RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 ALYREFQ86V81 257 aaKnown RBP5.1□□□□□ -1.59
LINC01339-204ENST00000524094 PRR7Q8TB68 274 aa5.1□□□□□ -1.59
LINC01339-204ENST00000524094 GLMNQ92990 594 aa5.1□□□□□ -1.59
LINC01339-204ENST00000524094 SALL2Q9Y467 1007 aaPredicted RBP5.1□□□□□ -1.59
LINC01339-204ENST00000524094 ADH1CP00326 375 aa5.09□□□□□ -1.59
LINC01339-204ENST00000524094 NNTQ13423 1086 aa5.09□□□□□ -1.59
LINC01339-204ENST00000524094 NR6A1Q15406 480 aa5.09□□□□□ -1.59
LINC01339-204ENST00000524094 CFAP70Q5T0N1 1121 aa5.09□□□□□ -1.59
LINC01339-204ENST00000524094 RSPH4AQ5TD94 716 aa5.09□□□□□ -1.59
LINC01339-204ENST00000524094 LYPD8Q6UX82 237 aa5.09□□□□□ -1.59
LINC01339-204ENST00000524094 UCN2Q96RP3 112 aa5.09□□□□□ -1.59
LINC01339-204ENST00000524094 SOS2Q07890 1332 aaPredicted RBP5.08□□□□□ -1.6
LINC01339-204ENST00000524094 MMP16P51512 607 aa5.08□□□□□ -1.6
LINC01339-204ENST00000524094 DOC2BQ14184 412 aa5.08□□□□□ -1.6
LINC01339-204ENST00000524094 DESI1Q6ICB0 168 aa5.08□□□□□ -1.6
LINC01339-204ENST00000524094 CCDC155Q8N6L0 562 aa5.08□□□□□ -1.6
LINC01339-204ENST00000524094 OCSTAMPQ9BR26 566 aa5.08□□□□□ -1.6
LINC01339-204ENST00000524094 TRAIPQ9BWF2 469 aa5.08□□□□□ -1.6
LINC01339-204ENST00000524094 NDUFB9Q9Y6M9 179 aa5.08□□□□□ -1.6
LINC01339-204ENST00000524094 C1QTNF9BB2RNN3 333 aa5.07□□□□□ -1.6
LINC01339-204ENST00000524094 C6orf229H3BNL8 230 aa5.07□□□□□ -1.6
LINC01339-204ENST00000524094 F12P00748 615 aaPredicted RBP5.07□□□□□ -1.6
LINC01339-204ENST00000524094 BMP2P12643 396 aa5.07□□□□□ -1.6
LINC01339-204ENST00000524094 VAC14Q08AM6 782 aa5.07□□□□□ -1.6
LINC01339-204ENST00000524094 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.07□□□□□ -1.6
LINC01339-204ENST00000524094 RETREG3Q86VR2 466 aa5.07□□□□□ -1.6
LINC01339-204ENST00000524094 CCDC24Q8N4L8 307 aa5.07□□□□□ -1.6
LINC01339-204ENST00000524094 FMNL2Q96PY5 1086 aa5.07□□□□□ -1.6
LINC01339-204ENST00000524094 COL8A1P27658 744 aa5.06□□□□□ -1.6
LINC01339-204ENST00000524094 PODXL2Q9NZ53 605 aa5.06□□□□□ -1.6
LINC01339-204ENST00000524094 RETREG2Q8NC44 543 aa5.05□□□□□ -1.6
LINC01339-204ENST00000524094 CALR3Q96L12 384 aaKnown RBP5.05□□□□□ -1.6
LINC01339-204ENST00000524094 KLF16Q9BXK1 252 aaPredicted RBP5.05□□□□□ -1.6
LINC01339-204ENST00000524094 PPP1R12CQ9BZL4 782 aa5.05□□□□□ -1.6
LINC01339-204ENST00000524094 BCRP11274 1271 aa5.04□□□□□ -1.6
LINC01339-204ENST00000524094 ITGA6P23229 1130 aa5.04□□□□□ -1.6
LINC01339-204ENST00000524094 GRIPAP1Q4V328 841 aa5.04□□□□□ -1.6
LINC01339-204ENST00000524094 CCDC97Q96F63 343 aaPredicted RBP5.04□□□□□ -1.6
LINC01339-204ENST00000524094 CARNS1A5YM72 827 aa5.03□□□□□ -1.6
LINC01339-204ENST00000524094 PALM3A6NDB9 673 aaPredicted RBP5.03□□□□□ -1.6
LINC01339-204ENST00000524094 PPP1R15AO75807 674 aaPredicted RBP5.03□□□□□ -1.6
LINC01339-204ENST00000524094 UPP2O95045 317 aa5.03□□□□□ -1.6
LINC01339-204ENST00000524094 WASHC4Q2M389 1173 aa5.03□□□□□ -1.6
LINC01339-204ENST00000524094 CD163Q86VB7 1156 aa5.03□□□□□ -1.6
LINC01339-204ENST00000524094 HELBQ8NG08 1087 aaPredicted RBP5.03□□□□□ -1.6
LINC01339-204ENST00000524094 USB1Q9BQ65 265 aaKnown RBP5.03□□□□□ -1.6
LINC01339-204ENST00000524094 TFIP11Q9UBB9 837 aaKnown RBP5.03□□□□□ -1.6
LINC01339-204ENST00000524094 TLL2Q9Y6L7 1015 aa5.03□□□□□ -1.6
LINC01339-204ENST00000524094 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.02□□□□□ -1.61
LINC01339-204ENST00000524094 FBXO45P0C2W1 286 aa5.02□□□□□ -1.61
LINC01339-204ENST00000524094 PTCRAQ6ISU1 281 aaPredicted RBP5.02□□□□□ -1.61
LINC01339-204ENST00000524094 TBC1D9Q6ZT07 1266 aa5.02□□□□□ -1.61
LINC01339-204ENST00000524094 PHTF2Q8N3S3 785 aa5.02□□□□□ -1.61
LINC01339-204ENST00000524094 MAP10Q9P2G4 905 aa5.02□□□□□ -1.61
LINC01339-204ENST00000524094 SLC35F4A4IF30 521 aa5.01□□□□□ -1.61
LINC01339-204ENST00000524094 PIK3CDO00329 1044 aa5.01□□□□□ -1.61
LINC01339-204ENST00000524094 DXOO77932 396 aaKnown RBP5.01□□□□□ -1.61
LINC01339-204ENST00000524094 PDIA4P13667 645 aaKnown RBP5.01□□□□□ -1.61
LINC01339-204ENST00000524094 SNRPNP63162 240 aaKnown RBP5.01□□□□□ -1.61
LINC01339-204ENST00000524094 KANK4Q5T7N3 995 aaPredicted RBP5.01□□□□□ -1.61
LINC01339-204ENST00000524094 LINC00528Q8N1L1 170 aa5.01□□□□□ -1.61
LINC01339-204ENST00000524094 TSC1Q92574 1164 aa5.01□□□□□ -1.61
LINC01339-204ENST00000524094 ZFAND3Q9H8U3 227 aa5.01□□□□□ -1.61
LINC01339-204ENST00000524094 EVA1BQ9NVM1 165 aa5.01□□□□□ -1.61
LINC01339-204ENST00000524094 TMEM88BA6NKF7 163 aa5□□□□□ -1.61
LINC01339-204ENST00000524094 JUNDP17535 347 aa5□□□□□ -1.61
LINC01339-204ENST00000524094 LRP8Q14114 963 aa5□□□□□ -1.61
LINC01339-204ENST00000524094 GAS6Q14393 721 aa5□□□□□ -1.61
LINC01339-204ENST00000524094 Q3C1V9 767 aa5□□□□□ -1.61
LINC01339-204ENST00000524094 CHIC2Q9UKJ5 165 aa5□□□□□ -1.61
LINC01339-204ENST00000524094 ZIC2O95409 532 aaPredicted RBP4.99□□□□□ -1.61
LINC01339-204ENST00000524094 RFX1P22670 979 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 CHRNA4P43681 627 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 NR1H3Q13133 447 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 PTPRNQ16849 979 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 TSGA10IPQ3SY00 556 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 FAM174AQ8TBP5 190 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 PBXIP1Q96AQ6 731 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 PRM3Q9NNZ6 103 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 SLAIN2Q9P270 581 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 FKBPLQ9UIM3 349 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 MKL2Q9ULH7 1088 aa4.99□□□□□ -1.61
LINC01339-204ENST00000524094 MAFBQ9Y5Q3 323 aaPredicted RBP4.99□□□□□ -1.61
LINC01339-204ENST00000524094 COL17A1Q9UMD9 1497 aaPredicted RBP4.99□□□□□ -1.61
LINC01339-204ENST00000524094 GRIN2CQ14957 1233 aa4.98□□□□□ -1.61
LINC01339-204ENST00000524094 RSPO4Q2I0M5 234 aaPredicted RBP4.98□□□□□ -1.61
LINC01339-204ENST00000524094 CDCA8Q53HL2 280 aa4.98□□□□□ -1.61
LINC01339-204ENST00000524094 FIGNL2A6NMB9 653 aa4.97□□□□□ -1.61
LINC01339-204ENST00000524094 TTLL8A6PVC2 850 aa4.97□□□□□ -1.61
LINC01339-204ENST00000524094 HYAL3O43820 417 aaPredicted RBP4.97□□□□□ -1.61
LINC01339-204ENST00000524094 LMOD1P29536 600 aaPredicted RBP4.97□□□□□ -1.61
LINC01339-204ENST00000524094 KCNH2Q12809 1159 aa4.97□□□□□ -1.61
LINC01339-204ENST00000524094 CCER1Q8TC90 406 aaPredicted RBP4.97□□□□□ -1.61
LINC01339-204ENST00000524094 ZBBXA8MT70 800 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 DKK1O94907 266 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 ATG7O95352 703 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 SOX11P35716 441 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 SH3BP2P78314 561 aa4.96□□□□□ -1.62
LINC01339-204ENST00000524094 PHLDB3Q6NSJ2 640 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms