RNA–Protein interactions for RNA: ENST00000526599.1

CHRNA10-203, Transcript of cholinergic receptor nicotinic alpha 10 subunit, humanhuman

TSL 1 (best)

Gene CHRNA10, Length 1,541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA10-203ENST00000526599 EYA1Q99502 592 aa25.68■■□□□ 1.7
CHRNA10-203ENST00000526599 MEGF6O75095 1541 aa25.68■■□□□ 1.7
CHRNA10-203ENST00000526599 RGPD1P0DJD0 1748 aa25.68■■□□□ 1.7
CHRNA10-203ENST00000526599 DEFB132Q7Z7B7 95 aa25.67■■□□□ 1.7
CHRNA10-203ENST00000526599 RAPGEF4Q8WZA2 1011 aa25.66■■□□□ 1.7
CHRNA10-203ENST00000526599 CFAP53Q96M91 514 aa25.66■■□□□ 1.7
CHRNA10-203ENST00000526599 YTHDC1Q96MU7 727 aaKnown RBP25.66■■□□□ 1.7
CHRNA10-203ENST00000526599 TNS1Q9HBL0 1735 aaKnown RBP25.65■■□□□ 1.7
CHRNA10-203ENST00000526599 DDX54Q8TDD1 881 aaKnown RBP25.64■■□□□ 1.7
CHRNA10-203ENST00000526599 NCAPD2Q15021 1401 aa25.64■■□□□ 1.69
CHRNA10-203ENST00000526599 TATP17735 454 aaPredicted RBP25.63■■□□□ 1.69
CHRNA10-203ENST00000526599 ZCRB1Q8TBF4 217 aaKnown RBP25.63■■□□□ 1.69
CHRNA10-203ENST00000526599 SBF2Q86WG5 1849 aa25.63■■□□□ 1.69
CHRNA10-203ENST00000526599 BCL9O00512 1426 aa25.61■■□□□ 1.69
CHRNA10-203ENST00000526599 BAG6P46379 1132 aa25.61■■□□□ 1.69
CHRNA10-203ENST00000526599 IGSF1Q8N6C5 1336 aa25.6■■□□□ 1.69
CHRNA10-203ENST00000526599 SHANK3Q9BYB0 1731 aa25.6■■□□□ 1.69
CHRNA10-203ENST00000526599 APBA3O96018 575 aa25.59■■□□□ 1.69
CHRNA10-203ENST00000526599 WDR43Q15061 677 aaKnown RBP eCLIP25.59■■□□□ 1.69
CHRNA10-203ENST00000526599 PTF1AQ7RTS3 328 aa25.59■■□□□ 1.69
CHRNA10-203ENST00000526599 IL13P35225 146 aa25.58■■□□□ 1.69
CHRNA10-203ENST00000526599 EN1Q05925 392 aaPredicted RBP25.58■■□□□ 1.69
CHRNA10-203ENST00000526599 ACSBG1Q96GR2 724 aa25.57■■□□□ 1.68
CHRNA10-203ENST00000526599 COL3A1P02461 1466 aaPredicted RBP25.56■■□□□ 1.68
CHRNA10-203ENST00000526599 BCL11BQ9C0K0 894 aaPredicted RBP25.56■■□□□ 1.68
CHRNA10-203ENST00000526599 KCNQ2O43526 872 aa25.55■■□□□ 1.68
CHRNA10-203ENST00000526599 ADAMTS8Q9UP79 889 aa25.54■■□□□ 1.68
CHRNA10-203ENST00000526599 AEBP1Q8IUX7 1158 aa25.53■■□□□ 1.68
CHRNA10-203ENST00000526599 KAT6BQ8WYB5 2073 aa25.53■■□□□ 1.68
CHRNA10-203ENST00000526599 DIAPH1O60610 1272 aaKnown RBP25.53■■□□□ 1.68
CHRNA10-203ENST00000526599 EZH2Q15910 746 aaKnown RBP25.53■■□□□ 1.68
CHRNA10-203ENST00000526599 NUDCQ9Y266 331 aa25.53■■□□□ 1.68
CHRNA10-203ENST00000526599 PKD1L3Q7Z443 1732 aa25.52■■□□□ 1.68
CHRNA10-203ENST00000526599 PCDH11XQ9BZA7 1347 aa25.52■■□□□ 1.68
CHRNA10-203ENST00000526599 PCDH11YQ9BZA8 1340 aa25.52■■□□□ 1.68
CHRNA10-203ENST00000526599 CAMKK2Q96RR4 588 aa25.52■■□□□ 1.68
CHRNA10-203ENST00000526599 CYP27B1O15528 508 aa25.51■■□□□ 1.67
CHRNA10-203ENST00000526599 SULT6B1Q6IMI4 303 aa25.51■■□□□ 1.67
CHRNA10-203ENST00000526599 NHSQ6T4R5 1651 aa25.51■■□□□ 1.67
CHRNA10-203ENST00000526599 SPG7Q9UQ90 795 aa25.5■■□□□ 1.67
CHRNA10-203ENST00000526599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.49■■□□□ 1.67
CHRNA10-203ENST00000526599 HNRNPUQ00839 825 aaKnown RBP eCLIP25.48■■□□□ 1.67
CHRNA10-203ENST00000526599 KDRP35968 1356 aa25.48■■□□□ 1.67
CHRNA10-203ENST00000526599 U2SURPO15042 1029 aaKnown RBP25.47■■□□□ 1.67
CHRNA10-203ENST00000526599 DOT1LQ8TEK3 1739 aa25.47■■□□□ 1.67
CHRNA10-203ENST00000526599 PLSCR1O15162 318 aa25.46■■□□□ 1.67
CHRNA10-203ENST00000526599 HMOX1P09601 288 aa25.46■■□□□ 1.67
CHRNA10-203ENST00000526599 U2AF1L5P0DN76 240 aaPredicted RBP25.46■■□□□ 1.67
CHRNA10-203ENST00000526599 PRIM1P49642 420 aaKnown RBP25.46■■□□□ 1.67
CHRNA10-203ENST00000526599 U2AF1Q01081 240 aaKnown RBP eCLIP25.46■■□□□ 1.67
CHRNA10-203ENST00000526599 SYTL4Q96C24 671 aaPredicted RBP25.45■■□□□ 1.66
CHRNA10-203ENST00000526599 PLEKHG2Q9H7P9 1386 aa25.44■■□□□ 1.66
CHRNA10-203ENST00000526599 BTAF1O14981 1849 aa25.44■■□□□ 1.66
CHRNA10-203ENST00000526599 PLEKHO1Q53GL0 409 aaPredicted RBP25.42■■□□□ 1.66
CHRNA10-203ENST00000526599 RREB1Q92766 1687 aa25.42■■□□□ 1.66
CHRNA10-203ENST00000526599 PHKG2P15735 406 aa25.42■■□□□ 1.66
CHRNA10-203ENST00000526599 IFNL2Q8IZJ0 200 aa25.42■■□□□ 1.66
CHRNA10-203ENST00000526599 RGPD3A6NKT7 1758 aaPredicted RBP25.41■■□□□ 1.66
CHRNA10-203ENST00000526599 RGPD4Q7Z3J3 1758 aa25.41■■□□□ 1.66
CHRNA10-203ENST00000526599 NKX1-1Q15270 411 aaPredicted RBP25.41■■□□□ 1.66
CHRNA10-203ENST00000526599 AMOTQ4VCS5 1084 aa25.4■■□□□ 1.66
CHRNA10-203ENST00000526599 PROM2Q8N271 834 aa25.4■■□□□ 1.66
CHRNA10-203ENST00000526599 CCDC146Q8IYE0 955 aa25.39■■□□□ 1.66
CHRNA10-203ENST00000526599 TOGARAM1Q9Y4F4 1720 aa25.39■■□□□ 1.65
CHRNA10-203ENST00000526599 ZNF530Q6P9A1 599 aaPredicted RBP25.38■■□□□ 1.65
CHRNA10-203ENST00000526599 NUP188Q5SRE5 1749 aa25.37■■□□□ 1.65
CHRNA10-203ENST00000526599 TXNRD1Q16881 649 aa25.36■■□□□ 1.65
CHRNA10-203ENST00000526599 RUNDC1Q96C34 613 aa25.36■■□□□ 1.65
CHRNA10-203ENST00000526599 SENP3-EIF4A1A0A087X0R7 540 aa25.35■■□□□ 1.65
CHRNA10-203ENST00000526599 FCHSD2O94868 740 aa25.35■■□□□ 1.65
CHRNA10-203ENST00000526599 MPRIPQ6WCQ1 1025 aa25.35■■□□□ 1.65
CHRNA10-203ENST00000526599 ITGB4P16144 1822 aa25.34■■□□□ 1.65
CHRNA10-203ENST00000526599 PNNQ9H307 717 aaKnown RBP25.33■■□□□ 1.65
CHRNA10-203ENST00000526599 ZBED9Q6R2W3 1325 aa25.33■■□□□ 1.64
CHRNA10-203ENST00000526599 C1orf141Q5JVX7 400 aa25.32■■□□□ 1.64
CHRNA10-203ENST00000526599 PSDA5PKW4 1024 aaPredicted RBP25.32■■□□□ 1.64
CHRNA10-203ENST00000526599 HSP90AB1P08238 724 aaKnown RBP25.32■■□□□ 1.64
CHRNA10-203ENST00000526599 RSPH6AQ9H0K4 717 aa25.32■■□□□ 1.64
CHRNA10-203ENST00000526599 DCAF5Q96JK2 942 aa25.31■■□□□ 1.64
CHRNA10-203ENST00000526599 PLEKHF1Q96S99 279 aa25.31■■□□□ 1.64
CHRNA10-203ENST00000526599 APAF1O14727 1248 aa25.3■■□□□ 1.64
CHRNA10-203ENST00000526599 CENPBP07199 599 aaPredicted RBP25.3■■□□□ 1.64
CHRNA10-203ENST00000526599 R3HDM1Q15032 1099 aaKnown RBP25.3■■□□□ 1.64
CHRNA10-203ENST00000526599 MTHFSDQ2M296 383 aaKnown RBP25.3■■□□□ 1.64
CHRNA10-203ENST00000526599 NBPF14Q5TI25 921 aa25.3■■□□□ 1.64
CHRNA10-203ENST00000526599 PIGBQ92521 554 aa25.3■■□□□ 1.64
CHRNA10-203ENST00000526599 PRKAR2BP31323 418 aa25.29■■□□□ 1.64
CHRNA10-203ENST00000526599 KDM6AO15550 1401 aaPredicted RBP25.28■■□□□ 1.64
CHRNA10-203ENST00000526599 AKAP4Q5JQC9 854 aa25.28■■□□□ 1.64
CHRNA10-203ENST00000526599 TMOD3Q9NYL9 352 aa25.28■■□□□ 1.64
CHRNA10-203ENST00000526599 SALL2Q9Y467 1007 aaPredicted RBP25.28■■□□□ 1.64
CHRNA10-203ENST00000526599 LRRC4BQ9NT99 713 aa25.27■■□□□ 1.64
CHRNA10-203ENST00000526599 MAPK8IP3Q9UPT6 1336 aa25.27■■□□□ 1.64
CHRNA10-203ENST00000526599 SRCAPQ6ZRS2 3230 aa25.27■■□□□ 1.64
CHRNA10-203ENST00000526599 ANO8Q9HCE9 1232 aaPredicted RBP25.27■■□□□ 1.64
CHRNA10-203ENST00000526599 LY75O60449 1722 aa25.26■■□□□ 1.63
CHRNA10-203ENST00000526599 ERVV-2B6SEH9 535 aa25.26■■□□□ 1.63
CHRNA10-203ENST00000526599 PHACTR3Q96KR7 559 aa25.26■■□□□ 1.63
CHRNA10-203ENST00000526599 NEFMP07197 916 aa25.25■■□□□ 1.63
CHRNA10-203ENST00000526599 KCNQ4P56696 695 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms