RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 ADAM32Q8TC27 787 aa9.43□□□□□ -0.9
PCM1-219ENST00000523540 TRIM52Q96A61 297 aa9.43□□□□□ -0.9
PCM1-219ENST00000523540 SLC10A4Q96EP9 437 aa9.43□□□□□ -0.9
PCM1-219ENST00000523540 ARHGEF15O94989 841 aa9.42□□□□□ -0.9
PCM1-219ENST00000523540 FBXO45P0C2W1 286 aa9.42□□□□□ -0.9
PCM1-219ENST00000523540 SEPT12Q8IYM1 358 aa9.42□□□□□ -0.9
PCM1-219ENST00000523540 FIGNL2A6NMB9 653 aa9.41□□□□□ -0.9
PCM1-219ENST00000523540 CBLBQ13191 982 aa9.41□□□□□ -0.9
PCM1-219ENST00000523540 PPP1R26Q5T8A7 1209 aaPredicted RBP9.41□□□□□ -0.9
PCM1-219ENST00000523540 MAGEB6P1A0A0J9YX57 407 aa9.4□□□□□ -0.9
PCM1-219ENST00000523540 WHAMMQ8TF30 809 aa9.4□□□□□ -0.9
PCM1-219ENST00000523540 ESPNB1AK53 854 aa9.39□□□□□ -0.91
PCM1-219ENST00000523540 VAC14Q08AM6 782 aa9.39□□□□□ -0.91
PCM1-219ENST00000523540 EIF4G2P78344 907 aaKnown RBP eCLIP9.38□□□□□ -0.91
PCM1-219ENST00000523540 SVOPQ8N4V2 548 aa9.38□□□□□ -0.91
PCM1-219ENST00000523540 CARD14Q9BXL6 1004 aa9.38□□□□□ -0.91
PCM1-219ENST00000523540 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
PCM1-219ENST00000523540 DNMT3AQ9Y6K1 912 aaPredicted RBP9.38□□□□□ -0.91
PCM1-219ENST00000523540 POM121CA8CG34 1229 aa9.37□□□□□ -0.91
PCM1-219ENST00000523540 ITGA6P23229 1130 aa9.37□□□□□ -0.91
PCM1-219ENST00000523540 DHX9Q08211 1270 aaKnown RBP9.37□□□□□ -0.91
PCM1-219ENST00000523540 DZIP3Q86Y13 1208 aaKnown RBP9.36□□□□□ -0.91
PCM1-219ENST00000523540 KCTD15Q96SI1 283 aaPredicted RBP9.35□□□□□ -0.91
PCM1-219ENST00000523540 ZNF777Q9ULD5 760 aaPredicted RBP9.35□□□□□ -0.91
PCM1-219ENST00000523540 IGHA1P01876 353 aa9.34□□□□□ -0.91
PCM1-219ENST00000523540 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
PCM1-219ENST00000523540 RNF20Q5VTR2 975 aa9.34□□□□□ -0.91
PCM1-219ENST00000523540 SV2AQ7L0J3 742 aa9.34□□□□□ -0.91
PCM1-219ENST00000523540 VWA5B2Q8N398 1253 aa9.34□□□□□ -0.91
PCM1-219ENST00000523540 SENP3-EIF4A1A0A087X0R7 540 aa9.33□□□□□ -0.92
PCM1-219ENST00000523540 SUPT5HO00267 1087 aaKnown RBP9.33□□□□□ -0.92
PCM1-219ENST00000523540 IRS1P35568 1242 aa9.33□□□□□ -0.92
PCM1-219ENST00000523540 KANK3Q6NY19 840 aa9.33□□□□□ -0.92
PCM1-219ENST00000523540 ADAMTS19Q8TE59 1207 aa9.32□□□□□ -0.92
PCM1-219ENST00000523540 ALG2Q9H553 416 aa9.32□□□□□ -0.92
PCM1-219ENST00000523540 ARID3CA6NKF2 412 aa9.31□□□□□ -0.92
PCM1-219ENST00000523540 INTS6LQ5JSJ4 861 aaKnown RBP9.31□□□□□ -0.92
PCM1-219ENST00000523540 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
PCM1-219ENST00000523540 AGBL1Q96MI9 1066 aa9.31□□□□□ -0.92
PCM1-219ENST00000523540 C1orf115Q9H7X2 142 aa9.31□□□□□ -0.92
PCM1-219ENST00000523540 PCDHB9Q9Y5E1 797 aa9.31□□□□□ -0.92
PCM1-219ENST00000523540 CDC14CA4D256 554 aa9.3□□□□□ -0.92
PCM1-219ENST00000523540 FOXK2Q01167 660 aa9.3□□□□□ -0.92
PCM1-219ENST00000523540 GPAT2Q6NUI2 795 aa9.3□□□□□ -0.92
PCM1-219ENST00000523540 INSM2Q96T92 566 aaPredicted RBP9.3□□□□□ -0.92
PCM1-219ENST00000523540 CHIC2Q9UKJ5 165 aa9.3□□□□□ -0.92
PCM1-219ENST00000523540 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
PCM1-219ENST00000523540 GLMNQ92990 594 aa9.29□□□□□ -0.92
PCM1-219ENST00000523540 ADAMTS2O95450 1211 aa9.28□□□□□ -0.92
PCM1-219ENST00000523540 SEMA3FQ13275 785 aa9.28□□□□□ -0.92
PCM1-219ENST00000523540 LYPD4Q6UWN0 246 aa9.28□□□□□ -0.92
PCM1-219ENST00000523540 NFATC2IPQ8NCF5 419 aa9.28□□□□□ -0.92
PCM1-219ENST00000523540 SCARF2Q96GP6 870 aaPredicted RBP9.28□□□□□ -0.92
PCM1-219ENST00000523540 CEP126Q9P2H0 1117 aa9.28□□□□□ -0.92
PCM1-219ENST00000523540 MARSP56192 900 aaKnown RBP9.27□□□□□ -0.93
PCM1-219ENST00000523540 RELBQ01201 579 aa9.27□□□□□ -0.93
PCM1-219ENST00000523540 SRSF11Q05519 484 aaKnown RBP9.26□□□□□ -0.93
PCM1-219ENST00000523540 GAS6Q14393 721 aa9.26□□□□□ -0.93
PCM1-219ENST00000523540 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
PCM1-219ENST00000523540 PHTF2Q8N3S3 785 aa9.26□□□□□ -0.93
PCM1-219ENST00000523540 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
PCM1-219ENST00000523540 CALR3Q96L12 384 aaKnown RBP9.25□□□□□ -0.93
PCM1-219ENST00000523540 POLMQ9NP87 494 aaPredicted RBP9.25□□□□□ -0.93
PCM1-219ENST00000523540 LZTS3O60299 673 aaPredicted RBP9.24□□□□□ -0.93
PCM1-219ENST00000523540 CELA2BP08218 269 aaPredicted RBP9.24□□□□□ -0.93
PCM1-219ENST00000523540 MAP7D1Q3KQU3 841 aa9.24□□□□□ -0.93
PCM1-219ENST00000523540 GIGYF1O75420 1035 aaPredicted RBP9.23□□□□□ -0.93
PCM1-219ENST00000523540 ADH1AP07327 375 aa9.23□□□□□ -0.93
PCM1-219ENST00000523540 ERVK-9P63128 1117 aa9.23□□□□□ -0.93
PCM1-219ENST00000523540 ZNF395Q9H8N7 513 aaPredicted RBP9.23□□□□□ -0.93
PCM1-219ENST00000523540 TMPRSS4Q9NRS4 437 aa9.23□□□□□ -0.93
PCM1-219ENST00000523540 CUEDC1Q9NWM3 386 aaPredicted RBP9.23□□□□□ -0.93
PCM1-219ENST00000523540 ERVH48-1M5A8F1 160 aa9.22□□□□□ -0.93
PCM1-219ENST00000523540 LILRA1O75019 489 aa9.22□□□□□ -0.93
PCM1-219ENST00000523540 UCN2Q96RP3 112 aa9.22□□□□□ -0.93
PCM1-219ENST00000523540 ADD1P35611 737 aaKnown RBP9.21□□□□□ -0.94
PCM1-219ENST00000523540 SLFNL1Q499Z3 407 aa9.21□□□□□ -0.94
PCM1-219ENST00000523540 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.94
PCM1-219ENST00000523540 ITGB2P05107 769 aa9.2□□□□□ -0.94
PCM1-219ENST00000523540 PTGIRP43119 386 aa9.2□□□□□ -0.94
PCM1-219ENST00000523540 MAP3K10Q02779 954 aa9.2□□□□□ -0.94
PCM1-219ENST00000523540 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
PCM1-219ENST00000523540 PIK3CDO00329 1044 aa9.19□□□□□ -0.94
PCM1-219ENST00000523540 CC2D2BQ6DHV5 1058 aa9.19□□□□□ -0.94
PCM1-219ENST00000523540 RNF135Q8IUD6 432 aa9.19□□□□□ -0.94
PCM1-219ENST00000523540 CCDC82Q8N4S0 544 aa9.19□□□□□ -0.94
PCM1-219ENST00000523540 SERPINA10Q9UK55 444 aa9.19□□□□□ -0.94
PCM1-219ENST00000523540 PLA2G4EQ3MJ16 856 aa9.18□□□□□ -0.94
PCM1-219ENST00000523540 LYSMD3Q7Z3D4 306 aa9.18□□□□□ -0.94
PCM1-219ENST00000523540 ZNF837Q96EG3 531 aaPredicted RBP9.17□□□□□ -0.94
PCM1-219ENST00000523540 GMCL1Q96IK5 515 aa9.17□□□□□ -0.94
PCM1-219ENST00000523540 PPP1R12CQ9BZL4 782 aa9.17□□□□□ -0.94
PCM1-219ENST00000523540 MBIPQ9NS73 344 aa9.17□□□□□ -0.94
PCM1-219ENST00000523540 ADAM23O75077 832 aa9.16□□□□□ -0.94
PCM1-219ENST00000523540 TSGA10IPQ3SY00 556 aa9.16□□□□□ -0.94
PCM1-219ENST00000523540 XP32Q5T750 250 aa9.16□□□□□ -0.94
PCM1-219ENST00000523540 TBC1D9Q6ZT07 1266 aa9.16□□□□□ -0.94
PCM1-219ENST00000523540 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
PCM1-219ENST00000523540 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
PCM1-219ENST00000523540 DCAF5Q96JK2 942 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms