RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 HMOX1P09601 288 aa15.98■□□□□ 0.15
LRRK1-202ENST00000525284 CCDC6Q16204 474 aa15.98■□□□□ 0.15
LRRK1-202ENST00000525284 ZNF76P36508 570 aa15.98■□□□□ 0.15
LRRK1-202ENST00000525284 SPDYE4A6NLX3 237 aa15.98■□□□□ 0.15
LRRK1-202ENST00000525284 ZSCAN12O43309 604 aa15.98■□□□□ 0.15
LRRK1-202ENST00000525284 KIF18AQ8NI77 898 aa15.98■□□□□ 0.15
LRRK1-202ENST00000525284 TRIM21P19474 475 aaKnown RBP15.97■□□□□ 0.15
LRRK1-202ENST00000525284 GNAI1P63096 354 aa15.97■□□□□ 0.15
LRRK1-202ENST00000525284 MAATS1Q7Z4T9 603 aa15.97■□□□□ 0.15
LRRK1-202ENST00000525284 DRC1Q96MC2 740 aa15.97■□□□□ 0.15
LRRK1-202ENST00000525284 SFPQP23246 707 aaKnown RBP eCLIP15.97■□□□□ 0.15
LRRK1-202ENST00000525284 CTNNA2P26232 953 aa15.96■□□□□ 0.15
LRRK1-202ENST00000525284 CACNA2D4Q7Z3S7 1137 aa15.96■□□□□ 0.15
LRRK1-202ENST00000525284 C1orf115Q9H7X2 142 aa15.96■□□□□ 0.15
LRRK1-202ENST00000525284 ANKRD1Q15327 319 aa15.96■□□□□ 0.15
LRRK1-202ENST00000525284 MXRA7P84157 204 aa15.96■□□□□ 0.14
LRRK1-202ENST00000525284 CCDC96Q2M329 555 aa15.96■□□□□ 0.14
LRRK1-202ENST00000525284 PPP4R3BQ5MIZ7 849 aa15.96■□□□□ 0.14
LRRK1-202ENST00000525284 ZSCAN30Q86W11 494 aa15.96■□□□□ 0.14
LRRK1-202ENST00000525284 PRKRIP1Q9H875 184 aaPredicted RBP15.96■□□□□ 0.14
LRRK1-202ENST00000525284 MINK1Q8N4C8 1332 aaPredicted RBP15.95■□□□□ 0.14
LRRK1-202ENST00000525284 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
LRRK1-202ENST00000525284 SYCE3A1L190 88 aa15.95■□□□□ 0.14
LRRK1-202ENST00000525284 PAFAH1B1P43034 410 aa15.95■□□□□ 0.14
LRRK1-202ENST00000525284 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
LRRK1-202ENST00000525284 K7ELQ4 463 aaPredicted RBP15.95■□□□□ 0.14
LRRK1-202ENST00000525284 KIF2AO00139 706 aaPredicted RBP15.95■□□□□ 0.14
LRRK1-202ENST00000525284 CCDC158Q5M9N0 1113 aa15.95■□□□□ 0.14
LRRK1-202ENST00000525284 ZNF428Q96B54 188 aa15.95■□□□□ 0.14
LRRK1-202ENST00000525284 RUNDC1Q96C34 613 aa15.95■□□□□ 0.14
LRRK1-202ENST00000525284 PPP1R14CQ8TAE6 165 aa15.94■□□□□ 0.14
LRRK1-202ENST00000525284 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.94■□□□□ 0.14
LRRK1-202ENST00000525284 TRMT1Q9NXH9 659 aaKnown RBP15.94■□□□□ 0.14
LRRK1-202ENST00000525284 PPP1R12BO60237 982 aaPredicted RBP15.94■□□□□ 0.14
LRRK1-202ENST00000525284 CNNM1Q9NRU3 951 aa15.94■□□□□ 0.14
LRRK1-202ENST00000525284 KLHL10Q6JEL2 608 aa15.94■□□□□ 0.14
LRRK1-202ENST00000525284 PDZRN3Q9UPQ7 1066 aa15.94■□□□□ 0.14
LRRK1-202ENST00000525284 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
LRRK1-202ENST00000525284 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
LRRK1-202ENST00000525284 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.93■□□□□ 0.14
LRRK1-202ENST00000525284 HSPA4P34932 840 aa15.93■□□□□ 0.14
LRRK1-202ENST00000525284 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
LRRK1-202ENST00000525284 FKBP15Q5T1M5 1219 aa15.93■□□□□ 0.14
LRRK1-202ENST00000525284 USP5P45974 858 aa15.93■□□□□ 0.14
LRRK1-202ENST00000525284 MAP3K11Q16584 847 aa15.93■□□□□ 0.14
LRRK1-202ENST00000525284 CPLX3Q8WVH0 158 aa15.92■□□□□ 0.14
LRRK1-202ENST00000525284 NACAP1Q9BZK3 213 aa15.92■□□□□ 0.14
LRRK1-202ENST00000525284 TAOK3Q9H2K8 898 aa15.92■□□□□ 0.14
LRRK1-202ENST00000525284 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
LRRK1-202ENST00000525284 RAB3IL1Q8TBN0 382 aa15.92■□□□□ 0.14
LRRK1-202ENST00000525284 BBXQ8WY36 941 aaPredicted RBP15.92■□□□□ 0.14
LRRK1-202ENST00000525284 PABPN1LA6NDY0 278 aaKnown RBP15.92■□□□□ 0.14
LRRK1-202ENST00000525284 UBA5Q9GZZ9 404 aa15.92■□□□□ 0.14
LRRK1-202ENST00000525284 PRPF4BQ13523 1007 aaKnown RBP15.91■□□□□ 0.14
LRRK1-202ENST00000525284 TSNARE1Q96NA8 513 aa15.91■□□□□ 0.14
LRRK1-202ENST00000525284 ANKRD30AQ9BXX3 1397 aa15.91■□□□□ 0.14
LRRK1-202ENST00000525284 RBM5P52756 815 aaKnown RBP eCLIP15.91■□□□□ 0.14
LRRK1-202ENST00000525284 VPS36Q86VN1 386 aa15.91■□□□□ 0.14
LRRK1-202ENST00000525284 RAPGEF4Q8WZA2 1011 aa15.91■□□□□ 0.14
LRRK1-202ENST00000525284 PSME1Q06323 249 aa15.91■□□□□ 0.14
LRRK1-202ENST00000525284 TOP1P11387 765 aaKnown RBP15.91■□□□□ 0.14
LRRK1-202ENST00000525284 TDRD12Q587J7 1177 aaKnown RBP15.91■□□□□ 0.14
LRRK1-202ENST00000525284 CEP112Q8N8E3 955 aa15.91■□□□□ 0.14
LRRK1-202ENST00000525284 WDR66Q8TBY9 1149 aa15.91■□□□□ 0.14
LRRK1-202ENST00000525284 SCLT1Q96NL6 688 aa15.9■□□□□ 0.14
LRRK1-202ENST00000525284 PAIP2Q9BPZ3 127 aaKnown RBP15.9■□□□□ 0.14
LRRK1-202ENST00000525284 CEP83Q9Y592 693 aa15.9■□□□□ 0.14
LRRK1-202ENST00000525284 NUP88Q99567 741 aaPredicted RBP15.9■□□□□ 0.14
LRRK1-202ENST00000525284 GNL3LQ9NVN8 582 aaKnown RBP15.9■□□□□ 0.14
LRRK1-202ENST00000525284 NOL3O60936 208 aaKnown RBP15.9■□□□□ 0.14
LRRK1-202ENST00000525284 IRX3P78415 501 aaPredicted RBP15.9■□□□□ 0.14
LRRK1-202ENST00000525284 C16orf45Q96MC5 204 aaPredicted RBP15.9■□□□□ 0.14
LRRK1-202ENST00000525284 SIL1Q9H173 461 aa15.9■□□□□ 0.14
LRRK1-202ENST00000525284 PDRG1Q9NUG6 133 aa15.9■□□□□ 0.14
LRRK1-202ENST00000525284 GNAI3P08754 354 aa15.9■□□□□ 0.14
LRRK1-202ENST00000525284 ARL1P40616 181 aaPredicted RBP15.9■□□□□ 0.14
LRRK1-202ENST00000525284 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
LRRK1-202ENST00000525284 SMARCA4P51532 1647 aa15.89■□□□□ 0.14
LRRK1-202ENST00000525284 USO1O60763 962 aaKnown RBP15.89■□□□□ 0.14
LRRK1-202ENST00000525284 LIG1P18858 919 aa15.89■□□□□ 0.14
LRRK1-202ENST00000525284 CDKL5O76039 1030 aa15.89■□□□□ 0.13
LRRK1-202ENST00000525284 PSMC4P43686 418 aa15.89■□□□□ 0.13
LRRK1-202ENST00000525284 CFAP58Q5T655 872 aa15.89■□□□□ 0.13
LRRK1-202ENST00000525284 RPUSD2Q8IZ73 545 aaKnown RBP15.89■□□□□ 0.13
LRRK1-202ENST00000525284 A0A1W2PRG0 241 aa15.89■□□□□ 0.13
LRRK1-202ENST00000525284 MSL1Q68DK7 614 aa15.89■□□□□ 0.13
LRRK1-202ENST00000525284 CEP57Q86XR8 500 aa15.89■□□□□ 0.13
LRRK1-202ENST00000525284 CLIP2Q9UDT6 1046 aa15.89■□□□□ 0.13
LRRK1-202ENST00000525284 RSPH14Q9UHP6 348 aa15.89■□□□□ 0.13
LRRK1-202ENST00000525284 TPD52P55327 224 aaPredicted RBP15.88■□□□□ 0.13
LRRK1-202ENST00000525284 TSG101Q99816 390 aa15.88■□□□□ 0.13
LRRK1-202ENST00000525284 NAA15Q9BXJ9 866 aaKnown RBP15.88■□□□□ 0.13
LRRK1-202ENST00000525284 DNAI2Q9GZS0 605 aa15.88■□□□□ 0.13
LRRK1-202ENST00000525284 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
LRRK1-202ENST00000525284 KIF6Q6ZMV9 814 aa15.88■□□□□ 0.13
LRRK1-202ENST00000525284 DDX46Q7L014 1031 aaKnown RBP15.88■□□□□ 0.13
LRRK1-202ENST00000525284 FAM114A1Q8IWE2 563 aa15.88■□□□□ 0.13
LRRK1-202ENST00000525284 JAKMIP1Q96N16 626 aaKnown RBP15.87■□□□□ 0.13
LRRK1-202ENST00000525284 UBAC1Q9BSL1 405 aa15.87■□□□□ 0.13
LRRK1-202ENST00000525284 IKBKGQ9Y6K9 419 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms