RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 FLT4P35916 1363 aa17.55■□□□□ 0.4
CLP1-202ENST00000525602 RGPD2P0DJD1 1756 aa17.54■□□□□ 0.4
CLP1-202ENST00000525602 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
CLP1-202ENST00000525602 INSRP06213 1382 aa17.53■□□□□ 0.4
CLP1-202ENST00000525602 EXOC5O00471 708 aa17.53■□□□□ 0.4
CLP1-202ENST00000525602 EMILIN1Q9Y6C2 1016 aa17.53■□□□□ 0.4
CLP1-202ENST00000525602 WASHC2AQ641Q2 1341 aa17.52■□□□□ 0.4
CLP1-202ENST00000525602 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.4
CLP1-202ENST00000525602 MAP2P11137 1827 aaKnown RBP17.52■□□□□ 0.39
CLP1-202ENST00000525602 STK32BQ9NY57 414 aa17.52■□□□□ 0.39
CLP1-202ENST00000525602 IL2RBP14784 551 aa17.51■□□□□ 0.39
CLP1-202ENST00000525602 SLC15A2Q16348 729 aa17.51■□□□□ 0.39
CLP1-202ENST00000525602 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
CLP1-202ENST00000525602 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
CLP1-202ENST00000525602 TUBGCP6Q96RT7 1819 aa17.49■□□□□ 0.39
CLP1-202ENST00000525602 FHDC1Q9C0D6 1143 aaPredicted RBP17.49■□□□□ 0.39
CLP1-202ENST00000525602 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
CLP1-202ENST00000525602 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
CLP1-202ENST00000525602 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
CLP1-202ENST00000525602 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
CLP1-202ENST00000525602 ZNF827Q17R98 1081 aa17.47■□□□□ 0.39
CLP1-202ENST00000525602 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
CLP1-202ENST00000525602 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
CLP1-202ENST00000525602 MEGF6O75095 1541 aa17.47■□□□□ 0.39
CLP1-202ENST00000525602 NBPF6Q5VWK0 638 aa17.46■□□□□ 0.39
CLP1-202ENST00000525602 NBPF4Q96M43 638 aa17.46■□□□□ 0.39
CLP1-202ENST00000525602 DOT1LQ8TEK3 1739 aa17.46■□□□□ 0.39
CLP1-202ENST00000525602 SHANK3Q9BYB0 1731 aa17.46■□□□□ 0.39
CLP1-202ENST00000525602 MORC1Q86VD1 984 aa17.45■□□□□ 0.38
CLP1-202ENST00000525602 USHBP1Q8N6Y0 703 aa17.45■□□□□ 0.38
CLP1-202ENST00000525602 CHD4Q14839 1912 aa17.45■□□□□ 0.38
CLP1-202ENST00000525602 PER1O15534 1290 aaPredicted RBP17.44■□□□□ 0.38
CLP1-202ENST00000525602 SYT17Q9BSW7 474 aa17.44■□□□□ 0.38
CLP1-202ENST00000525602 MTFR1LQ9H019 292 aa17.44■□□□□ 0.38
CLP1-202ENST00000525602 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
CLP1-202ENST00000525602 NCAPD2Q15021 1401 aa17.44■□□□□ 0.38
CLP1-202ENST00000525602 QSER1Q2KHR3 1735 aa17.42■□□□□ 0.38
CLP1-202ENST00000525602 KCNQ4P56696 695 aa17.41■□□□□ 0.38
CLP1-202ENST00000525602 ZNF784Q8NCA9 323 aaPredicted RBP17.41■□□□□ 0.38
CLP1-202ENST00000525602 EIF4A2Q14240 407 aaKnown RBP17.4■□□□□ 0.38
CLP1-202ENST00000525602 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
CLP1-202ENST00000525602 NPC1L1Q9UHC9 1359 aa17.39■□□□□ 0.38
CLP1-202ENST00000525602 LY75O60449 1722 aa17.39■□□□□ 0.37
CLP1-202ENST00000525602 COL24A1Q17RW2 1714 aa17.39■□□□□ 0.37
CLP1-202ENST00000525602 CC2D1BQ5T0F9 858 aaKnown RBP17.39■□□□□ 0.37
CLP1-202ENST00000525602 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
CLP1-202ENST00000525602 DDX54Q8TDD1 881 aaKnown RBP17.39■□□□□ 0.37
CLP1-202ENST00000525602 ARXQ96QS3 562 aa17.39■□□□□ 0.37
CLP1-202ENST00000525602 PKD1L3Q7Z443 1732 aa17.38■□□□□ 0.37
CLP1-202ENST00000525602 TATP17735 454 aaPredicted RBP17.38■□□□□ 0.37
CLP1-202ENST00000525602 EYA1Q99502 592 aa17.38■□□□□ 0.37
CLP1-202ENST00000525602 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
CLP1-202ENST00000525602 AKT1S1Q96B36 256 aa17.37■□□□□ 0.37
CLP1-202ENST00000525602 PNPLA7Q6ZV29 1317 aa17.35■□□□□ 0.37
CLP1-202ENST00000525602 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
CLP1-202ENST00000525602 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
CLP1-202ENST00000525602 MAP3K5Q99683 1374 aa17.34■□□□□ 0.37
CLP1-202ENST00000525602 CEP350Q5VT06 3117 aa17.34■□□□□ 0.37
CLP1-202ENST00000525602 PCDH11XQ9BZA7 1347 aa17.34■□□□□ 0.37
CLP1-202ENST00000525602 PCDH11YQ9BZA8 1340 aa17.34■□□□□ 0.37
CLP1-202ENST00000525602 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
CLP1-202ENST00000525602 CNGB1Q14028 1251 aaPredicted RBP17.32■□□□□ 0.36
CLP1-202ENST00000525602 MTHFSP49914 203 aa17.31■□□□□ 0.36
CLP1-202ENST00000525602 NLGN2Q8NFZ4 835 aa17.31■□□□□ 0.36
CLP1-202ENST00000525602 PELP1Q8IZL8 1130 aaKnown RBP17.3■□□□□ 0.36
CLP1-202ENST00000525602 PLEKHG2Q9H7P9 1386 aa17.3■□□□□ 0.36
CLP1-202ENST00000525602 IL13P35225 146 aa17.29■□□□□ 0.36
CLP1-202ENST00000525602 GPR162Q16538 588 aa17.29■□□□□ 0.36
CLP1-202ENST00000525602 SLC27A3Q5K4L6 730 aa17.29■□□□□ 0.36
CLP1-202ENST00000525602 TFCP2L1Q9NZI6 479 aa17.29■□□□□ 0.36
CLP1-202ENST00000525602 C5P01031 1676 aa17.29■□□□□ 0.36
CLP1-202ENST00000525602 TOGARAM1Q9Y4F4 1720 aa17.29■□□□□ 0.36
CLP1-202ENST00000525602 CYP27B1O15528 508 aa17.28■□□□□ 0.36
CLP1-202ENST00000525602 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
CLP1-202ENST00000525602 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
CLP1-202ENST00000525602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.36
CLP1-202ENST00000525602 AEBP1Q8IUX7 1158 aa17.27■□□□□ 0.35
CLP1-202ENST00000525602 KDRP35968 1356 aa17.27■□□□□ 0.35
CLP1-202ENST00000525602 TAF1LQ8IZX4 1826 aa17.26■□□□□ 0.35
CLP1-202ENST00000525602 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
CLP1-202ENST00000525602 POLD1P28340 1107 aa17.26■□□□□ 0.35
CLP1-202ENST00000525602 ZEB1P37275 1124 aaPredicted RBP17.26■□□□□ 0.35
CLP1-202ENST00000525602 MSL1Q68DK7 614 aa17.26■□□□□ 0.35
CLP1-202ENST00000525602 CCNL1Q9UK58 526 aaPredicted RBP17.26■□□□□ 0.35
CLP1-202ENST00000525602 SULT6B1Q6IMI4 303 aa17.25■□□□□ 0.35
CLP1-202ENST00000525602 ITGB4P16144 1822 aa17.25■□□□□ 0.35
CLP1-202ENST00000525602 SLC16A10Q8TF71 515 aa17.24■□□□□ 0.35
CLP1-202ENST00000525602 MSH5O43196 834 aa17.23■□□□□ 0.35
CLP1-202ENST00000525602 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
CLP1-202ENST00000525602 PHKG2P15735 406 aa17.23■□□□□ 0.35
CLP1-202ENST00000525602 YBX3P16989 372 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLP1-202ENST00000525602 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
CLP1-202ENST00000525602 NKX1-1Q15270 411 aaPredicted RBP17.23■□□□□ 0.35
CLP1-202ENST00000525602 COL23A1Q86Y22 540 aaPredicted RBP17.23■□□□□ 0.35
CLP1-202ENST00000525602 IFNL2Q8IZJ0 200 aa17.23■□□□□ 0.35
CLP1-202ENST00000525602 PLEKHO1Q53GL0 409 aaPredicted RBP17.21■□□□□ 0.35
CLP1-202ENST00000525602 PPP2R1AP30153 589 aa17.2■□□□□ 0.34
CLP1-202ENST00000525602 AMOTQ4VCS5 1084 aa17.2■□□□□ 0.34
CLP1-202ENST00000525602 C4BP0C0L5 1744 aa17.2■□□□□ 0.34
CLP1-202ENST00000525602 MPRIPQ6WCQ1 1025 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms