RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 EMILIN1Q9Y6C2 1016 aa23.69■■□□□ 1.38
LTBP3-208ENST00000527339 RGPD2P0DJD1 1756 aa23.69■■□□□ 1.38
LTBP3-208ENST00000527339 INSRP06213 1382 aa23.68■■□□□ 1.38
LTBP3-208ENST00000527339 EXOC5O00471 708 aa23.68■■□□□ 1.38
LTBP3-208ENST00000527339 MORC1Q86VD1 984 aa23.68■■□□□ 1.38
LTBP3-208ENST00000527339 SMG6Q86US8 1419 aaKnown RBP23.67■■□□□ 1.38
LTBP3-208ENST00000527339 TNNT2P45379 298 aaPredicted RBP23.67■■□□□ 1.38
LTBP3-208ENST00000527339 LTV1Q96GA3 475 aaPredicted RBP23.67■■□□□ 1.38
LTBP3-208ENST00000527339 NPC1L1Q9UHC9 1359 aa23.66■■□□□ 1.38
LTBP3-208ENST00000527339 POLKQ9UBT6 870 aa23.66■■□□□ 1.38
LTBP3-208ENST00000527339 TNS2Q63HR2 1409 aa23.66■■□□□ 1.38
LTBP3-208ENST00000527339 SLC15A2Q16348 729 aa23.65■■□□□ 1.38
LTBP3-208ENST00000527339 HSP90AB2PQ58FF8 381 aa23.65■■□□□ 1.38
LTBP3-208ENST00000527339 ACSBG1Q96GR2 724 aa23.65■■□□□ 1.38
LTBP3-208ENST00000527339 SGIP1Q9BQI5 828 aa23.64■■□□□ 1.37
LTBP3-208ENST00000527339 PPM1GO15355 546 aaPredicted RBP23.63■■□□□ 1.37
LTBP3-208ENST00000527339 STK32BQ9NY57 414 aa23.63■■□□□ 1.37
LTBP3-208ENST00000527339 NHSQ6T4R5 1651 aa23.62■■□□□ 1.37
LTBP3-208ENST00000527339 GOLGB1Q14789 3259 aaKnown RBP23.62■■□□□ 1.37
LTBP3-208ENST00000527339 CC2D1BQ5T0F9 858 aaKnown RBP23.6■■□□□ 1.37
LTBP3-208ENST00000527339 FHDC1Q9C0D6 1143 aaPredicted RBP23.6■■□□□ 1.37
LTBP3-208ENST00000527339 PAPPAQ13219 1627 aa23.59■■□□□ 1.37
LTBP3-208ENST00000527339 IL2RBP14784 551 aa23.59■■□□□ 1.37
LTBP3-208ENST00000527339 SYT17Q9BSW7 474 aa23.59■■□□□ 1.37
LTBP3-208ENST00000527339 NBPF6Q5VWK0 638 aa23.57■■□□□ 1.36
LTBP3-208ENST00000527339 NBPF4Q96M43 638 aa23.57■■□□□ 1.36
LTBP3-208ENST00000527339 LRRC4BQ9NT99 713 aa23.57■■□□□ 1.36
LTBP3-208ENST00000527339 BTAF1O14981 1849 aa23.56■■□□□ 1.36
LTBP3-208ENST00000527339 DCAF8L1A6NGE4 600 aa23.56■■□□□ 1.36
LTBP3-208ENST00000527339 ZNF827Q17R98 1081 aa23.56■■□□□ 1.36
LTBP3-208ENST00000527339 MTFR1LQ9H019 292 aa23.56■■□□□ 1.36
LTBP3-208ENST00000527339 KAT6BQ8WYB5 2073 aa23.55■■□□□ 1.36
LTBP3-208ENST00000527339 NCAPD2Q15021 1401 aa23.53■■□□□ 1.36
LTBP3-208ENST00000527339 ZNF784Q8NCA9 323 aaPredicted RBP23.53■■□□□ 1.36
LTBP3-208ENST00000527339 MEGF6O75095 1541 aa23.51■■□□□ 1.35
LTBP3-208ENST00000527339 CNGB1Q14028 1251 aaPredicted RBP23.51■■□□□ 1.35
LTBP3-208ENST00000527339 EIF4A2Q14240 407 aaKnown RBP23.51■■□□□ 1.35
LTBP3-208ENST00000527339 USHBP1Q8N6Y0 703 aa23.51■■□□□ 1.35
LTBP3-208ENST00000527339 SHANK3Q9BYB0 1731 aa23.5■■□□□ 1.35
LTBP3-208ENST00000527339 MTHFSP49914 203 aa23.49■■□□□ 1.35
LTBP3-208ENST00000527339 RAPGEF4Q8WZA2 1011 aa23.49■■□□□ 1.35
LTBP3-208ENST00000527339 EYA1Q99502 592 aa23.49■■□□□ 1.35
LTBP3-208ENST00000527339 ARXQ96QS3 562 aa23.48■■□□□ 1.35
LTBP3-208ENST00000527339 KCNQ4P56696 695 aa23.47■■□□□ 1.35
LTBP3-208ENST00000527339 AKT1S1Q96B36 256 aa23.47■■□□□ 1.35
LTBP3-208ENST00000527339 TATP17735 454 aaPredicted RBP23.46■■□□□ 1.35
LTBP3-208ENST00000527339 DDX10Q13206 875 aaKnown RBP23.46■■□□□ 1.35
LTBP3-208ENST00000527339 PKD1L3Q7Z443 1732 aa23.45■■□□□ 1.34
LTBP3-208ENST00000527339 IGSF1Q8N6C5 1336 aa23.45■■□□□ 1.34
LTBP3-208ENST00000527339 DDX54Q8TDD1 881 aaKnown RBP23.45■■□□□ 1.34
LTBP3-208ENST00000527339 ZCRB1Q8TBF4 217 aaKnown RBP23.44■■□□□ 1.34
LTBP3-208ENST00000527339 CHD4Q14839 1912 aa23.43■■□□□ 1.34
LTBP3-208ENST00000527339 MAP3K5Q99683 1374 aa23.42■■□□□ 1.34
LTBP3-208ENST00000527339 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
LTBP3-208ENST00000527339 PNPLA7Q6ZV29 1317 aa23.41■■□□□ 1.34
LTBP3-208ENST00000527339 TUBGCP6Q96RT7 1819 aa23.41■■□□□ 1.34
LTBP3-208ENST00000527339 IL13P35225 146 aa23.41■■□□□ 1.34
LTBP3-208ENST00000527339 PRIM1P49642 420 aaKnown RBP23.4■■□□□ 1.34
LTBP3-208ENST00000527339 COL3A1P02461 1466 aaPredicted RBP23.4■■□□□ 1.34
LTBP3-208ENST00000527339 COL24A1Q17RW2 1714 aa23.39■■□□□ 1.33
LTBP3-208ENST00000527339 DIAPH1O60610 1272 aaKnown RBP23.38■■□□□ 1.33
LTBP3-208ENST00000527339 PPP2R1AP30153 589 aa23.38■■□□□ 1.33
LTBP3-208ENST00000527339 QSER1Q2KHR3 1735 aa23.38■■□□□ 1.33
LTBP3-208ENST00000527339 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
LTBP3-208ENST00000527339 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
LTBP3-208ENST00000527339 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
LTBP3-208ENST00000527339 SLC27A3Q5K4L6 730 aa23.37■■□□□ 1.33
LTBP3-208ENST00000527339 DOT1LQ8TEK3 1739 aa23.36■■□□□ 1.33
LTBP3-208ENST00000527339 SYTL4Q96C24 671 aaPredicted RBP23.36■■□□□ 1.33
LTBP3-208ENST00000527339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.36■■□□□ 1.33
LTBP3-208ENST00000527339 KDRP35968 1356 aa23.36■■□□□ 1.33
LTBP3-208ENST00000527339 CFAP53Q96M91 514 aa23.35■■□□□ 1.33
LTBP3-208ENST00000527339 SPG7Q9UQ90 795 aa23.35■■□□□ 1.33
LTBP3-208ENST00000527339 LY75O60449 1722 aa23.34■■□□□ 1.33
LTBP3-208ENST00000527339 NLGN2Q8NFZ4 835 aa23.34■■□□□ 1.33
LTBP3-208ENST00000527339 SULT6B1Q6IMI4 303 aa23.33■■□□□ 1.33
LTBP3-208ENST00000527339 SLC16A10Q8TF71 515 aa23.33■■□□□ 1.33
LTBP3-208ENST00000527339 CEP350Q5VT06 3117 aa23.33■■□□□ 1.32
LTBP3-208ENST00000527339 RALBP1Q15311 655 aa23.32■■□□□ 1.32
LTBP3-208ENST00000527339 GPR162Q16538 588 aa23.32■■□□□ 1.32
LTBP3-208ENST00000527339 AEBP1Q8IUX7 1158 aa23.32■■□□□ 1.32
LTBP3-208ENST00000527339 KLHL34Q8N239 644 aa23.32■■□□□ 1.32
LTBP3-208ENST00000527339 TFCP2L1Q9NZI6 479 aa23.32■■□□□ 1.32
LTBP3-208ENST00000527339 CYP27B1O15528 508 aa23.31■■□□□ 1.32
LTBP3-208ENST00000527339 C1QTNF8P60827 252 aa23.3■■□□□ 1.32
LTBP3-208ENST00000527339 AMOTQ4VCS5 1084 aa23.28■■□□□ 1.32
LTBP3-208ENST00000527339 PLEKHO1Q53GL0 409 aaPredicted RBP23.28■■□□□ 1.32
LTBP3-208ENST00000527339 TOGARAM1Q9Y4F4 1720 aa23.28■■□□□ 1.32
LTBP3-208ENST00000527339 ITGB4P16144 1822 aa23.27■■□□□ 1.32
LTBP3-208ENST00000527339 HMOX1P09601 288 aa23.27■■□□□ 1.32
LTBP3-208ENST00000527339 POLD1P28340 1107 aa23.27■■□□□ 1.32
LTBP3-208ENST00000527339 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.32
LTBP3-208ENST00000527339 IFNL2Q8IZJ0 200 aa23.27■■□□□ 1.32
LTBP3-208ENST00000527339 CCNL1Q9UK58 526 aaPredicted RBP23.27■■□□□ 1.32
LTBP3-208ENST00000527339 U2SURPO15042 1029 aaKnown RBP23.26■■□□□ 1.31
LTBP3-208ENST00000527339 YBX3P16989 372 aaKnown RBP eCLIP23.26■■□□□ 1.31
LTBP3-208ENST00000527339 NKX1-1Q15270 411 aaPredicted RBP23.26■■□□□ 1.31
LTBP3-208ENST00000527339 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
LTBP3-208ENST00000527339 NUDCQ9Y266 331 aa23.26■■□□□ 1.31
LTBP3-208ENST00000527339 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms