RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 AEBP1Q8IUX7 1158 aa10.43□□□□□ -0.74
NPAS4-202ENST00000524617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.43□□□□□ -0.74
NPAS4-202ENST00000524617 SULT6B1Q6IMI4 303 aa10.42□□□□□ -0.74
NPAS4-202ENST00000524617 RAPGEF4Q8WZA2 1011 aa10.42□□□□□ -0.74
NPAS4-202ENST00000524617 RSPH6AQ9H0K4 717 aa10.42□□□□□ -0.74
NPAS4-202ENST00000524617 CCER2I3L3R5 266 aa10.41□□□□□ -0.74
NPAS4-202ENST00000524617 FCHSD2O94868 740 aa10.41□□□□□ -0.74
NPAS4-202ENST00000524617 TATP17735 454 aaPredicted RBP10.41□□□□□ -0.74
NPAS4-202ENST00000524617 CCDC184Q52MB2 194 aa10.41□□□□□ -0.74
NPAS4-202ENST00000524617 BRWD3Q6RI45 1802 aa10.4□□□□□ -0.74
NPAS4-202ENST00000524617 U2SURPO15042 1029 aaKnown RBP10.4□□□□□ -0.74
NPAS4-202ENST00000524617 DDB1Q16531 1140 aa10.4□□□□□ -0.74
NPAS4-202ENST00000524617 PCDH11XQ9BZA7 1347 aa10.39□□□□□ -0.75
NPAS4-202ENST00000524617 PCDH11YQ9BZA8 1340 aa10.39□□□□□ -0.75
NPAS4-202ENST00000524617 ADAMTS7Q9UKP4 1686 aa10.39□□□□□ -0.75
NPAS4-202ENST00000524617 EXOC5O00471 708 aa10.39□□□□□ -0.75
NPAS4-202ENST00000524617 HMOX1P09601 288 aa10.39□□□□□ -0.75
NPAS4-202ENST00000524617 U2AF1L5P0DN76 240 aaPredicted RBP10.39□□□□□ -0.75
NPAS4-202ENST00000524617 U2AF1Q01081 240 aaKnown RBP eCLIP10.39□□□□□ -0.75
NPAS4-202ENST00000524617 AMOTQ4VCS5 1084 aa10.39□□□□□ -0.75
NPAS4-202ENST00000524617 ZCRB1Q8TBF4 217 aaKnown RBP10.39□□□□□ -0.75
NPAS4-202ENST00000524617 PNISRQ8TF01 805 aaKnown RBP10.39□□□□□ -0.75
NPAS4-202ENST00000524617 PLEKHF1Q96S99 279 aa10.39□□□□□ -0.75
NPAS4-202ENST00000524617 MRS2Q9HD23 443 aa10.39□□□□□ -0.75
NPAS4-202ENST00000524617 PRKAR2BP31323 418 aa10.38□□□□□ -0.75
NPAS4-202ENST00000524617 KRT27Q7Z3Y8 459 aa10.38□□□□□ -0.75
NPAS4-202ENST00000524617 MARCH10Q8NA82 808 aaPredicted RBP10.38□□□□□ -0.75
NPAS4-202ENST00000524617 CYP27B1O15528 508 aa10.37□□□□□ -0.75
NPAS4-202ENST00000524617 WDR43Q15061 677 aaKnown RBP eCLIP10.37□□□□□ -0.75
NPAS4-202ENST00000524617 NKX1-1Q15270 411 aaPredicted RBP10.37□□□□□ -0.75
NPAS4-202ENST00000524617 PLEKHO1Q53GL0 409 aaPredicted RBP10.37□□□□□ -0.75
NPAS4-202ENST00000524617 SPG7Q9UQ90 795 aa10.37□□□□□ -0.75
NPAS4-202ENST00000524617 MRC1P22897 1456 aa10.36□□□□□ -0.75
NPAS4-202ENST00000524617 KDM6AO15550 1401 aaPredicted RBP10.36□□□□□ -0.75
NPAS4-202ENST00000524617 A0A0G2JS52 829 aa10.36□□□□□ -0.75
NPAS4-202ENST00000524617 PHKG2P15735 406 aa10.36□□□□□ -0.75
NPAS4-202ENST00000524617 PDE3BQ13370 1112 aa10.36□□□□□ -0.75
NPAS4-202ENST00000524617 ILDR2Q71H61 639 aa10.36□□□□□ -0.75
NPAS4-202ENST00000524617 MIER1Q8N108 512 aa10.36□□□□□ -0.75
NPAS4-202ENST00000524617 PNNQ9H307 717 aaKnown RBP10.36□□□□□ -0.75
NPAS4-202ENST00000524617 ADAMTS8Q9UP79 889 aa10.36□□□□□ -0.75
NPAS4-202ENST00000524617 TOGARAM1Q9Y4F4 1720 aa10.36□□□□□ -0.75
NPAS4-202ENST00000524617 NHSQ6T4R5 1651 aa10.35□□□□□ -0.75
NPAS4-202ENST00000524617 MTHFSDQ2M296 383 aaKnown RBP10.35□□□□□ -0.75
NPAS4-202ENST00000524617 IFNL2Q8IZJ0 200 aa10.35□□□□□ -0.75
NPAS4-202ENST00000524617 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
NPAS4-202ENST00000524617 PHACTR3Q96KR7 559 aa10.35□□□□□ -0.75
NPAS4-202ENST00000524617 DOT1LQ8TEK3 1739 aa10.34□□□□□ -0.75
NPAS4-202ENST00000524617 AKAP4Q5JQC9 854 aa10.34□□□□□ -0.75
NPAS4-202ENST00000524617 ZNF530Q6P9A1 599 aaPredicted RBP10.34□□□□□ -0.75
NPAS4-202ENST00000524617 FAM196AQ6ZSG2 479 aa10.34□□□□□ -0.75
NPAS4-202ENST00000524617 RUNDC1Q96C34 613 aa10.34□□□□□ -0.75
NPAS4-202ENST00000524617 MAP3K5Q99683 1374 aa10.34□□□□□ -0.75
NPAS4-202ENST00000524617 HSP90AB1P08238 724 aaKnown RBP10.33□□□□□ -0.76
NPAS4-202ENST00000524617 CEMIPQ8WUJ3 1361 aa10.33□□□□□ -0.76
NPAS4-202ENST00000524617 TNS1Q9HBL0 1735 aaKnown RBP10.33□□□□□ -0.76
NPAS4-202ENST00000524617 MAPK8IP3Q9UPT6 1336 aa10.33□□□□□ -0.76
NPAS4-202ENST00000524617 HTATSF1O43719 755 aaKnown RBP10.32□□□□□ -0.76
NPAS4-202ENST00000524617 NFE2L2Q16236 605 aa10.32□□□□□ -0.76
NPAS4-202ENST00000524617 DDX54Q8TDD1 881 aaKnown RBP10.32□□□□□ -0.76
NPAS4-202ENST00000524617 DCAF5Q96JK2 942 aa10.32□□□□□ -0.76
NPAS4-202ENST00000524617 SBF2Q86WG5 1849 aa10.32□□□□□ -0.76
NPAS4-202ENST00000524617 SCN11AQ9UI33 1791 aa10.31□□□□□ -0.76
NPAS4-202ENST00000524617 NEFMP07197 916 aa10.31□□□□□ -0.76
NPAS4-202ENST00000524617 C1orf141Q5JVX7 400 aa10.31□□□□□ -0.76
NPAS4-202ENST00000524617 RGPD3A6NKT7 1758 aaPredicted RBP10.31□□□□□ -0.76
NPAS4-202ENST00000524617 RGPD4Q7Z3J3 1758 aa10.31□□□□□ -0.76
NPAS4-202ENST00000524617 GNAT3A8MTJ3 354 aa10.3□□□□□ -0.76
NPAS4-202ENST00000524617 ERVV-2B6SEH9 535 aa10.3□□□□□ -0.76
NPAS4-202ENST00000524617 TMPOP42166 694 aaKnown RBP10.3□□□□□ -0.76
NPAS4-202ENST00000524617 FAM182BQ5T319 152 aa10.3□□□□□ -0.76
NPAS4-202ENST00000524617 CCDC146Q8IYE0 955 aa10.3□□□□□ -0.76
NPAS4-202ENST00000524617 PAPPAQ13219 1627 aa10.29□□□□□ -0.76
NPAS4-202ENST00000524617 SIPA1L3O60292 1781 aaPredicted RBP10.29□□□□□ -0.76
NPAS4-202ENST00000524617 RNMTO43148 476 aaKnown RBP10.29□□□□□ -0.76
NPAS4-202ENST00000524617 BCL11BQ9C0K0 894 aaPredicted RBP10.29□□□□□ -0.76
NPAS4-202ENST00000524617 LMOD3Q0VAK6 560 aa10.28□□□□□ -0.76
NPAS4-202ENST00000524617 CCDC27Q2M243 656 aa10.28□□□□□ -0.76
NPAS4-202ENST00000524617 IL17REQ8NFR9 667 aa10.28□□□□□ -0.76
NPAS4-202ENST00000524617 DLG5Q8TDM6 1919 aa10.28□□□□□ -0.76
NPAS4-202ENST00000524617 CICQ96RK0 1608 aaPredicted RBP10.28□□□□□ -0.76
NPAS4-202ENST00000524617 EP400Q96L91 3159 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 APAF1O14727 1248 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 KCNQ2O43526 872 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 MPRIPQ6WCQ1 1025 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 CCDC125Q86Z20 511 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 FAM9BQ8IZU0 186 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 NGEFQ8N5V2 710 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 UPF1Q92900 1129 aaKnown RBP eCLIP10.27□□□□□ -0.77
NPAS4-202ENST00000524617 SLC52A2Q9HAB3 445 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 LGR6Q9HBX8 967 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 BTAF1O14981 1849 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 ITGB4P16144 1822 aa10.27□□□□□ -0.77
NPAS4-202ENST00000524617 TRIM37O94972 964 aa10.26□□□□□ -0.77
NPAS4-202ENST00000524617 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
NPAS4-202ENST00000524617 RIPK4P57078 832 aa10.26□□□□□ -0.77
NPAS4-202ENST00000524617 PTF1AQ7RTS3 328 aa10.26□□□□□ -0.77
NPAS4-202ENST00000524617 PIGBQ92521 554 aa10.26□□□□□ -0.77
NPAS4-202ENST00000524617 ACSBG1Q96GR2 724 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms