409 aaPredicted RBP16.06■□□□□ 0.16
TRAF3IP2-211ENST00000528599 RRP7AQ9Y3A4 280 aaKnown RBP16.06■□□□□ 0.16
TRAF3IP2-211ENST00000528599 TMPOP42166 694 aaKnown RBP16.05■□□□□ 0.16
TRAF3IP2-211ENST00000528599 NFE2L2Q16236 605 aa16.05■□□□□ 0.16
TRAF3IP2-211ENST00000528599 UPF1Q92900 1129 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRAF3IP2-211ENST00000528599 CDCA7Q9BWT1 371 aaPredicted RBP16.05■□□□□ 0.16
TRAF3IP2-211ENST00000528599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRAF3IP2-211ENST00000528599 PLEKHG2Q9H7P9 1386 aa16.05■□□□□ 0.16
TRAF3IP2-211ENST00000528599 AMOTQ4VCS5 1084 aa16.05■□□□□ 0.16
TRAF3IP2-211ENST00000528599 PKD1L3Q7Z443 1732 aa16.05■□□□□ 0.16
TRAF3IP2-211ENST00000528599 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
TRAF3IP2-211ENST00000528599 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
TRAF3IP2-211ENST00000528599 NEUROD2Q15784 382 aa16.04■□□□□ 0.16
TRAF3IP2-211ENST00000528599 SPG7Q9UQ90 795 aa16.04■□□□□ 0.16
TRAF3IP2-211ENST00000528599 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRAF3IP2-211ENST00000528599 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
TRAF3IP2-211ENST00000528599 GAS2L2Q8NHY3 880 aa16.03■□□□□ 0.16
TRAF3IP2-211ENST00000528599 SALL2Q9Y467 1007 aaPredicted RBP16.03■□□□□ 0.16
TRAF3IP2-211ENST00000528599 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.16
TRAF3IP2-211ENST00000528599 RIPK4P57078 832 aa16.02■□□□□ 0.16
TRAF3IP2-211ENST00000528599 YTHDC1Q96MU7 727 aaKnown RBP16.02■□□□□ 0.16
TRAF3IP2-211ENST00000528599 EXOC5O00471 708 aa16.02■□□□□ 0.15
TRAF3IP2-211ENST00000528599 CYP27B1O15528 508 aa16.02■□□□□ 0.15
TRAF3IP2-211ENST00000528599 TNS2Q63HR2 1409 aa16.01■□□□□ 0.15
TRAF3IP2-211ENST00000528599 DDB1Q16531 1140 aa16.01■□□□□ 0.15
TRAF3IP2-211ENST00000528599 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
TRAF3IP2-211ENST00000528599 DLG5Q8TDM6 1919 aa16■□□□□ 0.15
TRAF3IP2-211ENST00000528599 PHKG2P15735 406 aa16■□□□□ 0.15
TRAF3IP2-211ENST00000528599 DDX54Q8TDD1 881 aaKnown RBP16■□□□□ 0.15
TRAF3IP2-211ENST00000528599 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
TRAF3IP2-211ENST00000528599 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
TRAF3IP2-211ENST00000528599 AKAP4Q5JQC9 854 aa15.99■□□□□ 0.15
TRAF3IP2-211ENST00000528599 MARCH10Q8NA82 808 aaPredicted RBP15.99■□□□□ 0.15
TRAF3IP2-211ENST00000528599 MAP3K5Q99683 1374 aa15.99■□□□□ 0.15
TRAF3IP2-211ENST00000528599 GNAT3A8MTJ3 354 aa15.99■□□□□ 0.15
TRAF3IP2-211ENST00000528599 PDE3BQ13370 1112 aa15.99■□□□□ 0.15
TRAF3IP2-211ENST00000528599 C1orf141Q5JVX7 400 aa15.99■□□□□ 0.15
TRAF3IP2-211ENST00000528599 IFNL2Q8IZJ0 200 aa15.99■□□□□ 0.15
TRAF3IP2-211ENST00000528599 DCTN1Q14203 1278 aa15.98■□□□□ 0.15
TRAF3IP2-211ENST00000528599 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
TRAF3IP2-211ENST00000528599 TNS1Q9HBL0 1735 aaKnown RBP15.97■□□□□ 0.15
TRAF3IP2-211ENST00000528599 CCDC27Q2M243 656 aa15.97■□□□□ 0.15
TRAF3IP2-211ENST00000528599 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
TRAF3IP2-211ENST00000528599 WWC1Q8IX03 1113 aa15.97■□□□□ 0.15
TRAF3IP2-211ENST00000528599 NGEFQ8N5V2 710 aa15.97■□□□□ 0.15
TRAF3IP2-211ENST00000528599 SBF2Q86WG5 1849 aa15.96■□□□□ 0.15
TRAF3IP2-211ENST00000528599 HTATSF1O43719 755 aaKnown RBP15.96■□□□□ 0.15
TRAF3IP2-211ENST00000528599 MCM10Q7L590 875 aa15.96■□□□□ 0.15
TRAF3IP2-211ENST00000528599 IL17REQ8NFR9 667 aa15.96■□□□□ 0.15
TRAF3IP2-211ENST00000528599 THUMPD2Q9BTF0 503 aaKnown RBP15.96■□□□□ 0.15
TRAF3IP2-211ENST00000528599 LGR6Q9HBX8 967 aa15.96■□□□□ 0.15
TRAF3IP2-211ENST00000528599 LMOD3Q0VAK6 560 aa15.95■□□□□ 0.14
TRAF3IP2-211ENST00000528599 NKX1-1Q15270 411 aaPredicted RBP15.95■□□□□ 0.14
TRAF3IP2-211ENST00000528599 ZNF521Q96K83 1311 aa15.95■□□□□ 0.14
TRAF3IP2-211ENST00000528599 KDM6AO15550 1401 aaPredicted RBP15.95■□□□□ 0.14
TRAF3IP2-211ENST00000528599 PTF1AQ7RTS3 328 aa15.95■□□□□ 0.14
TRAF3IP2-211ENST00000528599 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
TRAF3IP2-211ENST00000528599 SRCAPQ6ZRS2 3230 aa15.94■□□□□ 0.14
TRAF3IP2-211ENST00000528599 RNMTO43148 476 aaKnown RBP15.94■□□□□ 0.14
TRAF3IP2-211ENST00000528599 FAM196AQ6ZSG2 479 aa15.94■□□□□ 0.14
TRAF3IP2-211ENST00000528599 ZBED9Q6R2W3 1325 aa15.94■□□□□ 0.14
TRAF3IP2-211ENST00000528599 ADAMTS7Q9UKP4 1686 aa15.93■□□□□ 0.14
TRAF3IP2-211ENST00000528599 HSP90AB1P08238 724 aaKnown RBP15.93■□□□□ 0.14
TRAF3IP2-211ENST00000528599 DCAF5Q96JK2 942 aa15.93■□□□□ 0.14
TRAF3IP2-211ENST00000528599 CEMIPQ8WUJ3 1361 aa15.93■□□□□ 0.14
TRAF3IP2-211ENST00000528599 TRIM37O94972 964 aa15.92■□□□□ 0.14
TRAF3IP2-211ENST00000528599 BCL9O00512 1426 aa15.92■□□□□ 0.14
TRAF3IP2-211ENST00000528599 DEFB132Q7Z7B7 95 aa15.92■□□□□ 0.14
TRAF3IP2-211ENST00000528599 SCN11AQ9UI33 1791 aa15.92■□□□□ 0.14
TRAF3IP2-211ENST00000528599 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
TRAF3IP2-211ENST00000528599 VIRMAQ69YN4 1812 aaKnown RBP15.91■□□□□ 0.14
TRAF3IP2-211ENST00000528599 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
TRAF3IP2-211ENST00000528599 SPINK5Q9NQ38 1064 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP2-211ENST00000528599 DOT1LQ8TEK3 1739 aa15.89■□□□□ 0.13
TRAF3IP2-211ENST00000528599 NHSQ6T4R5 1651 aa15.89■□□□□ 0.13
TRAF3IP2-211ENST00000528599 KCNQ2O43526 872 aa15.89■□□□□ 0.13
TRAF3IP2-211ENST00000528599 CDCA7LQ96GN5 454 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms