RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 SSH1Q8WYL5 1049 aa12.44□□□□□ -0.42
SPARC-205ENST00000522348 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
SPARC-205ENST00000522348 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
SPARC-205ENST00000522348 PXDNQ92626 1479 aa12.44□□□□□ -0.42
SPARC-205ENST00000522348 HSPA1LP34931 641 aa12.43□□□□□ -0.42
SPARC-205ENST00000522348 AXIN2Q9Y2T1 843 aa12.43□□□□□ -0.42
SPARC-205ENST00000522348 PHRF1Q9P1Y6 1649 aaKnown RBP12.42□□□□□ -0.42
SPARC-205ENST00000522348 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
SPARC-205ENST00000522348 USHBP1Q8N6Y0 703 aa12.42□□□□□ -0.42
SPARC-205ENST00000522348 ALS2Q96Q42 1657 aa12.42□□□□□ -0.42
SPARC-205ENST00000522348 KIF16BQ96L93 1317 aa12.41□□□□□ -0.42
SPARC-205ENST00000522348 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
SPARC-205ENST00000522348 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
SPARC-205ENST00000522348 CABLES1Q8TDN4 633 aa12.41□□□□□ -0.42
SPARC-205ENST00000522348 ARHGAP45Q92619 1136 aa12.41□□□□□ -0.42
SPARC-205ENST00000522348 LRRC59Q96AG4 307 aaKnown RBP12.41□□□□□ -0.42
SPARC-205ENST00000522348 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
SPARC-205ENST00000522348 CPDO75976 1380 aa12.41□□□□□ -0.42
SPARC-205ENST00000522348 KIAA0232Q92628 1395 aa12.41□□□□□ -0.42
SPARC-205ENST00000522348 CRB1P82279 1406 aa12.4□□□□□ -0.42
SPARC-205ENST00000522348 ATF7IPQ6VMQ6 1270 aa12.4□□□□□ -0.42
SPARC-205ENST00000522348 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
SPARC-205ENST00000522348 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
SPARC-205ENST00000522348 PANK1Q8TE04 598 aa12.4□□□□□ -0.42
SPARC-205ENST00000522348 NOB1Q9ULX3 412 aaKnown RBP12.4□□□□□ -0.42
SPARC-205ENST00000522348 MAP3K5Q99683 1374 aa12.4□□□□□ -0.42
SPARC-205ENST00000522348 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
SPARC-205ENST00000522348 LTN1O94822 1766 aa12.39□□□□□ -0.43
SPARC-205ENST00000522348 AKAP4Q5JQC9 854 aa12.39□□□□□ -0.43
SPARC-205ENST00000522348 IL17REQ8NFR9 667 aa12.39□□□□□ -0.43
SPARC-205ENST00000522348 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
SPARC-205ENST00000522348 ROBO1Q9Y6N7 1651 aa12.38□□□□□ -0.43
SPARC-205ENST00000522348 ERBB3P21860 1342 aa12.38□□□□□ -0.43
SPARC-205ENST00000522348 NCAPD2Q15021 1401 aa12.38□□□□□ -0.43
SPARC-205ENST00000522348 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
SPARC-205ENST00000522348 CSB-PGBD3P0DP91 1061 aa12.38□□□□□ -0.43
SPARC-205ENST00000522348 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
SPARC-205ENST00000522348 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
SPARC-205ENST00000522348 CHMP4BQ9H444 224 aaKnown RBP12.38□□□□□ -0.43
SPARC-205ENST00000522348 NLRP2Q9NX02 1062 aa12.38□□□□□ -0.43
SPARC-205ENST00000522348 TSPYL4Q9UJ04 414 aa12.38□□□□□ -0.43
SPARC-205ENST00000522348 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
SPARC-205ENST00000522348 TATP17735 454 aaPredicted RBP12.37□□□□□ -0.43
SPARC-205ENST00000522348 C1orf141Q5JVX7 400 aa12.37□□□□□ -0.43
SPARC-205ENST00000522348 ZNF530Q6P9A1 599 aaPredicted RBP12.37□□□□□ -0.43
SPARC-205ENST00000522348 CENPQQ7L2Z9 268 aaPredicted RBP12.37□□□□□ -0.43
SPARC-205ENST00000522348 RAPGEF4Q8WZA2 1011 aa12.37□□□□□ -0.43
SPARC-205ENST00000522348 CLUAP1Q96AJ1 413 aa12.37□□□□□ -0.43
SPARC-205ENST00000522348 CHMP4AQ9BY43 222 aa12.37□□□□□ -0.43
SPARC-205ENST00000522348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
SPARC-205ENST00000522348 ABCC6O95255 1503 aa12.37□□□□□ -0.43
SPARC-205ENST00000522348 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
SPARC-205ENST00000522348 TRIM27P14373 513 aa12.36□□□□□ -0.43
SPARC-205ENST00000522348 MVPQ14764 893 aaKnown RBP12.36□□□□□ -0.43
SPARC-205ENST00000522348 API5Q9BZZ5 524 aaKnown RBP12.36□□□□□ -0.43
SPARC-205ENST00000522348 PRDM11Q9NQV5 511 aa12.36□□□□□ -0.43
SPARC-205ENST00000522348 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
SPARC-205ENST00000522348 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
SPARC-205ENST00000522348 DLG5Q8TDM6 1919 aa12.35□□□□□ -0.43
SPARC-205ENST00000522348 RLBP1P12271 317 aa12.35□□□□□ -0.43
SPARC-205ENST00000522348 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
SPARC-205ENST00000522348 MIS18AQ9NYP9 233 aa12.35□□□□□ -0.43
SPARC-205ENST00000522348 TEFQ10587 303 aa12.34□□□□□ -0.43
SPARC-205ENST00000522348 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
SPARC-205ENST00000522348 CEMIPQ8WUJ3 1361 aa12.33□□□□□ -0.44
SPARC-205ENST00000522348 RNMTO43148 476 aaKnown RBP12.33□□□□□ -0.44
SPARC-205ENST00000522348 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
SPARC-205ENST00000522348 TNNQ9UQP3 1299 aa12.33□□□□□ -0.44
SPARC-205ENST00000522348 KDM2BQ8NHM5 1336 aa12.33□□□□□ -0.44
SPARC-205ENST00000522348 TCERG1O14776 1098 aaKnown RBP12.32□□□□□ -0.44
SPARC-205ENST00000522348 EVA1CP58658 441 aa12.32□□□□□ -0.44
SPARC-205ENST00000522348 CCDC30Q5VVM6 783 aa12.32□□□□□ -0.44
SPARC-205ENST00000522348 MPRIPQ6WCQ1 1025 aa12.32□□□□□ -0.44
SPARC-205ENST00000522348 RWDD1Q9H446 243 aaPredicted RBP12.32□□□□□ -0.44
SPARC-205ENST00000522348 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
SPARC-205ENST00000522348 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
SPARC-205ENST00000522348 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
SPARC-205ENST00000522348 ITPRIPQ8IWB1 547 aa12.31□□□□□ -0.44
SPARC-205ENST00000522348 IFNL2Q8IZJ0 200 aa12.31□□□□□ -0.44
SPARC-205ENST00000522348 TMEM57Q8N5G2 664 aa12.31□□□□□ -0.44
SPARC-205ENST00000522348 PTPRCP08575 1304 aa12.31□□□□□ -0.44
SPARC-205ENST00000522348 WDR17Q8IZU2 1322 aa12.31□□□□□ -0.44
SPARC-205ENST00000522348 COL18A1P39060 1754 aa12.3□□□□□ -0.44
SPARC-205ENST00000522348 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
SPARC-205ENST00000522348 KRT24Q2M2I5 525 aa12.3□□□□□ -0.44
SPARC-205ENST00000522348 TOM1L2Q6ZVM7 507 aa12.3□□□□□ -0.44
SPARC-205ENST00000522348 CARD10Q9BWT7 1032 aa12.3□□□□□ -0.44
SPARC-205ENST00000522348 STK31Q9BXU1 1019 aa12.3□□□□□ -0.44
SPARC-205ENST00000522348 JCADQ9P266 1359 aa12.3□□□□□ -0.44
SPARC-205ENST00000522348 OVOS2A0A0G2JMS6 1433 aa12.29□□□□□ -0.44
SPARC-205ENST00000522348 HOXB7P09629 217 aa12.29□□□□□ -0.44
SPARC-205ENST00000522348 PHKG2P15735 406 aa12.29□□□□□ -0.44
SPARC-205ENST00000522348 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
SPARC-205ENST00000522348 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
SPARC-205ENST00000522348 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
SPARC-205ENST00000522348 ZBTB7BO15156 539 aaPredicted RBP12.28□□□□□ -0.44
SPARC-205ENST00000522348 IGHDP01880 384 aa12.28□□□□□ -0.44
SPARC-205ENST00000522348 EIF4A1P60842 406 aaKnown RBP12.28□□□□□ -0.44
SPARC-205ENST00000522348 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
SPARC-205ENST00000522348 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms