RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 MARCH10Q8NA82 808 aaPredicted RBP15.97■□□□□ 0.15
PVT1-215ENST00000522963 DDX54Q8TDD1 881 aaKnown RBP15.96■□□□□ 0.15
PVT1-215ENST00000522963 RAPGEF4Q8WZA2 1011 aa15.96■□□□□ 0.15
PVT1-215ENST00000522963 OVOS2A0A0G2JMS6 1433 aa15.95■□□□□ 0.14
PVT1-215ENST00000522963 TATP17735 454 aaPredicted RBP15.95■□□□□ 0.14
PVT1-215ENST00000522963 TNS2Q63HR2 1409 aa15.94■□□□□ 0.14
PVT1-215ENST00000522963 EYA1Q99502 592 aa15.94■□□□□ 0.14
PVT1-215ENST00000522963 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
PVT1-215ENST00000522963 MEGF6O75095 1541 aa15.94■□□□□ 0.14
PVT1-215ENST00000522963 BAG6P46379 1132 aa15.93■□□□□ 0.14
PVT1-215ENST00000522963 PNISRQ8TF01 805 aaKnown RBP15.93■□□□□ 0.14
PVT1-215ENST00000522963 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
PVT1-215ENST00000522963 U2SURPO15042 1029 aaKnown RBP15.92■□□□□ 0.14
PVT1-215ENST00000522963 APBA3O96018 575 aa15.92■□□□□ 0.14
PVT1-215ENST00000522963 ZCRB1Q8TBF4 217 aaKnown RBP15.92■□□□□ 0.14
PVT1-215ENST00000522963 ACSBG1Q96GR2 724 aa15.92■□□□□ 0.14
PVT1-215ENST00000522963 EN1Q05925 392 aaPredicted RBP15.91■□□□□ 0.14
PVT1-215ENST00000522963 IGSF1Q8N6C5 1336 aa15.91■□□□□ 0.14
PVT1-215ENST00000522963 SBF2Q86WG5 1849 aa15.9■□□□□ 0.14
PVT1-215ENST00000522963 U2AF1L5P0DN76 240 aaPredicted RBP15.9■□□□□ 0.14
PVT1-215ENST00000522963 U2AF1Q01081 240 aaKnown RBP eCLIP15.9■□□□□ 0.14
PVT1-215ENST00000522963 WDR43Q15061 677 aaKnown RBP eCLIP15.9■□□□□ 0.14
PVT1-215ENST00000522963 TNS1Q9HBL0 1735 aaKnown RBP15.89■□□□□ 0.13
PVT1-215ENST00000522963 PTF1AQ7RTS3 328 aa15.89■□□□□ 0.13
PVT1-215ENST00000522963 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
PVT1-215ENST00000522963 ADAMTS8Q9UP79 889 aa15.89■□□□□ 0.13
PVT1-215ENST00000522963 HMOX1P09601 288 aa15.88■□□□□ 0.13
PVT1-215ENST00000522963 AEBP1Q8IUX7 1158 aa15.88■□□□□ 0.13
PVT1-215ENST00000522963 KCNQ2O43526 872 aa15.87■□□□□ 0.13
PVT1-215ENST00000522963 EZH2Q15910 746 aaKnown RBP15.87■□□□□ 0.13
PVT1-215ENST00000522963 SULT6B1Q6IMI4 303 aa15.87■□□□□ 0.13
PVT1-215ENST00000522963 SYTL4Q96C24 671 aaPredicted RBP15.87■□□□□ 0.13
PVT1-215ENST00000522963 EP400Q96L91 3159 aa15.87■□□□□ 0.13
PVT1-215ENST00000522963 NCAPD2Q15021 1401 aa15.86■□□□□ 0.13
PVT1-215ENST00000522963 BCL11BQ9C0K0 894 aaPredicted RBP15.86■□□□□ 0.13
PVT1-215ENST00000522963 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
PVT1-215ENST00000522963 SHANK3Q9BYB0 1731 aa15.85■□□□□ 0.13
PVT1-215ENST00000522963 SPG7Q9UQ90 795 aa15.85■□□□□ 0.13
PVT1-215ENST00000522963 PCDH11XQ9BZA7 1347 aa15.85■□□□□ 0.13
PVT1-215ENST00000522963 PCDH11YQ9BZA8 1340 aa15.85■□□□□ 0.13
PVT1-215ENST00000522963 KDRP35968 1356 aa15.85■□□□□ 0.13
PVT1-215ENST00000522963 FCHSD2O94868 740 aa15.84■□□□□ 0.13
PVT1-215ENST00000522963 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
PVT1-215ENST00000522963 CAMKK2Q96RR4 588 aa15.83■□□□□ 0.12
PVT1-215ENST00000522963 CYP27B1O15528 508 aa15.82■□□□□ 0.12
PVT1-215ENST00000522963 PRIM1P49642 420 aaKnown RBP15.82■□□□□ 0.12
PVT1-215ENST00000522963 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
PVT1-215ENST00000522963 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
PVT1-215ENST00000522963 BCL9O00512 1426 aa15.82■□□□□ 0.12
PVT1-215ENST00000522963 DOT1LQ8TEK3 1739 aa15.82■□□□□ 0.12
PVT1-215ENST00000522963 PLEKHO1Q53GL0 409 aaPredicted RBP15.81■□□□□ 0.12
PVT1-215ENST00000522963 NHSQ6T4R5 1651 aa15.81■□□□□ 0.12
PVT1-215ENST00000522963 PKD1L3Q7Z443 1732 aa15.81■□□□□ 0.12
PVT1-215ENST00000522963 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
PVT1-215ENST00000522963 BTAF1O14981 1849 aa15.8■□□□□ 0.12
PVT1-215ENST00000522963 IFNL2Q8IZJ0 200 aa15.79■□□□□ 0.12
PVT1-215ENST00000522963 RUNDC1Q96C34 613 aa15.79■□□□□ 0.12
PVT1-215ENST00000522963 PHACTR3Q96KR7 559 aa15.79■□□□□ 0.12
PVT1-215ENST00000522963 PNNQ9H307 717 aaKnown RBP15.79■□□□□ 0.12
PVT1-215ENST00000522963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.121e-11■□□□□ 9.9
PVT1-215ENST00000522963 PSDA5PKW4 1024 aaPredicted RBP15.77■□□□□ 0.12
PVT1-215ENST00000522963 PLSCR1O15162 318 aa15.77■□□□□ 0.12
PVT1-215ENST00000522963 PHKG2P15735 406 aa15.77■□□□□ 0.12
PVT1-215ENST00000522963 AMOTQ4VCS5 1084 aa15.77■□□□□ 0.12
PVT1-215ENST00000522963 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.12
PVT1-215ENST00000522963 MPRIPQ6WCQ1 1025 aa15.77■□□□□ 0.12
PVT1-215ENST00000522963 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
PVT1-215ENST00000522963 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
PVT1-215ENST00000522963 APAF1O14727 1248 aa15.75■□□□□ 0.11
PVT1-215ENST00000522963 NEFMP07197 916 aa15.75■□□□□ 0.11
PVT1-215ENST00000522963 TXNRD1Q16881 649 aa15.75■□□□□ 0.11
PVT1-215ENST00000522963 MTHFSDQ2M296 383 aaKnown RBP15.75■□□□□ 0.11
PVT1-215ENST00000522963 ITGB4P16144 1822 aa15.75■□□□□ 0.11
PVT1-215ENST00000522963 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
PVT1-215ENST00000522963 RREB1Q92766 1687 aa15.74■□□□□ 0.11
PVT1-215ENST00000522963 R3HDM1Q15032 1099 aaKnown RBP15.74■□□□□ 0.11
PVT1-215ENST00000522963 NBPF14Q5TI25 921 aa15.74■□□□□ 0.11
PVT1-215ENST00000522963 NUP188Q5SRE5 1749 aa15.74■□□□□ 0.11
PVT1-215ENST00000522963 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
PVT1-215ENST00000522963 TMPOP42166 694 aaKnown RBP15.73■□□□□ 0.11
PVT1-215ENST00000522963 NKX1-1Q15270 411 aaPredicted RBP15.73■□□□□ 0.11
PVT1-215ENST00000522963 NFE2L2Q16236 605 aa15.73■□□□□ 0.11
PVT1-215ENST00000522963 PROM2Q8N271 834 aa15.73■□□□□ 0.11
PVT1-215ENST00000522963 RRP7AQ9Y3A4 280 aaKnown RBP15.73■□□□□ 0.11
PVT1-215ENST00000522963 RGPD3A6NKT7 1758 aaPredicted RBP15.72■□□□□ 0.11
PVT1-215ENST00000522963 RGPD4Q7Z3J3 1758 aa15.72■□□□□ 0.11
PVT1-215ENST00000522963 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
PVT1-215ENST00000522963 KCNQ4P56696 695 aa15.72■□□□□ 0.11
PVT1-215ENST00000522963 GAS2L2Q8NHY3 880 aa15.72■□□□□ 0.11
PVT1-215ENST00000522963 TMOD3Q9NYL9 352 aa15.72■□□□□ 0.11
PVT1-215ENST00000522963 PIGBQ92521 554 aa15.71■□□□□ 0.11
PVT1-215ENST00000522963 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
PVT1-215ENST00000522963 DCAF5Q96JK2 942 aa15.7■□□□□ 0.1
PVT1-215ENST00000522963 RIPK4P57078 832 aa15.69■□□□□ 0.1
PVT1-215ENST00000522963 CABP4P57796 275 aa15.69■□□□□ 0.1
PVT1-215ENST00000522963 HNRNPUQ00839 825 aaKnown RBP eCLIP15.69■□□□□ 0.11e-6■■■■□ 21.2
PVT1-215ENST00000522963 AKAP4Q5JQC9 854 aa15.69■□□□□ 0.1
PVT1-215ENST00000522963 STK32BQ9NY57 414 aa15.69■□□□□ 0.1
PVT1-215ENST00000522963 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
PVT1-215ENST00000522963 ANO8Q9HCE9 1232 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms