RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 TATP17735 454 aaPredicted RBP22.32■■□□□ 1.16
SMCO4-204ENST00000527149 CCDC184Q52MB2 194 aa22.32■■□□□ 1.16
SMCO4-204ENST00000527149 MARCH10Q8NA82 808 aaPredicted RBP22.32■■□□□ 1.16
SMCO4-204ENST00000527149 BCL9O00512 1426 aa22.31■■□□□ 1.16
SMCO4-204ENST00000527149 U2SURPO15042 1029 aaKnown RBP22.31■■□□□ 1.16
SMCO4-204ENST00000527149 SBF2Q86WG5 1849 aa22.31■■□□□ 1.16
SMCO4-204ENST00000527149 EXOC5O00471 708 aa22.3■■□□□ 1.16
SMCO4-204ENST00000527149 ZCRB1Q8TBF4 217 aaKnown RBP22.3■■□□□ 1.16
SMCO4-204ENST00000527149 RSPH6AQ9H0K4 717 aa22.3■■□□□ 1.16
SMCO4-204ENST00000527149 NUDCQ9Y266 331 aa22.3■■□□□ 1.16
SMCO4-204ENST00000527149 PDE3BQ13370 1112 aa22.29■■□□□ 1.16
SMCO4-204ENST00000527149 FAM182BQ5T319 152 aa22.29■■□□□ 1.16
SMCO4-204ENST00000527149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.29■■□□□ 1.16
SMCO4-204ENST00000527149 CYP27B1O15528 508 aa22.27■■□□□ 1.16
SMCO4-204ENST00000527149 U2AF1L5P0DN76 240 aaPredicted RBP22.27■■□□□ 1.16
SMCO4-204ENST00000527149 U2AF1Q01081 240 aaKnown RBP eCLIP22.27■■□□□ 1.16
SMCO4-204ENST00000527149 TOGARAM1Q9Y4F4 1720 aa22.27■■□□□ 1.16
SMCO4-204ENST00000527149 PCDH11XQ9BZA7 1347 aa22.26■■□□□ 1.15
SMCO4-204ENST00000527149 PCDH11YQ9BZA8 1340 aa22.26■■□□□ 1.15
SMCO4-204ENST00000527149 DOT1LQ8TEK3 1739 aa22.26■■□□□ 1.15
SMCO4-204ENST00000527149 TNS1Q9HBL0 1735 aaKnown RBP22.26■■□□□ 1.15
SMCO4-204ENST00000527149 DIEXFQ68CQ4 756 aaKnown RBP22.25■■□□□ 1.15
SMCO4-204ENST00000527149 NHSQ6T4R5 1651 aa22.25■■□□□ 1.15
SMCO4-204ENST00000527149 FCHSD2O94868 740 aa22.23■■□□□ 1.15
SMCO4-204ENST00000527149 PRKAR2BP31323 418 aa22.23■■□□□ 1.15
SMCO4-204ENST00000527149 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
SMCO4-204ENST00000527149 FAM196AQ6ZSG2 479 aa22.22■■□□□ 1.15
SMCO4-204ENST00000527149 DDX54Q8TDD1 881 aaKnown RBP22.22■■□□□ 1.15
SMCO4-204ENST00000527149 ADAMTS7Q9UKP4 1686 aa22.22■■□□□ 1.15
SMCO4-204ENST00000527149 AMOTQ4VCS5 1084 aa22.21■■□□□ 1.15
SMCO4-204ENST00000527149 PHKG2P15735 406 aa22.2■■□□□ 1.14
SMCO4-204ENST00000527149 PLEKHO1Q53GL0 409 aaPredicted RBP22.2■■□□□ 1.14
SMCO4-204ENST00000527149 PHACTR3Q96KR7 559 aa22.2■■□□□ 1.14
SMCO4-204ENST00000527149 PLEKHF1Q96S99 279 aa22.2■■□□□ 1.14
SMCO4-204ENST00000527149 VIRMAQ69YN4 1812 aaKnown RBP22.2■■□□□ 1.14
SMCO4-204ENST00000527149 NKX1-1Q15270 411 aaPredicted RBP22.19■■□□□ 1.14
SMCO4-204ENST00000527149 MTHFSDQ2M296 383 aaKnown RBP22.19■■□□□ 1.14
SMCO4-204ENST00000527149 MRS2Q9HD23 443 aa22.19■■□□□ 1.14
SMCO4-204ENST00000527149 KDM6AO15550 1401 aaPredicted RBP22.19■■□□□ 1.14
SMCO4-204ENST00000527149 ZNF530Q6P9A1 599 aaPredicted RBP22.18■■□□□ 1.14
SMCO4-204ENST00000527149 SCN11AQ9UI33 1791 aa22.17■■□□□ 1.14
SMCO4-204ENST00000527149 IFNL2Q8IZJ0 200 aa22.17■■□□□ 1.14
SMCO4-204ENST00000527149 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
SMCO4-204ENST00000527149 UPF1Q92900 1129 aaKnown RBP eCLIP22.17■■□□□ 1.14
SMCO4-204ENST00000527149 ADAMTS8Q9UP79 889 aa22.17■■□□□ 1.14
SMCO4-204ENST00000527149 ITGB4P16144 1822 aa22.17■■□□□ 1.14
SMCO4-204ENST00000527149 KAT6BQ8WYB5 2073 aa22.16■■□□□ 1.14
SMCO4-204ENST00000527149 WDR43Q15061 677 aaKnown RBP eCLIP22.16■■□□□ 1.14
SMCO4-204ENST00000527149 DLG5Q8TDM6 1919 aa22.16■■□□□ 1.14
SMCO4-204ENST00000527149 BTAF1O14981 1849 aa22.15■■□□□ 1.14
SMCO4-204ENST00000527149 PTF1AQ7RTS3 328 aa22.15■■□□□ 1.14
SMCO4-204ENST00000527149 MRC1P22897 1456 aa22.14■■□□□ 1.13
SMCO4-204ENST00000527149 KCNQ2O43526 872 aa22.13■■□□□ 1.13
SMCO4-204ENST00000527149 TRIM37O94972 964 aa22.13■■□□□ 1.13
SMCO4-204ENST00000527149 AKAP4Q5JQC9 854 aa22.13■■□□□ 1.13
SMCO4-204ENST00000527149 MAP3K5Q99683 1374 aa22.12■■□□□ 1.13
SMCO4-204ENST00000527149 SOCS7O14512 581 aa22.12■■□□□ 1.13
SMCO4-204ENST00000527149 GAS2L2Q8NHY3 880 aa22.12■■□□□ 1.13
SMCO4-204ENST00000527149 ACSBG1Q96GR2 724 aa22.12■■□□□ 1.13
SMCO4-204ENST00000527149 RGPD3A6NKT7 1758 aaPredicted RBP22.12■■□□□ 1.13
SMCO4-204ENST00000527149 RGPD4Q7Z3J3 1758 aa22.12■■□□□ 1.13
SMCO4-204ENST00000527149 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
SMCO4-204ENST00000527149 C1orf141Q5JVX7 400 aa22.11■■□□□ 1.13
SMCO4-204ENST00000527149 MIER1Q8N108 512 aa22.11■■□□□ 1.13
SMCO4-204ENST00000527149 BCL11BQ9C0K0 894 aaPredicted RBP22.11■■□□□ 1.13
SMCO4-204ENST00000527149 DCAF5Q96JK2 942 aa22.1■■□□□ 1.13
SMCO4-204ENST00000527149 HSP90AB1P08238 724 aaKnown RBP22.09■■□□□ 1.13
SMCO4-204ENST00000527149 PRIM1P49642 420 aaKnown RBP22.09■■□□□ 1.13
SMCO4-204ENST00000527149 CCDC146Q8IYE0 955 aa22.09■■□□□ 1.13
SMCO4-204ENST00000527149 SIPA1L3O60292 1781 aaPredicted RBP22.09■■□□□ 1.13
SMCO4-204ENST00000527149 MPRIPQ6WCQ1 1025 aa22.08■■□□□ 1.13
SMCO4-204ENST00000527149 PNNQ9H307 717 aaKnown RBP22.08■■□□□ 1.13
SMCO4-204ENST00000527149 MAPK8IP3Q9UPT6 1336 aa22.07■■□□□ 1.12
SMCO4-204ENST00000527149 CCDC125Q86Z20 511 aa22.07■■□□□ 1.12
SMCO4-204ENST00000527149 CEMIPQ8WUJ3 1361 aa22.07■■□□□ 1.12
SMCO4-204ENST00000527149 NFE2L2Q16236 605 aa22.06■■□□□ 1.12
SMCO4-204ENST00000527149 RUNDC1Q96C34 613 aa22.06■■□□□ 1.12
SMCO4-204ENST00000527149 PAPPAQ13219 1627 aa22.06■■□□□ 1.12
SMCO4-204ENST00000527149 RREB1Q92766 1687 aa22.05■■□□□ 1.12
SMCO4-204ENST00000527149 GNAT3A8MTJ3 354 aa22.05■■□□□ 1.12
SMCO4-204ENST00000527149 ERVV-2B6SEH9 535 aa22.05■■□□□ 1.12
SMCO4-204ENST00000527149 RNMTO43148 476 aaKnown RBP22.05■■□□□ 1.12
SMCO4-204ENST00000527149 LGR6Q9HBX8 967 aa22.05■■□□□ 1.12
SMCO4-204ENST00000527149 LY75O60449 1722 aa22.05■■□□□ 1.12
SMCO4-204ENST00000527149 IL17REQ8NFR9 667 aa22.04■■□□□ 1.12
SMCO4-204ENST00000527149 NEFMP07197 916 aa22.02■■□□□ 1.12
SMCO4-204ENST00000527149 TMPOP42166 694 aaKnown RBP22.02■■□□□ 1.12
SMCO4-204ENST00000527149 DEFB132Q7Z7B7 95 aa22.02■■□□□ 1.12
SMCO4-204ENST00000527149 PIGBQ92521 554 aa22.02■■□□□ 1.12
SMCO4-204ENST00000527149 SYTL4Q96C24 671 aaPredicted RBP22.02■■□□□ 1.12
SMCO4-204ENST00000527149 HTATSF1O43719 755 aaKnown RBP22■■□□□ 1.11
SMCO4-204ENST00000527149 APBA3O96018 575 aa22■■□□□ 1.11
SMCO4-204ENST00000527149 SLC52A2Q9HAB3 445 aa22■■□□□ 1.11
SMCO4-204ENST00000527149 TMOD3Q9NYL9 352 aa22■■□□□ 1.11
SMCO4-204ENST00000527149 CAMKK2Q96RR4 588 aa21.99■■□□□ 1.11
SMCO4-204ENST00000527149 RRP7AQ9Y3A4 280 aaKnown RBP21.99■■□□□ 1.11
SMCO4-204ENST00000527149 NUP188Q5SRE5 1749 aa21.99■■□□□ 1.11
SMCO4-204ENST00000527149 UBR2Q8IWV8 1755 aa21.98■■□□□ 1.11
SMCO4-204ENST00000527149 APAF1O14727 1248 aa21.98■■□□□ 1.11
SMCO4-204ENST00000527149 PLSCR1O15162 318 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms