RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 PDE3BQ13370 1112 aa14□□□□□ -0.17
UBQLN1-204ENST00000527373 AEBP1Q8IUX7 1158 aa14□□□□□ -0.17
UBQLN1-204ENST00000527373 CDCA7Q9BWT1 371 aaPredicted RBP14□□□□□ -0.17
UBQLN1-204ENST00000527373 FAM208AQ9UK61 1670 aaKnown RBP14□□□□□ -0.17
UBQLN1-204ENST00000527373 IGSF1Q8N6C5 1336 aa13.99□□□□□ -0.17
UBQLN1-204ENST00000527373 EXOC5O00471 708 aa13.99□□□□□ -0.17
UBQLN1-204ENST00000527373 WDR43Q15061 677 aaKnown RBP eCLIP13.99□□□□□ -0.17
UBQLN1-204ENST00000527373 DDB1Q16531 1140 aa13.99□□□□□ -0.17
UBQLN1-204ENST00000527373 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
UBQLN1-204ENST00000527373 ONECUT3O60422 494 aaPredicted RBP13.98□□□□□ -0.17
UBQLN1-204ENST00000527373 CAPN15O75808 1086 aa13.98□□□□□ -0.17
UBQLN1-204ENST00000527373 COL3A1P02461 1466 aaPredicted RBP13.98□□□□□ -0.17
UBQLN1-204ENST00000527373 CCDC184Q52MB2 194 aa13.97□□□□□ -0.17
UBQLN1-204ENST00000527373 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
UBQLN1-204ENST00000527373 RGS12O14924 1447 aa13.97□□□□□ -0.17
UBQLN1-204ENST00000527373 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.17
UBQLN1-204ENST00000527373 ZCRB1Q8TBF4 217 aaKnown RBP13.96□□□□□ -0.17
UBQLN1-204ENST00000527373 NEFMP07197 916 aa13.95□□□□□ -0.18
UBQLN1-204ENST00000527373 PLEKHO1Q53GL0 409 aaPredicted RBP13.95□□□□□ -0.18
UBQLN1-204ENST00000527373 FAM182BQ5T319 152 aa13.95□□□□□ -0.18
UBQLN1-204ENST00000527373 ILDR2Q71H61 639 aa13.95□□□□□ -0.18
UBQLN1-204ENST00000527373 SPG7Q9UQ90 795 aa13.95□□□□□ -0.18
UBQLN1-204ENST00000527373 MEGF6O75095 1541 aa13.95□□□□□ -0.18
UBQLN1-204ENST00000527373 DISP2A7MBM2 1401 aa13.94□□□□□ -0.18
UBQLN1-204ENST00000527373 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
UBQLN1-204ENST00000527373 MIER1Q8N108 512 aa13.94□□□□□ -0.18
UBQLN1-204ENST00000527373 OVOS2A0A0G2JMS6 1433 aa13.92□□□□□ -0.18
UBQLN1-204ENST00000527373 FCHSD2O94868 740 aa13.92□□□□□ -0.18
UBQLN1-204ENST00000527373 RSPH6AQ9H0K4 717 aa13.92□□□□□ -0.18
UBQLN1-204ENST00000527373 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
UBQLN1-204ENST00000527373 BRWD3Q6RI45 1802 aa13.92□□□□□ -0.18
UBQLN1-204ENST00000527373 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 NCAPD2Q15021 1401 aa13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 KAT6BQ8WYB5 2073 aa13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 RGPD1P0DJD0 1748 aa13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 AMOTQ4VCS5 1084 aa13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 ZNF530Q6P9A1 599 aaPredicted RBP13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 MARCH10Q8NA82 808 aaPredicted RBP13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 ADAMTS8Q9UP79 889 aa13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 WNK3Q9BYP7 1800 aa13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 KDRP35968 1356 aa13.91□□□□□ -0.18
UBQLN1-204ENST00000527373 MAPK8IP3Q9UPT6 1336 aa13.9□□□□□ -0.18
UBQLN1-204ENST00000527373 TNS2Q63HR2 1409 aa13.9□□□□□ -0.18
UBQLN1-204ENST00000527373 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
UBQLN1-204ENST00000527373 C1orf141Q5JVX7 400 aa13.9□□□□□ -0.18
UBQLN1-204ENST00000527373 CCDC146Q8IYE0 955 aa13.9□□□□□ -0.18
UBQLN1-204ENST00000527373 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
UBQLN1-204ENST00000527373 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.19
UBQLN1-204ENST00000527373 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.19
UBQLN1-204ENST00000527373 FAM196AQ6ZSG2 479 aa13.89□□□□□ -0.19
UBQLN1-204ENST00000527373 IFNL2Q8IZJ0 200 aa13.89□□□□□ -0.19
UBQLN1-204ENST00000527373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.89□□□□□ -0.19
UBQLN1-204ENST00000527373 LRRC37A3O60309 1634 aa13.89□□□□□ -0.19
UBQLN1-204ENST00000527373 CCER2I3L3R5 266 aa13.88□□□□□ -0.19
UBQLN1-204ENST00000527373 CYP27B1O15528 508 aa13.88□□□□□ -0.19
UBQLN1-204ENST00000527373 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
UBQLN1-204ENST00000527373 PNISRQ8TF01 805 aaKnown RBP13.88□□□□□ -0.19
UBQLN1-204ENST00000527373 ACSBG1Q96GR2 724 aa13.88□□□□□ -0.19
UBQLN1-204ENST00000527373 PHACTR3Q96KR7 559 aa13.88□□□□□ -0.19
UBQLN1-204ENST00000527373 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
UBQLN1-204ENST00000527373 SYTL4Q96C24 671 aaPredicted RBP13.87□□□□□ -0.19
UBQLN1-204ENST00000527373 PHKG2P15735 406 aa13.86□□□□□ -0.19
UBQLN1-204ENST00000527373 RUNDC1Q96C34 613 aa13.86□□□□□ -0.19
UBQLN1-204ENST00000527373 TRIM37O94972 964 aa13.85□□□□□ -0.19
UBQLN1-204ENST00000527373 HSP90AB1P08238 724 aaKnown RBP13.85□□□□□ -0.19
UBQLN1-204ENST00000527373 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
UBQLN1-204ENST00000527373 AKAP4Q5JQC9 854 aa13.85□□□□□ -0.19
UBQLN1-204ENST00000527373 MPRIPQ6WCQ1 1025 aa13.85□□□□□ -0.19
UBQLN1-204ENST00000527373 PLEKHF1Q96S99 279 aa13.85□□□□□ -0.19
UBQLN1-204ENST00000527373 SENP3-EIF4A1A0A087X0R7 540 aa13.84□□□□□ -0.19
UBQLN1-204ENST00000527373 GNAT3A8MTJ3 354 aa13.83□□□□□ -0.2
UBQLN1-204ENST00000527373 PRIM1P49642 420 aaKnown RBP13.83□□□□□ -0.2
UBQLN1-204ENST00000527373 SF3B2Q13435 895 aaKnown RBP13.83□□□□□ -0.2
UBQLN1-204ENST00000527373 RTF1Q92541 710 aaKnown RBP13.83□□□□□ -0.2
UBQLN1-204ENST00000527373 RRP7AQ9Y3A4 280 aaKnown RBP13.83□□□□□ -0.2
UBQLN1-204ENST00000527373 PKD1L3Q7Z443 1732 aa13.83□□□□□ -0.2
UBQLN1-204ENST00000527373 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.2
UBQLN1-204ENST00000527373 KCNQ2O43526 872 aa13.82□□□□□ -0.2
UBQLN1-204ENST00000527373 RIPK4P57078 832 aa13.82□□□□□ -0.2
UBQLN1-204ENST00000527373 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
UBQLN1-204ENST00000527373 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
UBQLN1-204ENST00000527373 APAF1O14727 1248 aa13.81□□□□□ -0.2
UBQLN1-204ENST00000527373 CABP4P57796 275 aa13.81□□□□□ -0.2
UBQLN1-204ENST00000527373 NKX1-1Q15270 411 aaPredicted RBP13.81□□□□□ -0.2
UBQLN1-204ENST00000527373 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
UBQLN1-204ENST00000527373 MAP3K5Q99683 1374 aa13.81□□□□□ -0.2
UBQLN1-204ENST00000527373 RNMTO43148 476 aaKnown RBP13.8□□□□□ -0.2
UBQLN1-204ENST00000527373 TMPOP42166 694 aaKnown RBP13.8□□□□□ -0.2
UBQLN1-204ENST00000527373 LGR6Q9HBX8 967 aa13.8□□□□□ -0.2
UBQLN1-204ENST00000527373 SALL2Q9Y467 1007 aaPredicted RBP13.8□□□□□ -0.2
UBQLN1-204ENST00000527373 APBA3O96018 575 aa13.79□□□□□ -0.2
UBQLN1-204ENST00000527373 DCTN1Q14203 1278 aa13.79□□□□□ -0.2
UBQLN1-204ENST00000527373 MCM10Q7L590 875 aa13.79□□□□□ -0.2
UBQLN1-204ENST00000527373 PTF1AQ7RTS3 328 aa13.79□□□□□ -0.2
UBQLN1-204ENST00000527373 BCL11BQ9C0K0 894 aaPredicted RBP13.79□□□□□ -0.2
UBQLN1-204ENST00000527373 TMOD3Q9NYL9 352 aa13.79□□□□□ -0.2
UBQLN1-204ENST00000527373 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
UBQLN1-204ENST00000527373 TEFQ10587 303 aa13.78□□□□□ -0.2
UBQLN1-204ENST00000527373 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBQLN1-204ENST00000527373 LMOD3Q0VAK6 560 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms