RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
ATM-208ENST00000525537 PCDHB3Q9Y5E6 796 aa9.54□□□□□ -0.88
ATM-208ENST00000525537 FAM187AA6NFU0 413 aa9.53□□□□□ -0.88
ATM-208ENST00000525537 ARHGAP9Q9BRR9 750 aa9.53□□□□□ -0.88
ATM-208ENST00000525537 EGFL7Q9UHF1 273 aa9.53□□□□□ -0.88
ATM-208ENST00000525537 DKK1O94907 266 aa9.52□□□□□ -0.89
ATM-208ENST00000525537 USP35Q9P2H5 1018 aa9.52□□□□□ -0.89
ATM-208ENST00000525537 ST8SIA5O15466 376 aa9.51□□□□□ -0.89
ATM-208ENST00000525537 SCNN1AP37088 669 aa9.51□□□□□ -0.89
ATM-208ENST00000525537 MMP16P51512 607 aa9.51□□□□□ -0.89
ATM-208ENST00000525537 TSGA10IPQ3SY00 556 aa9.51□□□□□ -0.89
ATM-208ENST00000525537 TAS1R3Q7RTX0 852 aa9.51□□□□□ -0.89
ATM-208ENST00000525537 NPAS4Q8IUM7 802 aa9.51□□□□□ -0.89
ATM-208ENST00000525537 AAASQ9NRG9 546 aa9.51□□□□□ -0.89
ATM-208ENST00000525537 CXXC1Q9P0U4 656 aaPredicted RBP9.51□□□□□ -0.89
ATM-208ENST00000525537 ANKRD33BA6NCL7 494 aa9.5□□□□□ -0.89
ATM-208ENST00000525537 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
ATM-208ENST00000525537 GDF9O60383 454 aa9.5□□□□□ -0.89
ATM-208ENST00000525537 SEC13P55735 322 aa9.5□□□□□ -0.89
ATM-208ENST00000525537 ZBTB33Q86T24 672 aa9.5□□□□□ -0.89
ATM-208ENST00000525537 GIPC2Q8TF65 315 aa9.5□□□□□ -0.89
ATM-208ENST00000525537 STK17AQ9UEE5 414 aa9.5□□□□□ -0.89
ATM-208ENST00000525537 DOLKQ9UPQ8 538 aa9.5□□□□□ -0.89
ATM-208ENST00000525537 KIAA1024Q9UPX6 916 aa9.5□□□□□ -0.89
ATM-208ENST00000525537 PRMT3O60678 531 aa9.49□□□□□ -0.89
ATM-208ENST00000525537 OCLNQ16625 522 aa9.49□□□□□ -0.89
ATM-208ENST00000525537 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
ATM-208ENST00000525537 SH3BP5LQ7L8J4 393 aa9.49□□□□□ -0.89
ATM-208ENST00000525537 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
ATM-208ENST00000525537 GTF2IP78347 998 aa9.48□□□□□ -0.89
ATM-208ENST00000525537 DZIP3Q86Y13 1208 aaKnown RBP9.48□□□□□ -0.89
ATM-208ENST00000525537 CCDC85AQ96PX6 553 aaPredicted RBP9.48□□□□□ -0.89
ATM-208ENST00000525537 RBM19Q9Y4C8 960 aaKnown RBP9.48□□□□□ -0.89
ATM-208ENST00000525537 TNFRSF10AO00220 468 aa9.47□□□□□ -0.89
ATM-208ENST00000525537 ZNF326Q5BKZ1 582 aaKnown RBP9.47□□□□□ -0.89
ATM-208ENST00000525537 LIAT1Q6ZQX7 453 aa9.47□□□□□ -0.89
ATM-208ENST00000525537 ANKLE1Q8NAG6 615 aa9.47□□□□□ -0.89
ATM-208ENST00000525537 SPSB2Q99619 263 aa9.47□□□□□ -0.89
ATM-208ENST00000525537 ICMTO60725 284 aa9.46□□□□□ -0.9
ATM-208ENST00000525537 WFS1O76024 890 aa9.46□□□□□ -0.9
ATM-208ENST00000525537 ABL1P00519 1130 aa9.46□□□□□ -0.9
ATM-208ENST00000525537 OXLD1Q5BKU9 147 aa9.46□□□□□ -0.9
ATM-208ENST00000525537 CCDC102BQ68D86 513 aa9.46□□□□□ -0.9
ATM-208ENST00000525537 H3BRB1 525 aa9.45□□□□□ -0.9
ATM-208ENST00000525537 TCF3P15923 654 aa9.45□□□□□ -0.9
ATM-208ENST00000525537 VAMP1P23763 118 aa9.45□□□□□ -0.9
ATM-208ENST00000525537 PRIMPOLQ96LW4 560 aa9.45□□□□□ -0.9
ATM-208ENST00000525537 UNC93B1Q9H1C4 597 aa9.45□□□□□ -0.9
ATM-208ENST00000525537 TUT1Q9H6E5 874 aaKnown RBP9.45□□□□□ -0.9
ATM-208ENST00000525537 ZNF211Q13398 564 aaPredicted RBP9.44□□□□□ -0.9
ATM-208ENST00000525537 RNF20Q5VTR2 975 aa9.44□□□□□ -0.9
ATM-208ENST00000525537 SH3RF1Q7Z6J0 888 aa9.44□□□□□ -0.9
ATM-208ENST00000525537 GLYCTKQ8IVS8 523 aa9.44□□□□□ -0.9
ATM-208ENST00000525537 TPCN2Q8NHX9 752 aa9.44□□□□□ -0.9
ATM-208ENST00000525537 PRDM9Q9NQV7 894 aa9.44□□□□□ -0.9
ATM-208ENST00000525537 SFI1A8K8P3 1242 aa9.43□□□□□ -0.9
ATM-208ENST00000525537 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
ATM-208ENST00000525537 GIGYF1O75420 1035 aaPredicted RBP9.43□□□□□ -0.9
ATM-208ENST00000525537 PCDHGA11Q9Y5H2 935 aa9.43□□□□□ -0.9
ATM-208ENST00000525537 WIPF1O43516 503 aa9.42□□□□□ -0.9
ATM-208ENST00000525537 C21orf2O43822 256 aa9.42□□□□□ -0.9
ATM-208ENST00000525537 TLL1O43897 1013 aa9.42□□□□□ -0.9
ATM-208ENST00000525537 FBXO33Q7Z6M2 555 aa9.42□□□□□ -0.9
ATM-208ENST00000525537 LOC100996750A0A140TA64 210 aa9.41□□□□□ -0.9
ATM-208ENST00000525537 PSME1Q06323 249 aa9.41□□□□□ -0.9
ATM-208ENST00000525537 ASB16Q96NS5 453 aa9.41□□□□□ -0.9
ATM-208ENST00000525537 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
ATM-208ENST00000525537 KRTAP4-6Q9BYQ5 205 aa9.41□□□□□ -0.9
ATM-208ENST00000525537 ANO2Q9NQ90 1003 aa9.41□□□□□ -0.9
ATM-208ENST00000525537 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
ATM-208ENST00000525537 MAGEB6P1A0A0J9YX57 407 aa9.4□□□□□ -0.9
ATM-208ENST00000525537 S1PR4O95977 384 aa9.4□□□□□ -0.9
ATM-208ENST00000525537 MAPK1P28482 360 aa9.4□□□□□ -0.9
ATM-208ENST00000525537 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
ATM-208ENST00000525537 USP4Q13107 963 aa9.4□□□□□ -0.9
ATM-208ENST00000525537 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.9
ATM-208ENST00000525537 CRIPAKQ8N1N5 446 aa9.4□□□□□ -0.9
ATM-208ENST00000525537 GTF3C2Q8WUA4 911 aaPredicted RBP9.4□□□□□ -0.9
ATM-208ENST00000525537 DACH1Q9UI36 760 aa9.4□□□□□ -0.9
ATM-208ENST00000525537 INSM1Q01101 510 aaPredicted RBP9.39□□□□□ -0.91
ATM-208ENST00000525537 FKBP4Q02790 459 aaKnown RBP eCLIP9.39□□□□□ -0.91
ATM-208ENST00000525537 SF3B2Q13435 895 aaKnown RBP9.39□□□□□ -0.91
ATM-208ENST00000525537 COL19A1Q14993 1142 aa9.39□□□□□ -0.91
ATM-208ENST00000525537 ECM1Q16610 540 aa9.39□□□□□ -0.91
ATM-208ENST00000525537 ERFEQ4G0M1 354 aa9.39□□□□□ -0.91
ATM-208ENST00000525537 BPHLQ86WA6 291 aaPredicted RBP9.39□□□□□ -0.91
ATM-208ENST00000525537 CCDC125Q86Z20 511 aa9.39□□□□□ -0.91
ATM-208ENST00000525537 ZSCAN29Q8IWY8 852 aaPredicted RBP9.39□□□□□ -0.91
ATM-208ENST00000525537 HINFPQ9BQA5 517 aa9.39□□□□□ -0.91
ATM-208ENST00000525537 M0R2N6 131 aa9.38□□□□□ -0.91
ATM-208ENST00000525537 WEE1P30291 646 aa9.38□□□□□ -0.91
ATM-208ENST00000525537 CCDC24Q8N4L8 307 aa9.38□□□□□ -0.91
ATM-208ENST00000525537 SEPT3Q9UH03 358 aa9.38□□□□□ -0.91
ATM-208ENST00000525537 DNMT3AQ9Y6K1 912 aaPredicted RBP9.38□□□□□ -0.91
ATM-208ENST00000525537 PTCD1O75127 700 aaKnown RBP9.37□□□□□ -0.91
ATM-208ENST00000525537 ADH1BP00325 375 aa9.37□□□□□ -0.91
ATM-208ENST00000525537 ARHGAP4P98171 946 aa9.37□□□□□ -0.91
ATM-208ENST00000525537 NBPF20Q3BBV1 942 aa9.37□□□□□ -0.91
ATM-208ENST00000525537 SLC10A4Q96EP9 437 aa9.37□□□□□ -0.91
ATM-208ENST00000525537 C8orf37Q96NL8 207 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms