RNA–Protein interactions for RNA: ENST00000525653.1

HHLA3-206, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 3

Gene HHLA3, Length 689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-206ENST00000525653 HMGB2P26583 209 aaKnown RBP12.42□□□□□ -0.42
HHLA3-206ENST00000525653 HOXC9P31274 260 aa12.42□□□□□ -0.42
HHLA3-206ENST00000525653 SLC27A3Q5K4L6 730 aa12.41□□□□□ -0.42
HHLA3-206ENST00000525653 ACSBG1Q96GR2 724 aa12.41□□□□□ -0.42
HHLA3-206ENST00000525653 MTFR1LQ9H019 292 aa12.41□□□□□ -0.42
HHLA3-206ENST00000525653 DOT1LQ8TEK3 1739 aa12.4□□□□□ -0.42
HHLA3-206ENST00000525653 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.42
HHLA3-206ENST00000525653 LTV1Q96GA3 475 aaPredicted RBP12.4□□□□□ -0.42
HHLA3-206ENST00000525653 LY75O60449 1722 aa12.4□□□□□ -0.43
HHLA3-206ENST00000525653 MYOM1P52179 1685 aa12.39□□□□□ -0.43
HHLA3-206ENST00000525653 FYB1O15117 783 aa12.39□□□□□ -0.43
HHLA3-206ENST00000525653 CHD4Q14839 1912 aa12.39□□□□□ -0.43
HHLA3-206ENST00000525653 ZCRB1Q8TBF4 217 aaKnown RBP12.38□□□□□ -0.43
HHLA3-206ENST00000525653 DDX54Q8TDD1 881 aaKnown RBP12.38□□□□□ -0.43
HHLA3-206ENST00000525653 SLC16A10Q8TF71 515 aa12.38□□□□□ -0.43
HHLA3-206ENST00000525653 FLT4P35916 1363 aa12.38□□□□□ -0.43
HHLA3-206ENST00000525653 ZBTB7AO95365 584 aa12.37□□□□□ -0.43
HHLA3-206ENST00000525653 PTGER2P43116 358 aa12.37□□□□□ -0.43
HHLA3-206ENST00000525653 RAPGEF4Q8WZA2 1011 aa12.37□□□□□ -0.43
HHLA3-206ENST00000525653 INSRP06213 1382 aa12.37□□□□□ -0.43
HHLA3-206ENST00000525653 MAP3K5Q99683 1374 aa12.36□□□□□ -0.43
HHLA3-206ENST00000525653 YY1P25490 414 aa12.36□□□□□ -0.43
HHLA3-206ENST00000525653 GGNBP2Q9H3C7 697 aa12.36□□□□□ -0.43
HHLA3-206ENST00000525653 MAP2P11137 1827 aaKnown RBP12.36□□□□□ -0.43
HHLA3-206ENST00000525653 COL24A1Q17RW2 1714 aa12.36□□□□□ -0.43
HHLA3-206ENST00000525653 ANKRD26Q9UPS8 1709 aa12.36□□□□□ -0.43
HHLA3-206ENST00000525653 MEGF6O75095 1541 aa12.36□□□□□ -0.43
HHLA3-206ENST00000525653 RRS1Q15050 365 aaKnown RBP12.35□□□□□ -0.43
HHLA3-206ENST00000525653 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
HHLA3-206ENST00000525653 PDGFDQ9GZP0 370 aaPredicted RBP12.35□□□□□ -0.43
HHLA3-206ENST00000525653 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
HHLA3-206ENST00000525653 TUBGCP6Q96RT7 1819 aa12.34□□□□□ -0.43
HHLA3-206ENST00000525653 TATP17735 454 aaPredicted RBP12.34□□□□□ -0.43
HHLA3-206ENST00000525653 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
HHLA3-206ENST00000525653 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
HHLA3-206ENST00000525653 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
HHLA3-206ENST00000525653 PCDH11XQ9BZA7 1347 aa12.34□□□□□ -0.43
HHLA3-206ENST00000525653 PCDH11YQ9BZA8 1340 aa12.34□□□□□ -0.43
HHLA3-206ENST00000525653 NSD2O96028 1365 aa12.33□□□□□ -0.44
HHLA3-206ENST00000525653 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
HHLA3-206ENST00000525653 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
HHLA3-206ENST00000525653 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
HHLA3-206ENST00000525653 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
HHLA3-206ENST00000525653 PKD1L3Q7Z443 1732 aa12.33□□□□□ -0.44
HHLA3-206ENST00000525653 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
HHLA3-206ENST00000525653 FBLN1P23142 703 aa12.32□□□□□ -0.44
HHLA3-206ENST00000525653 ZNF827Q17R98 1081 aa12.32□□□□□ -0.44
HHLA3-206ENST00000525653 ARXQ96QS3 562 aa12.32□□□□□ -0.44
HHLA3-206ENST00000525653 SYT17Q9BSW7 474 aa12.32□□□□□ -0.44
HHLA3-206ENST00000525653 FHDC1Q9C0D6 1143 aaPredicted RBP12.32□□□□□ -0.44
HHLA3-206ENST00000525653 ITGB4P16144 1822 aa12.32□□□□□ -0.44
HHLA3-206ENST00000525653 NCAPD2Q15021 1401 aa12.31□□□□□ -0.44
HHLA3-206ENST00000525653 POLD1P28340 1107 aa12.31□□□□□ -0.44
HHLA3-206ENST00000525653 HSP90AB2PQ58FF8 381 aa12.31□□□□□ -0.44
HHLA3-206ENST00000525653 TAF1LQ8IZX4 1826 aa12.31□□□□□ -0.44
HHLA3-206ENST00000525653 C5P01031 1676 aa12.3□□□□□ -0.44
HHLA3-206ENST00000525653 CARD14Q9BXL6 1004 aa12.3□□□□□ -0.44
HHLA3-206ENST00000525653 TFCP2L1Q9NZI6 479 aa12.3□□□□□ -0.44
HHLA3-206ENST00000525653 CCNL1Q9UK58 526 aaPredicted RBP12.3□□□□□ -0.44
HHLA3-206ENST00000525653 WASHC2AQ641Q2 1341 aa12.29□□□□□ -0.44
HHLA3-206ENST00000525653 PNPLA7Q6ZV29 1317 aa12.29□□□□□ -0.44
HHLA3-206ENST00000525653 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
HHLA3-206ENST00000525653 FLAD1Q8NFF5 587 aa12.28□□□□□ -0.44
HHLA3-206ENST00000525653 SMARCC1Q92922 1105 aaPredicted RBP12.28□□□□□ -0.44
HHLA3-206ENST00000525653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.28□□□□□ -0.44
HHLA3-206ENST00000525653 EIF4G2P78344 907 aaKnown RBP eCLIP12.27□□□□□ -0.45
HHLA3-206ENST00000525653 SPG7Q9UQ90 795 aa12.27□□□□□ -0.45
HHLA3-206ENST00000525653 EMILIN1Q9Y6C2 1016 aa12.27□□□□□ -0.45
HHLA3-206ENST00000525653 TOGARAM1Q9Y4F4 1720 aa12.26□□□□□ -0.45
HHLA3-206ENST00000525653 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
HHLA3-206ENST00000525653 PCGF6Q9BYE7 350 aa12.26□□□□□ -0.45
HHLA3-206ENST00000525653 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
HHLA3-206ENST00000525653 PPM1GO15355 546 aaPredicted RBP12.25□□□□□ -0.45
HHLA3-206ENST00000525653 CYP27B1O15528 508 aa12.25□□□□□ -0.45
HHLA3-206ENST00000525653 CAPN15O75808 1086 aa12.24□□□□□ -0.45
HHLA3-206ENST00000525653 UBR3Q6ZT12 1888 aa12.24□□□□□ -0.45
HHLA3-206ENST00000525653 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
HHLA3-206ENST00000525653 KCNQ4P56696 695 aa12.23□□□□□ -0.45
HHLA3-206ENST00000525653 MPRIPQ6WCQ1 1025 aa12.23□□□□□ -0.45
HHLA3-206ENST00000525653 EYA1Q99502 592 aa12.23□□□□□ -0.45
HHLA3-206ENST00000525653 POLKQ9UBT6 870 aa12.23□□□□□ -0.45
HHLA3-206ENST00000525653 GPR162Q16538 588 aa12.22□□□□□ -0.45
HHLA3-206ENST00000525653 IFNL2Q8IZJ0 200 aa12.22□□□□□ -0.45
HHLA3-206ENST00000525653 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
HHLA3-206ENST00000525653 COL23A1Q86Y22 540 aaPredicted RBP12.21□□□□□ -0.45
HHLA3-206ENST00000525653 POLR3GLQ9BT43 218 aa12.21□□□□□ -0.45
HHLA3-206ENST00000525653 ZNF831Q5JPB2 1677 aa12.21□□□□□ -0.45
HHLA3-206ENST00000525653 HSP90AB1P08238 724 aaKnown RBP12.2□□□□□ -0.46
HHLA3-206ENST00000525653 HSPA5P11021 654 aaKnown RBP12.2□□□□□ -0.46
HHLA3-206ENST00000525653 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
HHLA3-206ENST00000525653 ZNF784Q8NCA9 323 aaPredicted RBP12.2□□□□□ -0.46
HHLA3-206ENST00000525653 PIGBQ92521 554 aa12.2□□□□□ -0.46
HHLA3-206ENST00000525653 AK7Q96M32 723 aa12.2□□□□□ -0.46
HHLA3-206ENST00000525653 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
HHLA3-206ENST00000525653 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
HHLA3-206ENST00000525653 GRIN3BO60391 1043 aa12.19□□□□□ -0.46
HHLA3-206ENST00000525653 PHKG2P15735 406 aa12.19□□□□□ -0.46
HHLA3-206ENST00000525653 SSFA2P28290 1259 aa12.19□□□□□ -0.46
HHLA3-206ENST00000525653 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
HHLA3-206ENST00000525653 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms